* installing *source* package ‘arrow’ ... ** using staged installation *** pkg-config found. *** Found local C++ source: 'tools/cpp' *** Building libarrow from source For build options and troubleshooting, see the install guide: https://arrow.apache.org/docs/r/articles/install.html **** cmake 3.28.1: /usr/bin/cmake **** arrow **** Error building Arrow C++. **** Printing contents of build log because the build failed while ARROW_R_DEV was set to FALSE ++ pwd + : /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow + : tools/cpp + : /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca + : libarrow/arrow-14.0.2 + : /usr/bin/cmake ++ cd tools/cpp ++ pwd + SOURCE_DIR=/srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/tools/cpp ++ mkdir -p libarrow/arrow-14.0.2 ++ cd libarrow/arrow-14.0.2 ++ pwd + DEST_DIR=/srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/libarrow/arrow-14.0.2 + '[' 2 = '' ']' + '[' '' '!=' '' ']' + '[' '' = false ']' + ARROW_DEFAULT_PARAM=OFF + case "$CXX" in + mkdir -p /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca + pushd /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow + /usr/bin/cmake -DARROW_BOOST_USE_SHARED=OFF -DARROW_BUILD_TESTS=OFF -DARROW_BUILD_SHARED=OFF -DARROW_BUILD_STATIC=ON -DARROW_ACERO=ON -DARROW_COMPUTE=ON -DARROW_CSV=ON -DARROW_DATASET=ON -DARROW_DEPENDENCY_SOURCE=AUTO -DAWSSDK_SOURCE= -DBoost_SOURCE= -Dlz4_SOURCE= -DARROW_FILESYSTEM=ON -DARROW_GCS=OFF -DARROW_JEMALLOC=OFF -DARROW_MIMALLOC=ON -DARROW_JSON=ON -DARROW_PARQUET=ON -DARROW_S3=OFF -DARROW_WITH_BROTLI=OFF -DARROW_WITH_BZ2=OFF -DARROW_WITH_LZ4=ON -DARROW_WITH_RE2=ON -DARROW_WITH_SNAPPY=ON -DARROW_WITH_UTF8PROC=ON -DARROW_WITH_ZLIB=OFF -DARROW_WITH_ZSTD=OFF -DARROW_VERBOSE_THIRDPARTY_BUILD=OFF -DCMAKE_BUILD_TYPE=Release -DCMAKE_FIND_DEBUG_MODE=OFF -DCMAKE_INSTALL_LIBDIR=lib -DCMAKE_INSTALL_PREFIX=/srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/libarrow/arrow-14.0.2 -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_UNITY_BUILD=OFF -Dre2_SOURCE=BUNDLED -Dxsimd_SOURCE= -Dzstd_SOURCE= -G 'Unix Makefiles' /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/tools/cpp -- Building using CMake version: 3.28.1 -- The C compiler identification is Clang 17.0.6 -- The CXX compiler identification is Clang 17.0.6 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/clang-17 - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/clang++-17 - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Arrow version: 14.0.2 (full: '14.0.2') -- Arrow SO version: 1400 (full: 1400.2.0) -- clang-tidy 14 not found -- clang-format 14 not found -- Could NOT find ClangTools (missing: CLANG_FORMAT_BIN CLANG_TIDY_BIN) -- infer not found -- Found Python3: /usr/bin/python3 (found version "3.11.7") found components: Interpreter fatal: not a git repository (or any of the parent directories): .git -- Found cpplint executable at /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/tools/cpp/build-support/cpplint.py -- System processor: x86_64 -- Performing Test CXX_SUPPORTS_SSE4_2 -- Performing Test CXX_SUPPORTS_SSE4_2 - Success -- Performing Test CXX_SUPPORTS_AVX2 -- Performing Test CXX_SUPPORTS_AVX2 - Success -- Performing Test CXX_SUPPORTS_AVX512 -- Performing Test CXX_SUPPORTS_AVX512 - Success -- Arrow build warning level: PRODUCTION -- Using ld linker -- Build