downloading reverse dependencies ... downloading geomander_2.5.0.tar.gz ... ok installing dependencies ‘baf’, ‘censable’, ‘dataverse’, ‘redist’, ‘tinytiger’ also installing the dependencies ‘censusapi’, ‘redistmetrics’ begin installing package ‘censusapi’ begin installing package ‘redistmetrics’ begin installing package ‘baf’ begin installing package ‘dataverse’ begin installing package ‘tinytiger’ * installing *source* package ‘censusapi’ ... ** this is package ‘censusapi’ version ‘0.9.0’ ** package ‘censusapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (censusapi) * installing *source* package ‘tinytiger’ ... ** this is package ‘tinytiger’ version ‘0.0.10’ ** package ‘tinytiger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytiger) begin installing package ‘censable’ * installing *source* package ‘baf’ ... ** this is package ‘baf’ version ‘0.0.4’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (baf) * installing *source* package ‘dataverse’ ... ** this is package ‘dataverse’ version ‘0.3.15’ ** package ‘dataverse’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dataverse) * installing *source* package ‘censable’ ... ** this is package ‘censable’ version ‘0.0.8’ ** package ‘censable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (censable) * installing *source* package ‘redistmetrics’ ... ** this is package ‘redistmetrics’ version ‘1.0.9’ ** package ‘redistmetrics’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYZ4Tvx/R.INSTALLd54c0508c1f6/redistmetrics/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c compactness.cpp -o compactness.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c competitiveness.cpp -o competitiveness.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c contiguity.cpp -o contiguity.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c distances.cpp -o distances.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c kirchhoff.cpp -o kirchhoff.o In file included from kirchhoff.cpp:2: ../inst/include/kirchhoff_inline.h: In function ‘double log_st_distr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’: ../inst/include/kirchhoff_inline.h:25:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 25 | if (districts(i, idx) == district && counties(i) == county) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ ../inst/include/kirchhoff_inline.h:25:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 25 | if (districts(i, idx) == district && counties(i) == county) { | ~~~~~~~~~~~~^~~~~~~~~ ../inst/include/kirchhoff_inline.h:34:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 34 | if (districts(i, idx) != district || counties(i) != county) continue; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ ../inst/include/kirchhoff_inline.h:34:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 34 | if (districts(i, idx) != district || counties(i) != county) continue; | ~~~~~~~~~~~~^~~~~~~~~ ../inst/include/kirchhoff_inline.h:43:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue; | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ ../inst/include/kirchhoff_inline.h:43:62: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue; | ~~~~~~~~~~~~~~~^~~~~~~~~ ../inst/include/kirchhoff_inline.h: In function ‘double log_st_contr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’: ../inst/include/kirchhoff_inline.h:70:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 70 | if (districts(i, idx) != district) continue; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ ../inst/include/kirchhoff_inline.h:85:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 85 | if (districts(i, idx) != district) continue; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ ../inst/include/kirchhoff_inline.h:93:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 93 | if (districts(nbor, idx) != district || pos.at(nbor) == cty) continue; | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ kirchhoff.cpp: In function ‘Rcpp::NumericVector n_removed(const Graph&, const arma::umat&, int)’: kirchhoff.cpp:43:36: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 43 | if (districts(nbors[j], n) != dist) removed += 1.0; | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c partisan.cpp -o partisan.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c reindex.cpp -o reindex.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c segregation.cpp -o segregation.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c splits.cpp -o splits.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c tally.cpp -o tally.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c varinfo.cpp -o varinfo.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o redistmetrics.so RcppExports.o compactness.o competitiveness.o contiguity.o distances.o kirchhoff.o partisan.o reindex.o segregation.o splits.o tally.o varinfo.o -latomic -lpthread -latomic -lpthread -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYZ4Tvx/R.INSTALLd54c0508c1f6/redistmetrics/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-redistmetrics/00new/redistmetrics/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (redistmetrics) begin installing package ‘redist’ * installing *source* package ‘redist’ ... ** this is package ‘redist’ version ‘4.3.1’ ** package ‘redist’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-4) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYkpLiT/R.INSTALLd5775358d4fab/redist/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c adj_reduce.cpp -o adj_reduce.