* installing *source* package ‘automerge’ ... ** this is package ‘automerge’ version ‘0.2.0’ ** using staged installation Checking for system automerge installation... System automerge not found, building from bundled source... Building automerge-c... using Rust package manager: 'cargo 1.91.1 (ea2d97820 2025-10-10) (built from a source tarball)' using Rust compiler: 'rustc 1.91.1 (ed61e7d7e 2025-11-07) (built from a source tarball)' Extracting vendored Rust dependencies... -- The C compiler identification is Clang 21.1.8 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/clang-21 - skipped -- Detecting C compile features -- Detecting C compile features - done -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Configuring done (1.2s) -- Generating done (0.0s) -- Build files have been written to: /srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build Building (this may take several minutes)... [ 12%] Producing the bindings' artifacts with Cargo... -- Touching "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/automerge-c/cbindgen.toml" if NOT_EXISTS "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/include/automerge-c/automerge.h"... -- Touched "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/automerge-c/cbindgen.toml". warning: profiles for the non root package will be ignored, specify profiles at the workspace root: package: /srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/hexane/Cargo.toml workspace: /srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/Cargo.toml Compiling proc-macro2 v1.0.106 Compiling unicode-ident v1.0.22 Compiling quote v1.0.43 Compiling serde_core v1.0.228 Compiling serde v1.0.228 Compiling libc v0.2.180 Compiling typenum v1.19.0 Compiling syn v2.0.114 Compiling cfg-if v1.0.4 Compiling version_check v0.9.5 Compiling generic-array v0.14.7 Compiling autocfg v1.5.0 Compiling indexmap v1.9.3 Compiling serde_derive v1.0.228 Compiling zerocopy v0.8.33 Compiling getrandom v0.3.4 Compiling zmij v1.0.16 Compiling rustix v1.1.3 Compiling hashbrown v0.12.3 Compiling serde_json v1.0.149 Compiling syn v1.0.109 Compiling bitflags v2.10.0 Compiling linux-raw-sys v0.11.0 Compiling os_str_bytes v6.6.1 Compiling clap_lex v0.2.4 Compiling getrandom v0.2.17 Compiling atty v0.2.14 Compiling thiserror v2.0.18 Compiling termcolor v1.4.1 Compiling bitflags v1.3.2 Compiling textwrap v0.16.2 Compiling fastrand v2.3.0 Compiling once_cell v1.21.3 Compiling cbindgen v0.26.0 Compiling memchr v2.7.6 Compiling strsim v0.10.0 Compiling crc32fast v1.5.0 Compiling itoa v1.0.17 Compiling clap v3.2.25 Compiling tempfile v3.24.0 Compiling ppv-lite86 v0.2.21 Compiling toml v0.5.11 Compiling rand_core v0.6.4 Compiling block-buffer v0.10.4 Compiling crypto-common v0.1.7 Compiling thiserror-impl v2.0.18 Compiling simd-adler32 v0.3.8 Compiling adler2 v2.0.1 Compiling heck v0.4.1 Compiling log v0.4.29 Compiling tracing-core v0.1.36 Compiling miniz_oxide v0.8.9 Compiling digest v0.10.7 Compiling rand_chacha v0.3.1 Compiling tracing-attributes v0.1.31 Compiling cpufeatures v0.2.17 Compiling either v1.15.0 Compiling pin-project-lite v0.2.16 Compiling leb128 v0.2.5 Compiling tinyvec_macros v0.1.1 Compiling itertools v0.14.0 Compiling tinyvec v1.10.0 Compiling hexane v0.1.7 (/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/hexane) Compiling tracing v0.1.44 Compiling sha2 v0.10.9 Compiling automerge-c v0.3.0 (/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/automerge-c) Compiling flate2 v1.1.8 Compiling rand v0.8.5 Compiling smol_str v0.2.2 Compiling unicode-segmentation v1.12.0 Compiling rustc-hash v2.1.1 Compiling hex v0.4.3 Compiling automerge v0.7.3 (/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/src/automerge/rust/automerge) Finished `release` profile [optimized] target(s) in 1m 41s -- Replacing "A_M([^_]+)_" with "AM_\1_" in "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/include/automerge-c/automerge.h"... -- Created/updated "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/include/automerge-c/automerge.h". -- Replacing "USIZE_" with "+8" in "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/include/automerge-c/automerge.h"... -- Created/updated "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/include/automerge-c/automerge.h". [ 12%] Built target automerge_core_artifacts [ 25%] Generating the enum string functions with CMake... -- Generating header file "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/include/automerge-c/utils/enum_string.h"... -- Generating source file "/srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/src/utils/enum_string.c"... [ 37%] Building C object CMakeFiles/automerge.dir/src/utils/result.c.o [ 50%] Building C object CMakeFiles/automerge.dir/src/utils/stack_callback_data.c.o [ 62%] Building C object CMakeFiles/automerge.dir/src/utils/stack.c.o [ 75%] Building C object CMakeFiles/automerge.dir/src/utils/string.c.o [ 87%] Building C object CMakeFiles/automerge.dir/src/utils/enum_string.c.o [100%] Linking C static library libautomerge.a Merging the libraries' constituent object files... Merging its dependent libraries into /srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/libautomerge.a... /usr/bin/llvm-ar-21 -x /srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00_pkg_src/automerge/am-build/Cargo/target/x86_64-unknown-linux-gnu/release/libautomerge_core.a /usr/bin/llvm-ar-21 -rs libautomerge.a objects/automerge_core/*.o [100%] Built target automerge [ 12%] Built target automerge_core_artifacts [100%] Built target automerge Install the project... -- Install configuration: "Release" Successfully built automerge-c from source Configuration: PKG_CFLAGS: -I../am-install/include PKG_LIBS: ../am-install/lib/libautomerge.a -pthread -ldl -lm -lrt ** libs using C compiler: ‘Debian clang version 21.1.8 (1+b1)’ clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c cursors.c -o cursors.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c document.c -o document.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c errors.c -o errors.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c memory.c -o memory.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c objects.c -o objects.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../am-install/include -fpic -g -O3 -Wall -pedantic -c sync.c -o sync.o clang-21 -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o automerge.so cursors.o document.o errors.o init.o memory.o objects.o sync.o ../am-install/lib/libautomerge.a -pthread -ldl -lm -lrt -L/home/hornik/tmp/R-d-clang-21/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/automerge.Rcheck/00LOCK-automerge/00new/automerge/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (automerge)