downloading reverse dependencies ‘BBEST’, ‘dti’, ‘fmri’, ‘qMRI’ trying URL 'file:///data/Repositories/CRAN/src/contrib/BBEST_0.1-8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dti_1.5.4.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/fmri_1.9.12.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/qMRI_1.2.7.9.tar.gz' installing dependencies ‘adimpro’, ‘aws’, ‘awsMethods’, ‘oro.dicom’ begin installing package ‘awsMethods’ begin installing package ‘oro.dicom’ * installing *source* package ‘awsMethods’ ... ** this is package ‘awsMethods’ version ‘1.1-1’ ** package ‘awsMethods’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-16 (Debian 16.1.0-2) 16.1.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUvXHDn/R.INSTALL137000daf7d75/awsMethods/src' gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c omp_funcs.c -o omp_funcs.o omp_funcs.c: In function ‘getNumThreads’: omp_funcs.c:29:15: warning: ‘master’ construct deprecated since OpenMP 5.1, use ‘masked’ [-Wdeprecated-openmp] 29 | #pragma omp master | ^~~ gcc-16 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o awsMethods.so init.o omp_funcs.o -fopenmp -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUvXHDn/R.INSTALL137000daf7d75/awsMethods/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-awsMethods/00new/awsMethods/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (awsMethods) begin installing package ‘aws’ begin installing package ‘adimpro’ * installing *source* package ‘oro.dicom’ ... ** this is package ‘oro.dicom’ version ‘0.5.3’ ** package ‘oro.dicom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (oro.dicom) * installing *source* package ‘adimpro’ ... ** this is package ‘adimpro’ version ‘0.9.7.2’ ** package ‘adimpro’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-16 (Debian 16.1.0-2) 16.1.0’ using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-2) 16.1.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppTREqt/R.INSTALL13706a795b271d/adimpro/src' gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rentries.c -o Rentries.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c aniso.f -o aniso.o aniso.f:206:64: 206 | integer i1,i2,j1,j2,ja1,je1,ja2,je2,l,k,n,info,kdv,jx,jy,i, | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c awsimage.f -o awsimage.o awsimage.f:254:72: 254 | thnew(k,i1,i2)=FLOOR(swjy(k,thrednr)/swj) | ^ Warning: ‘thrednr’ may be used uninitialized [-Wmaybe-uninitialized] awsimage.f:198:41: 198 | integer ih,ih1,ii,i1,i2,j1,j2,k,n,thrednr, | ^~~~~~~ note: ‘thrednr’ was declared here gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c awspimage.f -o awspimage.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c demosaic.f -o demosaic.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c edges.f -o edges.o gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c misc.f -o misc.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c segment.f -o segment.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c shrink.f -o shrink.o shrink.f:279:72: 279 | call median3(z(1,1,thrednr),k,yy,tol) | ^ Warning: ‘thrednr’ may be used uninitialized [-Wmaybe-uninitialized] shrink.f:205:56: 205 | integer iy1,iy2,ja1,ja2,je1,je2,jx1,jx2,k,method,thrednr | ^~~~~~~ note: ‘thrednr’ was declared here shrink.f:190:72: 190 | call median1(z(1,thrednr),k,yy,tol) | ^ Warning: ‘thrednr’ may be used uninitialized [-Wmaybe-uninitialized] shrink.f:131:56: 131 | integer iy1,iy2,ja1,ja2,je1,je2,jx1,jx2,k,method,thrednr | ^~~~~~~ note: ‘thrednr’ was declared here gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c smsensor.f -o smsensor.o gcc-16 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o adimpro.so Rentries.o aniso.o awsimage.o awspimage.o demosaic.o edges.o init.o misc.o segment.o shrink.o smsensor.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-16/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppTREqt/R.INSTALL13706a795b271d/adimpro/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-adimpro/00new/adimpro/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (adimpro) * installing *source* package ‘aws’ ... ** this is package ‘aws’ version ‘2.5-7’ ** using staged installation ** libs using C compiler: ‘gcc-16 (Debian 16.1.0-2) 16.1.0’ using Fortran compiler: ‘GNU Fortran (Debian 16.1.0-2) 16.1.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQrkCZp/R.INSTALL13706876a330dd/aws/src' gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c ICIsmooth.f -o ICIsmooth.o gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rentries.c -o Rentries.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c awslp.f -o awslp.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c awswghts.f -o awswghts.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c caws.f -o caws.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c cawsmask.f -o cawsmask.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c esiglike.f -o esiglike.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c estimateComplexSigma.f -o estimateComplexSigma.o gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c misc.f -o misc.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c nlmeans.f -o nlmeans.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c pcaws.f -o pcaws.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c segment.f -o segment.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c smooth3d.f -o smooth3d.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c smse3.f -o smse3.o gfortran-16 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -c varest.f -o varest.o gcc-16 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o aws.so ICIsmooth.o Rentries.o awslp.o awswghts.o caws.o cawsmask.o esiglike.o estimateComplexSigma.o init.o misc.o nlmeans.o pcaws.o segment.o smooth3d.o smse3.o varest.o -fopenmp -llapack -L/home/hornik/tmp/R-d-gcc-16/lib -lRblas -lgfortran -lm -latomic_asneeded -lquadmath -lgfortran -lm -latomic_asneeded -lquadmath -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQrkCZp/R.INSTALL13706876a330dd/aws/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-aws/00new/aws/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aws) checking aws_2.5-7.tar.gz ... checking BBEST_0.1-8.tar.gz ... checking dti_1.5.4.3.tar.gz ... checking qMRI_1.2.7.9.tar.gz ... checking fmri_1.9.12.1.tar.gz ... Depends: Package: aws Depends: R (>= 3.4.0), awsMethods (>= 1.1-1) Imports: methods, gsl Timings: user system elapsed aws 63.923 5.343 69.438 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 2 2 Check results summary: aws ... OK rdepends_BBEST ... NOTE * checking Rd files ... [0s/0s] NOTE * checking Rd contents ... NOTE rdepends_dti ... OK rdepends_fmri ... OK rdepends_qMRI ... NOTE * checking re-building of vignette outputs ... [19s/44s] NOTE Check results changes: Package: BBEST Check: CRAN incoming feasibility Old result: NOTE