context("auk_select") skip_on_cran() skip_on_os("windows") test_that("auk_select works on ebd", { # columns cols <- c("latitude", "LONGITUDE", "group_identifier", "sampling event identifier", "scientific name", "observation count") f <- system.file("extdata/ebd-sample.txt", package = "auk") tmp <- tempfile() ebd <- auk_ebd(f) %>% auk_select(select = cols, file = tmp) %>% read_ebd(unique = FALSE) unlink(tmp) expect_is(ebd, "data.frame") expect_equal(ncol(ebd), length(cols)) # raise an error cols <- "wrong column name" tmp <- tempfile() expect_error(auk_ebd(f) %>% auk_select(select = cols, file = tmp)) unlink(tmp) }) test_that("auk_select works on sampling events", { # columns cols <- c("latitude", "LONGITUDE", "group_identifier", "sampling event identifier") f <- system.file("extdata/zerofill-ex_sampling.txt", package = "auk") tmp <- tempfile() sampling <- auk_sampling(f) %>% auk_select(select = cols, file = tmp) %>% read_sampling(unique = FALSE) unlink(tmp) expect_is(sampling, "data.frame") expect_equal(ncol(sampling), length(cols)) # raise an error cols <- "wrong column name" tmp <- tempfile() expect_error(auk_sampling(f) %>% auk_select(select = cols, file = tmp)) unlink(tmp) })