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c check_contiguity.cpp -o check_contiguity.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c coarsen.cpp -o coarsen.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c coloring.cpp -o coloring.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c compact_vectorized.cpp -o compact_vectorized.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c constraint_calc_helper.cpp -o constraint_calc_helper.o constraint_calc_helper.cpp: In function ‘arma::uvec getIn(arma::ivec, arma::ivec)’: constraint_calc_helper.cpp:107:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 107 | for(i = 0; i < vec1.n_elem; i++){ | ~~^~~~~~~~~~~~~ constraint_calc_helper.cpp:109:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 109 | for(j = 0; j < vec2.n_elem; j++){ | ~~^~~~~~~~~~~~~ constraint_calc_helper.cpp: In function ‘arma::uvec get_in_index(arma::vec, arma::vec)’: constraint_calc_helper.cpp:125:16: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 125 | for(i = 0; i < vec1.n_elem; i++){ | ~~^~~~~~~~~~~~~ constraint_calc_helper.cpp:127:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 127 | for(j = 0; j < vec2.n_elem; j++){ | ~~^~~~~~~~~~~~~ constraint_calc_helper.cpp:124:22: warning: variable ‘match’ set but not used [-Wunused-but-set-variable] 124 | int i; int j; bool match; arma::uvec store_in(vec1.n_elem); | ^~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c contiguity.cpp -o contiguity.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c cores.cpp -o cores.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c crsg.cpp -o crsg.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c distance_helpers.cpp -o distance_helpers.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c kirchhoff.cpp -o kirchhoff.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c make_swaps_helper.cpp -o make_swaps_helper.o make_swaps_helper.cpp: In function ‘Rcpp::NumericVector distParity(Rcpp::NumericMatrix, Rcpp::NumericVector)’: make_swaps_helper.cpp:412:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare] 412 | for(int k = 0; k < assignments.size(); k++){ | ~~^~~~~~~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c map_calc.cpp -o map_calc.o map_calc.cpp: In function ‘double log_boundary(const Graph&, const arma::subview_col&, int, int)’: map_calc.cpp:16:26: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 16 | if (districts(i) != distr_root) continue; // same side of boundary as root | ~~~~~~~~~~~~~^~~~~~~~~~~~~ map_calc.cpp:18:33: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 18 | if (districts(nbor) != distr_other) | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~ map_calc.cpp: In function ‘double eval_sq_entropy(const arma::subview_col&, const arma::uvec&, int, const arma::uvec&, int, int, int)’: map_calc.cpp:38:28: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 38 | if (current[k] != j) continue; map_calc.cpp:41:30: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 41 | if (districts[k] == distr) | ~~~~~~~~~~~~~^~~~~~~~ map_calc.cpp: In function ‘double eval_inc(const arma::subview_col&, int, const arma::uvec&)’: map_calc.cpp:114:42: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 114 | if (districts[incumbents[i] - 1] == distr) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ map_calc.cpp: In function ‘double eval_polsby(const arma::subview_col&, int, const arma::ivec&, const arma::ivec&, const arma::vec&, const arma::vec&)’: map_calc.cpp:242:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare] 242 | for (int e = 0; e < idx.size(); e++) { | ~~^~~~~~~~~~~~ map_calc.cpp:246:41: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 246 | if (districts(from(idx(e))) != distr) { | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ map_calc.cpp: In function ‘double eval_fry_hold(const arma::subview_col&, int, const arma::uvec&, arma::mat, double)’: map_calc.cpp:264:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare] 264 | for (int i = 0; i < idxs.size() - 1; i++) { | ~~^~~~~~~~~~~~~~~~~ map_calc.cpp:265:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘arma::uword’ {aka ‘long long unsigned int’} [-Wsign-compare] 265 | for (int k = i + 1; k < idxs.size(); k++) { | ~~^~~~~~~~~~~~~ map_calc.cpp: In function ‘double eval_grp_hinge(const arma::subview_col&, int, const arma::vec&, const arma::uvec&, const arma::uvec&)’: map_calc.cpp:71:43: warning: ‘target’ may be used uninitialized [-Wmaybe-uninitialized] 71 | return std::sqrt(std::max(0.0, target - frac)); | ~~~~~~~^~~~~~ map_calc.cpp:60:12: note: ‘target’ was declared here 60 | double target; | ^~~~~~ map_calc.cpp: In function ‘double eval_grp_inv_hinge(const arma::subview_col&, int, const arma::vec&, const arma::uvec&, const arma::uvec&)’: map_calc.cpp:93:41: warning: ‘target’ may be used uninitialized [-Wmaybe-uninitialized] 93 | return std::sqrt(std::max(0.0, frac - target)); | ~~~~~^~~~~~~~ map_calc.cpp:82:12: note: ‘target’ was declared here 82 | double target; | ^~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c mcmc_gibbs.cpp -o mcmc_gibbs.