downloading reverse dependencies ... downloading aPEAR_1.0.0.tar.gz ... ok downloading arc_1.4.tar.gz ... ok downloading arlclustering_1.0.5.tar.gz ... ok downloading arulesCBA_1.2.7.tar.gz ... ok downloading arulesNBMiner_0.1-8.tar.gz ... ok downloading arulesSequences_0.2-31.tar.gz ... ok downloading arulesViz_1.5.3.tar.gz ... ok downloading clickstream_1.3.3.tar.gz ... ok downloading CLONETv2_2.2.1.tar.gz ... ok downloading CRE_0.2.7.tar.gz ... ok downloading discnorm_0.2.1.tar.gz ... ok downloading fdm2id_0.9.9.tar.gz ... ok downloading GroupBN_1.2.0.tar.gz ... ok downloading ibmdbR_1.51.0.tar.gz ... ok downloading immcp_1.0.3.tar.gz ... ok downloading inTrees_1.4.tar.gz ... ok downloading opusminer_0.1-1.tar.gz ... ok downloading qCBA_1.0.tar.gz ... ok downloading RareComb_1.1.tar.gz ... ok downloading rCBA_0.4.3.tar.gz ... ok downloading recommenderlab_1.0.6.tar.gz ... ok downloading rgnoisefilt_1.1.2.tar.gz ... ok downloading RKEEL_1.3.4.tar.gz ... ok downloading sbrl_1.4.tar.gz ... ok downloading TELP_1.0.2.tar.gz ... ok downloading ctsem_3.10.1.tar.gz ... ok downloading fcaR_1.2.2.tar.gz ... ok downloading nuggets_1.3.0.tar.gz ... ok downloading pmml_2.5.2.tar.gz ... ok downloading rattle_5.5.1.tar.gz ... ok downloading SurvivalTests_1.0.tar.gz ... ok installing dependencies ‘arc’, ‘arules’, ‘arulesCBA’, ‘arulesViz’, ‘bartCause’, ‘bayesbio’, ‘cairoDevice’, ‘cba’, ‘ClickClust’, ‘ClustOfVar’, ‘cOde’, ‘descr’, ‘discretization’, ‘fractional’, ‘ggheatmap’, ‘GoFKernel’, ‘gprofiler2’, ‘hasseDiagram’, ‘ibr’, ‘MCL’, ‘meanShiftR’, ‘mize’, ‘neighbr’, ‘papaja’, ‘PCAmixdata’, ‘pmml’, ‘POSetR’, ‘qCBA’, ‘rattle’, ‘rCBA’, ‘recosystem’, ‘RGtk2’, ‘RKEELdata’, ‘RRF’, ‘sbrl’, ‘SparkR’, ‘Spectrum’, ‘TunePareto’, ‘weibullness’ Warning: packages ‘SparkR’, ‘cairoDevice’, ‘RGtk2’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘tinylabels’, ‘rmdfiltr’ begin installing package ‘tinylabels’ begin installing package ‘rmdfiltr’ begin installing package ‘pmml’ begin installing package ‘bayesbio’ begin installing package ‘MCL’ begin installing package ‘Spectrum’ begin installing package ‘gprofiler2’ begin installing package ‘discretization’ begin installing package ‘ClickClust’ begin installing package ‘RRF’ begin installing package ‘bartCause’ begin installing package ‘GoFKernel’ begin installing package ‘ibr’ begin installing package ‘meanShiftR’ begin installing package ‘PCAmixdata’ begin installing package ‘ggheatmap’ begin installing package ‘TunePareto’ begin installing package ‘recosystem’ begin installing package ‘RKEELdata’ begin installing package ‘cOde’ begin installing package ‘mize’ begin installing package ‘fractional’ begin installing package ‘POSetR’ begin installing package ‘hasseDiagram’ begin installing package ‘neighbr’ begin installing package ‘cba’ begin installing package ‘rattle’ begin installing package ‘descr’ * installing *source* package ‘rmdfiltr’ ... ** package ‘rmdfiltr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdfiltr) begin installing package ‘weibullness’ * installing *source* package ‘GoFKernel’ ... ** package ‘GoFKernel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GoFKernel) begin installing package ‘arules’ * installing *source* package ‘RKEELdata’ ... ** package ‘RKEELdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RKEELdata) * installing *source* package ‘bayesbio’ ... ** package ‘bayesbio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bayesbio) * installing *source* package ‘neighbr’ ... ** package ‘neighbr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (neighbr) * installing *source* package ‘discretization’ ... ** package ‘discretization’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (discretization) * installing *source* package ‘tinylabels’ ... ** package ‘tinylabels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinylabels) begin installing package ‘papaja’ * installing *source* package ‘meanShiftR’ ... ** package ‘meanShiftR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpzlav78/R.INSTALL3fe23038607e12/meanShiftR/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c kdtree.c -o kdtree.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c meanShift.c -o meanShift.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c median.c -o median.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o meanShiftR.so init.o kdtree.o meanShift.o median.o -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpzlav78/R.INSTALL3fe23038607e12/meanShiftR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-meanShiftR/00new/meanShiftR/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (meanShiftR) * installing *source* package ‘cOde’ ... ** package ‘cOde’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cOde) * installing *source* package ‘TunePareto’ ... ** package ‘TunePareto’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjzihxC/R.INSTALL3fe23f1041284/TunePareto/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c TunePareto.c -o TunePareto.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c TunePareto_init.c -o TunePareto_init.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o TunePareto.so TunePareto.o TunePareto_init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjzihxC/R.INSTALL3fe23f1041284/TunePareto/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-TunePareto/00new/TunePareto/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TunePareto) * installing *source* package ‘descr’ ... ** package ‘descr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmphzobtu/R.INSTALL3fe26038e70431/descr/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c descr.c -o descr.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o descr.so descr.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmphzobtu/R.INSTALL3fe26038e70431/descr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-descr/00new/descr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (descr) * installing *source* package ‘hasseDiagram’ ... ** package ‘hasseDiagram’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hasseDiagram) * installing *source* package ‘ClickClust’ ... ** package ‘ClickClust’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpjm3USn/R.INSTALL3fe2384c32bdee/ClickClust/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__HAVE_R_ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libClickClust.c -o libClickClust.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__HAVE_R_ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libEM.c -o libEM.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__HAVE_R_ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libEM_.c -o libEM_.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__HAVE_R_ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libOther.c -o libOther.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -D__HAVE_R_ -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libRandC.c -o libRandC.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o ClickClust.so libClickClust.o libEM.o libEM_.o libOther.o libRandC.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpjm3USn/R.INSTALL3fe2384c32bdee/ClickClust/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ClickClust/00new/ClickClust/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ClickClust) * installing *source* package ‘PCAmixdata’ ... ** package ‘PCAmixdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PCAmixdata) begin installing package ‘ClustOfVar’ * installing *source* package ‘MCL’ ... ** package ‘MCL’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MCL) * installing *source* package ‘mize’ ... ** package ‘mize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mize) * installing *source* package ‘RRF’ ... ** package ‘RRF’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWrOEzl/R.INSTALL3fe20e6f7e5159/RRF/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RRF_init.c -o RRF_init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c classTree.c -o classTree.o classTree.c: In function ‘predictClassTree’: classTree.c:454:47: warning: ‘cbestsplit’ may be used uninitialized [-Wmaybe-uninitialized] 454 | k = cbestsplit[(int) x[m + i * mdim] - 1 + k * maxcat] ? | ^ classTree.c:425:22: note: ‘cbestsplit’ was declared here 425 | int m, i, j, k, *cbestsplit; | ^~~~~~~~~~ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c regTree.c -o regTree.o regTree.c: In function ‘predictRegTree’: regTree.c:335:31: warning: ‘cbestsplit’ may be used uninitialized [-Wmaybe-uninitialized] 335 | k = cbestsplit[(int) x[m + i * mdim] - 1 + k * maxcat] ? | ^ regTree.c:308:22: note: ‘cbestsplit’ was declared here 308 | int i, j, k, m, *cbestsplit; | ^~~~~~~~~~ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c regrf.c -o regrf.o regrf.c: In function ‘regRF’: regrf.c:64:9: warning: variable ‘flagReg’ set but not used [-Wunused-but-set-variable] 64 | int flagReg;//new | ^~~~~~~ regrf.c:54:25: warning: variable ‘averrb’ set but not used [-Wunused-but-set-variable] 54 | double errts = 0.0, averrb, meanY, meanYts, varY, varYts, r, xrand, | ^~~~~~ regrf.c:219:25: warning: ‘ytree’ may be used uninitialized [-Wmaybe-uninitialized] 219 | predictRegTree(xts, ntest, mdim, lDaughter + idx, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 | rDaughter + idx, nodestatus + idx, ytree, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 | upper + idx, avnode + idx, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 | mbest + idx, treeSize[j], cat, *maxcat, nodexts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ regrf.c:57:36: note: ‘ytree’ was declared here 57 | double *yb, *xtmp, *xb, *ytr, *ytree, *tgini; | ^~~~~ regrf.c:219:25: warning: ‘nodexts’ may be used uninitialized [-Wmaybe-uninitialized] 219 | predictRegTree(xts, ntest, mdim, lDaughter + idx, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 | rDaughter + idx, nodestatus + idx, ytree, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 | upper + idx, avnode + idx, | ~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 | mbest + idx, treeSize[j], cat, *maxcat, nodexts); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ regrf.c:63:30: note: ‘nodexts’ was declared here 63 | int *in, *nind, *nodex, *nodexts; | ^~~~~~~ gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rf.c -o rf.o rf.c: In function ‘classRF’: rf.c:110:10: warning: variable ‘tp’ set but not used [-Wunused-but-set-variable] 110 | *tp, *wr; | ^~ rf.c:92:15: warning: variable ‘nimp’ set but not used [-Wunused-but-set-variable] 92 | mimp, nimp, near, nuse, noutall, nrightall, nrightimpall, | ^~~~ rf.c:92:9: warning: variable ‘mimp’ set but not used [-Wunused-but-set-variable] 92 | mimp, nimp, near, nuse, noutall, nrightall, nrightimpall, | ^~~~ rf.c:437:13: warning: ‘oobpair’ may be used uninitialized [-Wmaybe-uninitialized] 437 | computeProximity(prox, oobprox, nodex, jin, oobpair, near); | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rf.c:102:43: note: ‘oobpair’ was declared here 102 | *at, *a, *b, *mind, *nind, *jts, *oobpair; | ^~~~~~~ rf.c:385:25: warning: ‘nclts’ may be used uninitialized [-Wmaybe-uninitialized] 385 | TestSetError(countts, jts, clts, outclts, ntest, nclass, jb+1, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 | errts + jb*(nclass+1), *labelts, nclts, cut); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ rf.c:96:29: note: ‘nclts’ was declared here 96 | *nrightimp, *nout, *nclts, Ntree; | ^~~~~ gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c rfsub.f -o rfsub.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rfutils.c -o rfutils.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o RRF.so RRF_init.o classTree.o regTree.o regrf.o rf.o rfsub.o rfutils.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWrOEzl/R.INSTALL3fe20e6f7e5159/RRF/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RRF/00new/RRF/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RRF) * installing *source* package ‘Spectrum’ ... ** package ‘Spectrum’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Spectrum) * installing *source* package ‘gprofiler2’ ... ** package ‘gprofiler2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gprofiler2) * installing *source* package ‘bartCause’ ... ** package ‘bartCause’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bartCause) * installing *source* package ‘ggheatmap’ ... ** package ‘ggheatmap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggheatmap) * installing *source* package ‘ClustOfVar’ ... ** package ‘ClustOfVar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ClustOfVar) * installing *source* package ‘cba’ ... ** package ‘cba’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpcCEPKO/R.INSTALL3fe25d378a67d8/cba/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c arrayIndex.c -o arrayIndex.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ccfkms.c -o ccfkms.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cluster.c -o cluster.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c coding.c -o coding.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dll.c -o dll.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gknn.c -o gknn.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c greedy.c -o greedy.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c interpolate.c -o interpolate.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c optimal.c -o optimal.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c proximus.c -o proximus.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rock.c -o rock.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sdists.c -o sdists.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c stress.c -o stress.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o cba.so arrayIndex.o ccfkms.o cluster.o coding.o dll.o gknn.o greedy.o interpolate.o optimal.o proximus.o rock.o sdists.o stress.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpcCEPKO/R.INSTALL3fe25d378a67d8/cba/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-cba/00new/cba/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cba) * installing *source* package ‘fractional’ ... ** package ‘fractional’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbDIX9V/R.INSTALL3fe2516d5f30c2/fractional/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fractional.cpp -o fractional.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o fractional.so RcppExports.o fractional.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbDIX9V/R.INSTALL3fe2516d5f30c2/fractional/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fractional/00new/fractional/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fractional) * installing *source* package ‘ibr’ ... ** package ‘ibr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfCylov/R.INSTALL3fe243492d4fbf/ibr/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dssplines.c -o dssplines.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ibr.c -o ibr.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ibr_init.c -o ibr_init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c polynomlocaux.c -o polynomlocaux.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c regression.c -o regression.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o ibr.so dssplines.o ibr.o ibr_init.o polynomlocaux.o regression.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfCylov/R.INSTALL3fe243492d4fbf/ibr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ibr/00new/ibr/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ibr) * installing *source* package ‘papaja’ ... ** package ‘papaja’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (papaja) * installing *source* package ‘pmml’ ... ** package ‘pmml’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pmml) * installing *source* package ‘weibullness’ ... ** package ‘weibullness’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (weibullness) * installing *source* package ‘rattle’ ... ** package ‘rattle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rattle) * installing *source* package ‘arules’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpfFpdsc/R.INSTALL3fe4da66b24192/arules/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c arrayIndex.c -o arrayIndex.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bitmat.c -o bitmat.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dll.c -o dll.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c issubset.c -o issubset.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c istree.c -o istree.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c matrix.c -o matrix.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c newS4object.c -o newS4object.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ptree.c -o ptree.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rapriori.c -o rapriori.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c reclat.c -o reclat.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c similarity.c -o similarity.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c symtab.c -o symtab.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tfscan.c -o tfscan.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tid_count.c -o tid_count.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tract.c -o tract.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c vecops.c -o vecops.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c warm.c -o warm.o In file included from /usr/include/string.h:548, from /home/hornik/tmp/R-d-gcc-14/include/R_ext/RS.h:34, from /home/hornik/tmp/R-d-gcc-14/include/R.h:78, from warm.c:1: In function ‘memset’, inlined from ‘R_hits_ngCMatrix’ at warm.c:71:5: /usr/include/x86_64-linux-gnu/bits/string_fortified.h:59:10: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 59 | return __builtin___memset_chk (__dest, __ch, __len, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 | __glibc_objsize0 (__dest)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o arules.so arrayIndex.o bitmat.o dll.o issubset.o istree.o matrix.o newS4object.o ptree.o rapriori.o reclat.o similarity.o symtab.o tfscan.o tid_count.o tract.o vecops.o warm.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpfFpdsc/R.INSTALL3fe4da66b24192/arules/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-arules/00new/arules/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘abbreviate’ in package ‘arules’ Creating a new generic function for ‘write’ in package ‘arules’ ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (arules) begin installing package ‘arulesCBA’ begin installing package ‘arulesViz’ begin installing package ‘arc’ begin installing package ‘rCBA’ begin installing package ‘sbrl’ * installing *source* package ‘arc’ ... ** package ‘arc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (arc) * installing *source* package ‘arulesCBA’ ... ** package ‘arulesCBA’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9usF3I/R.INSTALL3fe963bc78a1a/arulesCBA/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cba.c -o cba.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dll.c -o dll.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c weighted.c -o weighted.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o arulesCBA.so cba.o dll.o weighted.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9usF3I/R.INSTALL3fe963bc78a1a/arulesCBA/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-arulesCBA/00new/arulesCBA/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (arulesCBA) begin installing package ‘qCBA’ * installing *source* package ‘rCBA’ ... ** package ‘rCBA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rCBA) * installing *source* package ‘arulesViz’ ... ** package ‘arulesViz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (arulesViz) * installing *source* package ‘recosystem’ ... ** package ‘recosystem’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-8) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJCKHU2/R.INSTALL3fe2445c676e72/recosystem/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c mf.cpp -o mf.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c reco-output.cpp -o reco-output.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c reco-predict.cpp -o reco-predict.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c reco-read-data.cpp -o reco-read-data.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c reco-train.cpp -o reco-train.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c reco-tune.cpp -o reco-tune.