R Under development (unstable) (2024-06-20 r86796 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(avidaR) > > test_check("avidaR") [ FAIL 0 | WARN 0 | SKIP 29 | PASS 30 ] ══ Skipped tests (29) ══════════════════════════════════════════════════════════ • On CRAN (29): 'test_get_db_summary.R:3:3', 'test_get_docker_image_from_experiment_id.R:3:3', 'test_get_doi_from_experiment_id.R:3:3', 'test_get_experiment_id_from_organism_id.R:3:3', 'test_get_genome_id_from_genome_seq.R:3:3', 'test_get_genome_id_from_logic_operation.R:3:3', 'test_get_genome_id_from_phenotype_id.R:3:3', 'test_get_genome_id_from_transcriptome_id.R:3:3', 'test_get_genome_id_of_wild_type_organisms.R:3:3', 'test_get_genome_seq_from_genome_id.R:3:3', 'test_get_logic_operation_from_phenotype_id.R:3:3', 'test_get_mutant_at_pos.R:3:3', 'test_get_phenotype_id_from_genome_id.R:3:3', 'test_get_phenotype_id_from_genome_seq.R:3:3', 'test_get_phenotype_id_from_logic_operation.R:3:3', 'test_get_phenotype_id_from_transcriptome_id.R:3:3', 'test_get_tandem_id_from_genome_id.R:3:3', 'test_get_tandem_id_from_genome_seq.R:3:3', 'test_get_tandem_id_from_logic_operation.R:3:3', 'test_get_tandem_id_from_phenotype_id.R:3:3', 'test_get_tandem_seq_from_tandem_id.R:3:3', 'test_get_transcriptome_id_from_genome_id.R:3:3', 'test_get_transcriptome_id_from_genome_seq.R:3:3', 'test_get_transcriptome_id_from_logic_operation.R:3:3', 'test_get_transcriptome_id_from_phenotype_id.R:3:3', 'test_get_transcriptome_seq_from_transcriptome_id.R:3:3', 'test_ontology.R:3:3', 'test_plot_transcriptome.R:3:3', 'test_set_access_options.R:5:3' [ FAIL 0 | WARN 0 | SKIP 29 | PASS 30 ] > > proc.time() user system elapsed 2.34 0.23 2.56