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c merge_split.cpp -o merge_split.o In file included from merge_split.h:14, from merge_split.cpp:9: /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h: In function ‘double log_st_distr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’: /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:25:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 25 | if (districts(i, idx) == district && counties(i) == county) { | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:25:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 25 | if (districts(i, idx) == district && counties(i) == county) { | ~~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:34:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 34 | if (districts(i, idx) != district || counties(i) != county) continue; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:34:54: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 34 | if (districts(i, idx) != district || counties(i) != county) continue; | ~~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:43:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue; | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:43:62: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 43 | if (districts(nbor, idx) != district || counties(nbor) != county) continue; | ~~~~~~~~~~~~~~~^~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h: In function ‘double log_st_contr(const Graph&, const arma::umat&, const arma::uvec&, int, int, int)’: /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:70:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 70 | if (districts(i, idx) != district) continue; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:85:27: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 85 | if (districts(i, idx) != district) continue; | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include/kirchhoff_inline.h:93:32: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 93 | if (districts(nbor, idx) != district || pos.at(nbor) == cty) continue; | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ merge_split.cpp: In function ‘double split_map_ms(const Graph&, Tree&, const arma::uvec&, Multigraph&, arma::subview_col, int, int, std::vector&, std::vector&, const arma::uvec&, double, double, double, int)’: merge_split.cpp:186:26: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 186 | if (districts(i) == distr_1 || districts(i) == distr_2) { | ~~~~~~~~~~~~~^~~~~~~~~~ merge_split.cpp:186:53: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 186 | if (districts(i) == distr_1 || districts(i) == distr_2) { | ~~~~~~~~~~~~~^~~~~~~~~~ merge_split.cpp: In function ‘bool cut_districts_ms(Tree&, int, int, arma::subview_col&, int, int, const arma::uvec&, double, double, double, double)’: merge_split.cpp:230:26: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 230 | if (districts(i) != distr_root || i == root) continue; | ~~~~~~~~~~~~~^~~~~~~~~~~~~ merge_split.cpp: In function ‘void adapt_ms_parameters(const Graph&, int, int&, double, double, const arma::uvec&, const arma::uvec&, Multigraph&, const arma::uvec&, double)’: merge_split.cpp:299:25: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 299 | if (plan(j) == distr_1 || plan(j) == distr_2) { | ~~~~~~~~^~~~~~~~~~ merge_split.cpp:299:47: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 299 | if (plan(j) == distr_1 || plan(j) == distr_2) { | ~~~~~~~~^~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c pareto.cpp -o pareto.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c pop_helpers.cpp -o pop_helpers.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c random.cpp -o random.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c renumber.cpp -o renumber.o In file included from renumber.cpp:4: hungarian.h: In member function ‘void HungarianAlgorithm::assignmentoptimal(int*, double*, double*, int, int)’: hungarian.h:169:21: warning: this ‘if’ clause does not guard... [-Wmisleading-indentation] 169 | if (fabs(distMatrix[row + nOfRows*col]) < DBL_EPSILON) | ^~ hungarian.h:177:25: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘if’ 177 | for (row = 0; row&, int, const arma::uvec&, double, double, double, double)’: smc.cpp:528:30: warning: comparison of integer expressions of different signedness: ‘long long unsigned int’ and ‘int’ [-Wsign-compare] 528 | if (districts(i - 1) != distr_root || i - 1 == root) continue; | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c smc_base.cpp -o smc_base.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c splits.cpp -o splits.