Type: RELEASE -- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT -- Performing Test CXX_LINKER_SUPPORTS_VERSION_SCRIPT - Success -- Using AUTO approach to find dependencies -- ARROW_ABSL_BUILD_VERSION: 20211102.0 -- ARROW_ABSL_BUILD_SHA256_CHECKSUM: dcf71b9cba8dc0ca9940c4b316a0c796be8fab42b070bb6b7cab62b48f0e66c4 -- ARROW_AWS_C_AUTH_BUILD_VERSION: v0.6.22 -- ARROW_AWS_C_AUTH_BUILD_SHA256_CHECKSUM: 691a6b4418afcd3dc141351b6ad33fccd8e3ff84df0e9e045b42295d284ee14c -- ARROW_AWS_C_CAL_BUILD_VERSION: v0.5.20 -- ARROW_AWS_C_CAL_BUILD_SHA256_CHECKSUM: acc352359bd06f8597415c366cf4ec4f00d0b0da92d637039a73323dd55b6cd0 -- ARROW_AWS_C_COMMON_BUILD_VERSION: v0.8.9 -- ARROW_AWS_C_COMMON_BUILD_SHA256_CHECKSUM: 2f3fbaf7c38eae5a00e2a816d09b81177f93529ae8ba1b82dc8f31407565327a -- ARROW_AWS_C_COMPRESSION_BUILD_VERSION: v0.2.16 -- ARROW_AWS_C_COMPRESSION_BUILD_SHA256_CHECKSUM: 044b1dbbca431a07bde8255ef9ec443c300fc60d4c9408d4b862f65e496687f4 -- ARROW_AWS_C_EVENT_STREAM_BUILD_VERSION: v0.2.18 -- ARROW_AWS_C_EVENT_STREAM_BUILD_SHA256_CHECKSUM: 310ca617f713bf664e4c7485a3d42c1fb57813abd0107e49790d107def7cde4f -- ARROW_AWS_C_HTTP_BUILD_VERSION: v0.7.3 -- ARROW_AWS_C_HTTP_BUILD_SHA256_CHECKSUM: 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ARROW_GTEST_BUILD_SHA256_CHECKSUM: b4870bf121ff7795ba20d20bcdd8627b8e088f2d1dab299a031c1034eddc93d5 -- ARROW_JEMALLOC_BUILD_VERSION: 5.3.0 -- ARROW_JEMALLOC_BUILD_SHA256_CHECKSUM: 2db82d1e7119df3e71b7640219b6dfe84789bc0537983c3b7ac4f7189aecfeaa -- ARROW_LZ4_BUILD_VERSION: v1.9.4 -- ARROW_LZ4_BUILD_SHA256_CHECKSUM: 0b0e3aa07c8c063ddf40b082bdf7e37a1562bda40a0ff5272957f3e987e0e54b -- ARROW_MIMALLOC_BUILD_VERSION: v2.0.6 -- ARROW_MIMALLOC_BUILD_SHA256_CHECKSUM: 9f05c94cc2b017ed13698834ac2a3567b6339a8bde27640df5a1581d49d05ce5 -- ARROW_NLOHMANN_JSON_BUILD_VERSION: v3.10.5 -- ARROW_NLOHMANN_JSON_BUILD_SHA256_CHECKSUM: 5daca6ca216495edf89d167f808d1d03c4a4d929cef7da5e10f135ae1540c7e4 -- ARROW_OPENTELEMETRY_BUILD_VERSION: v1.8.1 -- ARROW_OPENTELEMETRY_BUILD_SHA256_CHECKSUM: 3d640201594b07f08dade9cd1017bd0b59674daca26223b560b9bb6bf56264c2 -- ARROW_OPENTELEMETRY_PROTO_BUILD_VERSION: v0.17.0 -- ARROW_OPENTELEMETRY_PROTO_BUILD_SHA256_CHECKSUM: f269fbcb30e17b03caa1decd231ce826e59d7651c0f71c3b28eb5140b4bb5412 -- ARROW_ORC_BUILD_VERSION: 1.9.0 -- ARROW_ORC_BUILD_SHA256_CHECKSUM: 0dca8bbccdb2ee87e59ba964933436beebd02ea78c4134424828a8127fbc4faa -- ARROW_PROTOBUF_BUILD_VERSION: v21.3 -- ARROW_PROTOBUF_BUILD_SHA256_CHECKSUM: 2f723218f6cb709ae4cdc4fb5ed56a5951fc5d466f0128ce4c946b8c78c8c49f -- ARROW_RAPIDJSON_BUILD_VERSION: 232389d4f1012dddec4ef84861face2d2ba85709 -- ARROW_RAPIDJSON_BUILD_SHA256_CHECKSUM: b9290a9a6d444c8e049bd589ab804e0ccf2b05dc5984a19ed5ae75d090064806 -- ARROW_RE2_BUILD_VERSION: 2022-06-01 -- ARROW_RE2_BUILD_SHA256_CHECKSUM: f89c61410a072e5cbcf8c27e3a778da7d6fd2f2b5b1445cd4f4508bee946ab0f -- ARROW_SNAPPY_BUILD_VERSION: 1.1.10 -- ARROW_SNAPPY_BUILD_SHA256_CHECKSUM: 49d831bffcc5f3d01482340fe5af59852ca2fe76c3e05df0e67203ebbe0f1d90 -- ARROW_SUBSTRAIT_BUILD_VERSION: v0.27.0 -- ARROW_SUBSTRAIT_BUILD_SHA256_CHECKSUM: 4ed375f69d972a57fdc5ec406c17003a111831d8640d3f1733eccd4b3ff45628 -- ARROW_S2N_TLS_BUILD_VERSION: v1.3.35 -- ARROW_S2N_TLS_BUILD_SHA256_CHECKSUM: 9d32b26e6bfcc058d98248bf8fc231537e347395dd89cf62bb432b55c5da990d -- ARROW_THRIFT_BUILD_VERSION: 0.16.0 -- ARROW_THRIFT_BUILD_SHA256_CHECKSUM: f460b5c1ca30d8918ff95ea3eb6291b3951cf518553566088f3f2be8981f6209 -- ARROW_UCX_BUILD_VERSION: 1.12.1 -- ARROW_UCX_BUILD_SHA256_CHECKSUM: 9bef31aed0e28bf1973d28d74d9ac4f8926c43ca3b7010bd22a084e164e31b71 -- ARROW_UTF8PROC_BUILD_VERSION: v2.7.0 -- ARROW_UTF8PROC_BUILD_SHA256_CHECKSUM: 4bb121e297293c0fd55f08f83afab6d35d48f0af4ecc07523ad8ec99aa2b12a1 -- ARROW_XSIMD_BUILD_VERSION: 9.0.1 -- ARROW_XSIMD_BUILD_SHA256_CHECKSUM: b1bb5f92167fd3a4f25749db0be7e61ed37e0a5d943490f3accdcd2cd2918cc0 -- ARROW_ZLIB_BUILD_VERSION: 1.2.13 -- ARROW_ZLIB_BUILD_SHA256_CHECKSUM: b3a24de97a8fdbc835b9833169501030b8977031bcb54b3b3ac13740f846ab30 -- ARROW_ZSTD_BUILD_VERSION: 1.5.5 -- ARROW_ZSTD_BUILD_SHA256_CHECKSUM: 9c4396cc829cfae319a6e2615202e82aad41372073482fce286fac78646d3ee4 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Looking for _M_ARM64 -- Looking for _M_ARM64 - not found -- Looking for __SIZEOF_INT128__ -- Looking for __SIZEOF_INT128__ - found -- Found Boost: /usr/lib/x86_64-linux-gnu/cmake/Boost-1.83.0/BoostConfig.cmake (found suitable version "1.83.0", minimum required is "1.81") -- Boost include dir: /usr/include CMake Warning at cmake_modules/FindSnappyAlt.cmake:29 (find_package): By not providing "FindSnappy.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "Snappy", but CMake did not find one. Could not find a package configuration file provided by "Snappy" with any of the following names: SnappyConfig.cmake snappy-config.cmake Add the installation prefix of "Snappy" to CMAKE_PREFIX_PATH or set "Snappy_DIR" to a directory containing one of the above files. If "Snappy" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:277 (find_package) cmake_modules/ThirdpartyToolchain.cmake:1364 (resolve_dependency) CMakeLists.txt:542 (include) -- Could NOT find SnappyAlt (missing: Snappy_LIB Snappy_INCLUDE_DIR) -- Building snappy from source -- Building without OpenSSL support. Minimum OpenSSL version 1.0.2 required. CMake Warning at cmake_modules/FindThriftAlt.cmake:56 (find_package): By not providing "FindThrift.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "Thrift", but CMake did not find one. Could not find a package configuration file provided by "Thrift" (requested version 0.11.0) with any of the following names: ThriftConfig.cmake thrift-config.cmake Add the installation prefix of "Thrift" to CMAKE_PREFIX_PATH or set "Thrift_DIR" to a directory containing one of the above files. If "Thrift" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:277 (find_package) cmake_modules/ThirdpartyToolchain.cmake:1697 (resolve_dependency) CMakeLists.txt:542 (include) -- Checking for module 'thrift' -- Package 'thrift', required by 'virtual:world', not found -- Could NOT find ThriftAlt: (Required is at least version "0.11.0") (found ThriftAlt_LIB-NOTFOUND) -- Building Apache Thrift from source -- Building (vendored) mimalloc from source CMake Warning at cmake_modules/FindRapidJSONAlt.cmake:29 (find_package): By not providing "FindRapidJSON.