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppProgress/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register_routines.c -o register_routines.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o recosystem.so mf.o reco-output.o reco-predict.o reco-read-data.o reco-train.o reco-tune.o register_routines.o -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJCKHU2/R.INSTALL3fe2445c676e72/recosystem/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-recosystem/00new/recosystem/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (recosystem) * installing *source* package ‘sbrl’ ... ** package ‘sbrl’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-14 accepts -g... yes checking for gcc-14 option to enable C11 features... none needed checking how to run the C preprocessor... gcc-14 -E checking whether the compiler supports GNU C++... yes checking whether g++-14 -std=gnu++17 accepts -g... yes checking for g++-14 -std=gnu++17 option to enable C++11 features... none needed checking for gsl-config... /usr/bin/gsl-config checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for gmp.h... yes checking for __gmpz_init in -lgmp... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3QOVwp/R.INSTALL3fe9695abaafc8/sbrl/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DGMP -I/usr/local/include -I/usr/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DGMP -g -O2 -Wall -pedantic -mtune=native -I/usr/include -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c rcpp_module.cpp -o rcpp_module.o In file included from rcpp_module.cpp:11: rcpp_module.cpp: In function ‘Rcpp::List _train(int, int, Rcpp::List, Rcpp::CharacterVector, Rcpp::CharacterVector, Rcpp::StringVector, Rcpp::StringVector, Rcpp::IntegerMatrix, Rcpp::IntegerMatrix)’: mytime.h:51:15: warning: variable ‘_tmp’ set but not used [-Wunused-but-set-variable] 51 | float _tmp; \ | ^~~~ rcpp_module.cpp:68:17: note: in expansion of macro ‘REPORT_TIME’ 68 | REPORT_TIME("Initialize time", "per rule", tv_end, data.nrules); | ^~~~~~~~~~~ mytime.h:51:15: warning: variable ‘_tmp’ set but not used [-Wunused-but-set-variable] 51 | float _tmp; \ | ^~~~ rcpp_module.cpp:105:17: note: in expansion of macro ‘REPORT_TIME’ 105 | REPORT_TIME("Time to train", "", tv_end, 1); | ^~~~~~~~~~~ rcpp_module.cpp:108:32: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 108 | for (int i=0; i::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 111 | for (int i=0; i&, size_t, size_t, int)’: rulelib.cpp:122:31: warning: comparison of integer expressions of different signedness: ‘const size_t’ {aka ‘const long unsigned int’} and ‘int’ [-Wsign-compare] 122 | if (nsamples_expected != sample_cnt) | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ rulelib.cpp: In static member function ‘static Ruleset Ruleset::ruleset_init(int, const std::vector&, std::vector&)’: rulelib.cpp:318:27: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 318 | for (int i = 0; i < idarray.size(); i++) { | ~~^~~~~~~~~~~~~~~~ rulelib.cpp: In member function ‘int Ruleset::pick_random_rule(int, gsl_rng*) const’: rulelib.cpp:524:35: warning: comparison of integer expressions of different signedness: ‘const unsigned int’ and ‘int’ [-Wsign-compare] 524 | if (entry.rule_id == new_rule) { | ~~~~~~~~~~~~~~^~~~~~~~~~~ rulelib.cpp: In function ‘int count_ones(v_entry)’: rulelib.cpp:728:23: warning: comparison of integer expressions of different signedness: ‘int’ and ‘long unsigned int’ [-Wsign-compare] 728 | for (i = 0; i < sizeof(v_entry); i++) { | ~~^~~~~~~~~~~~~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DGMP -I/usr/local/include -I/usr/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DGMP -g -O2 -Wall -pedantic -mtune=native -I/usr/include -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c train.cpp -o train.o train.cpp: In function ‘void propose(Ruleset&, std::vector&, std::vector&, int, double&, double&, double, int&, double&, const Params&, gsl_rng*, int (*)(double, double, double, double, double&, gsl_rng*))’: train.cpp:150:45: warning: ‘change_ndx’ may be used uninitialized [-Wmaybe-uninitialized] 150 | new_log_post = compute_log_posterior(rs_new, | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ 151 | rules, nrules, labels, params, 0, change_ndx, prefix_bound); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ train.cpp:116:13: note: ‘change_ndx’ was declared here 116 | int change_ndx, ndx1, ndx2; | ^~~~~~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o sbrl.so rcpp_module.o rulelib.o train.o -Wl,-O1 -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -lgmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3QOVwp/R.INSTALL3fe9695abaafc8/sbrl/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sbrl/00new/sbrl/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sbrl) * installing *source* package ‘qCBA’ ... ** package ‘qCBA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qCBA) * installing *source* package ‘POSetR’ ... ** package ‘POSetR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-8) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9mAJa9/R.INSTALL3fe25b72373460/POSetR/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RMod.cpp -o RMod.