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c sw_mh_alg.cpp -o sw_mh_alg.o sw_mh_alg.cpp: In function ‘Rcpp::List vector_to_list(arma::uvec)’: sw_mh_alg.cpp:26:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 26 | for(int i = 0; i < vecname.n_elem; i++) { | ~~^~~~~~~~~~~~~~~~ sw_mh_alg.cpp: In function ‘arma::uvec get_not_in(arma::uvec, arma::uvec)’: sw_mh_alg.cpp:35:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 35 | for(i = 0; i < vec1.n_elem; i++) { | ~~^~~~~~~~~~~~~ sw_mh_alg.cpp: In function ‘Rcpp::List swMH(Rcpp::List, Rcpp::NumericVector, Rcpp::NumericVector, int, Rcpp::List, double, double, Rcpp::NumericVector, Rcpp::NumericVector, int, double, std::string, int, int, int, int, int, int, int, bool)’: sw_mh_alg.cpp:365:37: warning: ‘start_anneal’ may be used uninitialized [-Wmaybe-uninitialized] 365 | if ((k >= start_anneal) & (k < start_cold)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ sw_mh_alg.cpp:131:9: note: ‘start_anneal’ was declared here 131 | int start_anneal; | ^~~~~~~~~~~~ sw_mh_alg.cpp:365:37: warning: ‘start_cold’ may be used uninitialized [-Wmaybe-uninitialized] 365 | if ((k >= start_anneal) & (k < start_cold)) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ sw_mh_alg.cpp:132:9: note: ‘start_cold’ was declared here 132 | int start_cold; | ^~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c sw_mh_helper.cpp -o sw_mh_helper.o sw_mh_helper.cpp: In function ‘Rcpp::NumericVector init_pop(Rcpp::NumericVector, arma::vec)’: sw_mh_helper.cpp:42:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 42 | for(j = 0; j < cd_i_ind.n_elem; j++){ | ~~^~~~~~~~~~~~~~~~~ sw_mh_helper.cpp: In function ‘int count_valid(Rcpp::List, Rcpp::List, Rcpp::NumericVector)’: sw_mh_helper.cpp:309:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const long long unsigned int’} [-Wsign-compare] 309 | for(j = 0; j < find_cds.n_elem; j++){ | ~~^~~~~~~~~~~~~~~~~ sw_mh_helper.cpp: In function ‘Rcpp::List changeBeta(arma::vec, double, double, Rcpp::NumericVector, int)’: sw_mh_helper.cpp:793:70: warning: ‘wj’ may be used uninitialized [-Wmaybe-uninitialized] 793 | double mhprobGT = (double)exp(-1 * constraint * (propBeta - beta)) * wj / wi * qji / qij; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ sw_mh_helper.cpp:737:10: note: ‘wj’ was declared here 737 | double wj; | ^~ sw_mh_helper.cpp:793:61: warning: ‘propBeta’ may be used uninitialized [-Wmaybe-uninitialized] 793 | double mhprobGT = (double)exp(-1 * constraint * (propBeta - beta)) * wj / wi * qji / qij; | ~~~~~~~~~~^~~~~~~ sw_mh_helper.cpp:738:10: note: ‘propBeta’ was declared here 738 | double propBeta; | ^~~~~~~~ sw_mh_helper.cpp: In function ‘Rcpp::List make_swaps(Rcpp::List, Rcpp::List, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::NumericVector, Rcpp::List, Rcpp::CharacterVector, double, double, double, int, double, double, const Graph&)’: sw_mh_helper.cpp:599:16: warning: ‘curr_cd’ may be used uninitialized [-Wmaybe-uninitialized] 599 | cd_pair(0) = curr_cd; | ~~~~~~~~~~~^~~~~~~~~ sw_mh_helper.cpp:473:9: note: ‘curr_cd’ was declared here 473 | int curr_cd; | ^~~~~~~ sw_mh_helper.cpp:600:16: warning: ‘prop_cd’ may be used uninitialized [-Wmaybe-uninitialized] 600 | cd_pair(1) = prop_cd; | ~~~~~~~~~~~^~~~~~~~~ sw_mh_helper.cpp:474:9: note: ‘prop_cd’ was declared here 474 | int prop_cd; | ^~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c tree_op.cpp -o tree_op.o tree_op.cpp: In function ‘int find_subroot(const Tree&, const std::vector&)’: tree_op.cpp:186:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 186 | for (int k = 0; k < nbors->size(); k++) { | ~~^~~~~~~~~~~~~~~ g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c varinfo.cpp -o varinfo.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppThread/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/cli/include' -I'/home/hornik/tmp/CRAN_recheck/Library/redistmetrics/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -DARMA_64BIT_WORD=1 -g0 -fpic -g -O2 -Wall -pedantic -mtune=native -c wilson.cpp -o wilson.o wilson.cpp: In function ‘int walk_until(const Graph&, int, std::vector >&, int, const std::vector&, const std::vector&, const arma::uvec&)’: wilson.cpp:208:52: warning: comparison of integer expressions of different signedness: ‘const long long unsigned int’ and ‘int’ [-Wsign-compare] 208 | if (ignore[proposal] || counties[proposal] != county) { g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o redist.so RcppExports.o adj_reduce.o check_contiguity.o coarsen.o coloring.o compact_vectorized.o constraint_calc_helper.o contiguity.o cores.o crsg.o distance_helpers.o kirchhoff.o make_swaps_helper.o map_calc.o mcmc_gibbs.o merge_split.o pareto.o pop_helpers.o random.o renumber.o rsg.o scorer_helpers.o shatter_search.o smc.o smc_base.o splits.o sw_mh_alg.o sw_mh_helper.o tree_op.o varinfo.o wilson.o -latomic -lpthread -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYkpLiT/R.INSTALLd5775358d4fab/redist/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-redist/00new/redist/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (redist) checking baf_0.0.4.tar.gz ... checking geomander_2.5.0.tar.gz ... Depends: Package: baf Depends: R (>= 4.2.0) Imports: cli, curl, dplyr, fs, glue, readr Timings: user system elapsed baf 27.395 3.81 33.017 Results: Check status summary: OK Source packages 1 Reverse depends 1 Check results summary: baf ... OK rdepends_geomander ... OK