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "RapidJSON", but CMake did not find one. Could not find a package configuration file provided by "RapidJSON" (requested version 1.1.0) with any of the following names: RapidJSONConfig.cmake rapidjson-config.cmake Add the installation prefix of "RapidJSON" to CMAKE_PREFIX_PATH or set "RapidJSON_DIR" to a directory containing one of the above files. If "RapidJSON" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:277 (find_package) cmake_modules/ThirdpartyToolchain.cmake:2327 (resolve_dependency) CMakeLists.txt:542 (include) -- Could NOT find RapidJSONAlt (missing: RAPIDJSON_INCLUDE_DIR) (Required is at least version "1.1.0") -- Building RapidJSON from source CMake Warning at cmake_modules/ThirdpartyToolchain.cmake:277 (find_package): By not providing "Findxsimd.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "xsimd", but CMake did not find one. Could not find a package configuration file provided by "xsimd" with any of the following names: xsimdConfig.cmake xsimd-config.cmake Add the installation prefix of "xsimd" to CMAKE_PREFIX_PATH or set "xsimd_DIR" to a directory containing one of the above files. If "xsimd" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:2379 (resolve_dependency) CMakeLists.txt:542 (include) -- Building xsimd from source CMake Warning at cmake_modules/Findlz4Alt.cmake:29 (find_package): By not providing "Findlz4.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "lz4", but CMake did not find one. Could not find a package configuration file provided by "lz4" with any of the following names: lz4Config.cmake lz4-config.cmake Add the installation prefix of "lz4" to CMAKE_PREFIX_PATH or set "lz4_DIR" to a directory containing one of the above files. If "lz4" provides a separate development package or SDK, be sure it has been installed. Call Stack (most recent call first): cmake_modules/ThirdpartyToolchain.cmake:277 (find_package) cmake_modules/ThirdpartyToolchain.cmake:2470 (resolve_dependency) CMakeLists.txt:542 (include) -- Checking for module 'liblz4' -- Found liblz4, version 1.9.4 -- Found lz4Alt: /usr/lib/x86_64-linux-gnu/liblz4.so -- Providing CMake module for lz4Alt as part of Arrow CMake package -- Using pkg-config package for liblz4 that is used by arrow for static link -- Building RE2 from source -- Could NOT find utf8proc: (Required is at least version "2.2.0") (found utf8proc_LIB-NOTFOUND) -- Building utf8proc from source -- Found hdfs.h at: /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/tools/cpp/thirdparty/hadoop/include/hdfs.h -- All bundled static libraries: Snappy::snappy-static;thrift::thrift;mimalloc::mimalloc;re2::re2;utf8proc::utf8proc -- CMAKE_C_FLAGS: -g -O3 -Wall -pedantic -Qunused-arguments -Wall -Wno-unknown-warning-option -Wno-pass-failed -msse4.2 -- CMAKE_CXX_FLAGS: -g -O3 -Wall -pedantic -Qunused-arguments -fcolor-diagnostics -Wall -Wno-unknown-warning-option -Wno-pass-failed -msse4.2 -- CMAKE_C_FLAGS_RELEASE: -O3 -DNDEBUG -O2 -- CMAKE_CXX_FLAGS_RELEASE: -O3 -DNDEBUG -O2 -- Creating bundled static library target arrow_bundled_dependencies at /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/release/libarrow_bundled_dependencies.a -- Looking for backtrace -- Looking for backtrace - found -- backtrace facility detected in default set of libraries -- Found Backtrace: /usr/include -- --------------------------------------------------------------------- -- Arrow version: 14.0.2 -- -- Build configuration summary: -- Generator: Unix Makefiles -- Build type: RELEASE -- Source directory: /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/tools/cpp -- Install