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c displayMessage.cpp -o displayMessage.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c displayMessageR.cpp -o displayMessageR.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c evalResult.cpp -o evalResult.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fleAverageHeight.cpp -o fleAverageHeight.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fleMutualRankingProbability.cpp -o fleMutualRankingProbability.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fleMutualRankingProbability2.cpp -o fleMutualRankingProbability2.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c fleSeparation.cpp -o fleSeparation.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c functionLinearExtension.cpp -o functionLinearExtension.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c functionLinearExtensionR.cpp -o functionLinearExtensionR.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c linearEstensionAllLE.cpp -o linearEstensionAllLE.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c linearExtensionBubleyDyer.cpp -o linearExtensionBubleyDyer.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c linearExtensionByTreeOfIdeals.cpp -o linearExtensionByTreeOfIdeals.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c linearExtensionGenerator.cpp -o linearExtensionGenerator.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c linearExtentionLatticeOfIdeals.cpp -o linearExtentionLatticeOfIdeals.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c linearExtentionTreeOfIdeals.cpp -o linearExtentionTreeOfIdeals.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c poset.cpp -o poset.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c random.cpp -o random.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c tranformExtensionIdentity.cpp -o tranformExtensionIdentity.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c tranformExtensionLexicographical.cpp -o tranformExtensionLexicographical.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -DR_NO_REMAP -c utilita.cpp -o utilita.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o POSetR.so RMod.o RcppExports.o displayMessage.o displayMessageR.o evalResult.o fleAverageHeight.o fleMutualRankingProbability.o fleMutualRankingProbability2.o fleSeparation.o functionLinearExtension.o functionLinearExtensionR.o linearEstensionAllLE.o linearExtensionBubleyDyer.o linearExtensionByTreeOfIdeals.o linearExtensionGenerator.o linearExtentionLatticeOfIdeals.o linearExtentionTreeOfIdeals.o poset.o random.o tranformExtensionIdentity.o tranformExtensionLexicographical.o utilita.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9mAJa9/R.INSTALL3fe25b72373460/POSetR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-POSetR/00new/POSetR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (POSetR) checking arules_1.7-9.tar.gz ... checking aPEAR_1.0.0.tar.gz ... checking arc_1.4.tar.gz ... checking arlclustering_1.0.5.tar.gz ... checking arulesCBA_1.2.7.tar.gz ... checking arulesNBMiner_0.1-8.tar.gz ... checking arulesSequences_0.2-31.tar.gz ... checking arulesViz_1.5.3.tar.gz ... checking clickstream_1.3.3.tar.gz ... checking CLONETv2_2.2.1.tar.gz ... checking CRE_0.2.7.tar.gz ... checking discnorm_0.2.1.tar.gz ... checking fdm2id_0.9.9.tar.gz ... checking GroupBN_1.2.0.tar.gz ... checking ibmdbR_1.51.0.tar.gz ... checking immcp_1.0.3.tar.gz ... checking inTrees_1.4.tar.gz ... checking opusminer_0.1-1.tar.gz ... checking qCBA_1.0.tar.gz ... checking RareComb_1.1.tar.gz ... checking rCBA_0.4.3.tar.gz ... checking recommenderlab_1.0.6.tar.gz ... checking rgnoisefilt_1.1.2.tar.gz ... checking RKEEL_1.3.4.tar.gz ... checking sbrl_1.4.tar.gz ... checking TELP_1.0.2.tar.gz ... checking ctsem_3.10.1.tar.gz ... checking fcaR_1.2.2.tar.gz ... checking rattle_5.5.1.tar.gz ... checking SurvivalTests_1.0.tar.gz ... checking pmml_2.5.2.tar.gz ... checking nuggets_1.3.0.tar.gz ... Depends: Package: arules Depends: Matrix (>= 1.4-0), R (>= 4.0.0) Imports: generics, graphics, methods, stats, utils Timings: user system elapsed arules 135.508 10.038 149.002 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 4 27 Check results summary: arules ... OK rdepends_aPEAR ... OK rdepends_arc ... NOTE * checking Rd cross-references ... NOTE rdepends_arlclustering ... OK rdepends_arulesCBA ... OK rdepends_arulesNBMiner ... OK rdepends_arulesSequences ... OK rdepends_arulesViz ... OK rdepends_clickstream ... NOTE * checking Rd cross-references ... NOTE rdepends_CLONETv2 ... OK rdepends_CRE ... OK rdepends_ctsem ... OK rdepends_discnorm ... OK rdepends_fcaR ... OK rdepends_fdm2id ... OK rdepends_GroupBN ... OK rdepends_ibmdbR ... OK rdepends_immcp ... OK rdepends_inTrees ... OK rdepends_nuggets ... OK rdepends_opusminer ... OK rdepends_pmml ... OK rdepends_qCBA ... OK rdepends_RareComb ... OK rdepends_rattle ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_rCBA ... OK rdepends_recommenderlab ... OK rdepends_rgnoisefilt ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_RKEEL ... OK rdepends_sbrl ... OK rdepends_SurvivalTests ... OK rdepends_TELP ... OK