* using log directory ‘/srv/hornik/tmp/CRAN/bartMan.Rcheck’
* using R Under development (unstable) (2024-04-02 r86265)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 17.0.6 (5)
    Debian flang-new version 17.0.6 (5)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘bartMan/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘bartMan’ version ‘0.1.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/4s] NOTE
Maintainer: ‘Alan Inglis <alan.inglis@mu.ie>’

New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘bartMan’ can be installed ... [9s/9s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [2s/2s] OK
* checking whether the package can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the package can be unloaded cleanly ... [2s/2s] OK
* checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK
* checking whether the namespace can be unloaded cleanly ... [2s/2s] OK
* checking loading without being on the library search path ... [2s/2s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for apparent methods not registered:
viviPlot:
  function(matrix, intPal, impPal, intLims, impLims, uncIntLims,
           uncImpLims, unc_levels, max_desat, pow_desat, max_light,
           pow_light, angle, border, label, ...)
viviPlot.standardMat:
  function(matrix, intPal, impPal, intLims, impLims, uncIntLims,
           uncImpLims, angle, border, unc_levels, max_desat, pow_desat,
           max_light, pow_light, label, ...)

viviPlot:
  function(matrix, intPal, impPal, intLims, impLims, uncIntLims,
           uncImpLims, unc_levels, max_desat, pow_desat, max_light,
           pow_light, angle, border, label, ...)
viviPlot.quantiles:
  function(matrixList, intPal, impPal, intLims, impLims, uncIntLims,
           uncImpLims, angle, border, unc_levels, max_desat, pow_desat,
           max_light, pow_light, label, ...)
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [15s/15s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [5s/5s] OK
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [1s/1s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs