* installing *source* package ‘babelmixr2’ ...
** using staged installation
--------[begin src/Makevars]--------
# -*- mode: makefile-gmake -*-
ARMA=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`
RCPP=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`
EG=`"$(R_HOME)/bin$(R_ARCH_BIN)/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`

PKG_LIBS = $(LAPACK_LIBS) $(BLAS_LIBS) $(FLIBS)
PKG_CXXFLAGS = -Id -isystem"$(EG)" -isystem"$(RCPP)" -isystem"$(ARMA)"
SHLIB_LDFLAGS = $(SHLIB_CXXLDFLAGS) 
SHLIB_LD = $(SHLIB_CXXLD)

--------[end src/Makevars]--------
** libs
using C compiler: ‘Debian clang version 17.0.5 (1)’
using C++ compiler: ‘Debian clang version 17.0.5 (1)’
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2parse/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -Id -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fpic  -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2parse/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -Id -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fpic  -g -O3 -Wall -pedantic -c classicReverse.cpp -o classicReverse.o
clang-17  -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2parse/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang++-17  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/rxode2parse/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3  -Id -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppEigen"),"include"))'`" -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("Rcpp"),"include"))'`" -isystem"`"/home/hornik/tmp/R/bin/Rscript" -e 'cat(file.path(find.package("RcppArmadillo"),"include"))'`" -fpic  -g -O3 -Wall -pedantic -c transform.cpp -o transform.o
clang++-17 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o babelmixr2.so RcppExports.o classicReverse.o init.o transform.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/llvm-17/lib -lFortran_main -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/babelmixr2.Rcheck/00LOCK-babelmixr2/00new/babelmixr2/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (babelmixr2)