prefix: /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/libarrow/arrow-14.0.2 -- -- Compile and link options: -- -- ARROW_CXXFLAGS="" [default=""] -- Compiler flags to append when compiling Arrow -- ARROW_BUILD_STATIC=ON [default=ON] -- Build static libraries -- ARROW_BUILD_SHARED=OFF [default=ON] -- Build shared libraries -- ARROW_PACKAGE_KIND="" [default=""] -- Arbitrary string that identifies the kind of package -- (for informational purposes) -- ARROW_GIT_ID="" [default=""] -- The Arrow git commit id (if any) -- ARROW_GIT_DESCRIPTION="" [default=""] -- The Arrow git commit description (if any) -- ARROW_NO_DEPRECATED_API=OFF [default=OFF] -- Exclude deprecated APIs from build -- ARROW_POSITION_INDEPENDENT_CODE=ON [default=ON] -- Whether to create position-independent target -- ARROW_USE_CCACHE=ON [default=ON] -- Use ccache when compiling (if available) -- ARROW_USE_SCCACHE=ON [default=ON] -- Use sccache when compiling (if available), -- takes precedence over ccache if a storage backend is configured -- ARROW_USE_LD_GOLD=OFF [default=OFF] -- Use ld.gold for linking on Linux (if available) -- ARROW_USE_PRECOMPILED_HEADERS=OFF [default=OFF] -- Use precompiled headers when compiling -- ARROW_SIMD_LEVEL=SSE4_2 [default=DEFAULT|NONE|SSE4_2|AVX2|AVX512|NEON|SVE|SVE128|SVE256|SVE512] -- Compile-time SIMD optimization level -- ARROW_RUNTIME_SIMD_LEVEL=MAX [default=MAX|NONE|SSE4_2|AVX2|AVX512] -- Max runtime SIMD optimization level -- ARROW_ALTIVEC=ON [default=ON] -- Build with Altivec if compiler has support -- ARROW_RPATH_ORIGIN=OFF [default=OFF] -- Build Arrow libraries with RATH set to $ORIGIN -- ARROW_INSTALL_NAME_RPATH=ON [default=ON] -- Build Arrow libraries with install_name set to @rpath -- ARROW_GGDB_DEBUG=ON [default=ON] -- Pass -ggdb flag to debug builds -- ARROW_WITH_MUSL=OFF [default=OFF] -- Whether the system libc is musl or not -- ARROW_ENABLE_THREADING=ON [default=ON] -- Enable threading in Arrow core -- -- Test and benchmark options: -- -- ARROW_BUILD_EXAMPLES=OFF [default=OFF] -- Build the Arrow examples -- ARROW_BUILD_TESTS=OFF [default=OFF] -- Build the Arrow googletest unit tests -- ARROW_ENABLE_TIMING_TESTS=ON [default=ON] -- Enable timing-sensitive tests -- ARROW_BUILD_INTEGRATION=OFF [default=OFF] -- Build the Arrow integration test executables -- ARROW_BUILD_BENCHMARKS=OFF [default=OFF] -- Build the Arrow micro benchmarks -- ARROW_BUILD_BENCHMARKS_REFERENCE=OFF [default=OFF] -- Build the Arrow micro reference benchmarks -- ARROW_BUILD_OPENMP_BENCHMARKS=OFF [default=OFF] -- Build the Arrow benchmarks that rely on OpenMP -- ARROW_BUILD_DETAILED_BENCHMARKS=OFF [default=OFF] -- Build benchmarks that do a longer exploration of performance -- ARROW_TEST_LINKAGE=static [default=static|shared] -- Linkage of Arrow libraries with unit tests executables. -- ARROW_FUZZING=OFF [default=OFF] -- Build Arrow Fuzzing executables -- ARROW_LARGE_MEMORY_TESTS=OFF [default=OFF] -- Enable unit tests which use large memory -- -- Lint options: -- -- ARROW_ONLY_LINT=OFF [default=OFF] -- Only define the lint and check-format targets -- ARROW_VERBOSE_LINT=OFF [default=OFF] -- If off, 'quiet' flags will be passed to linting tools -- ARROW_GENERATE_COVERAGE=OFF [default=OFF] -- Build with C++ code coverage enabled -- -- Checks options: -- -- ARROW_TEST_MEMCHECK=OFF [default=OFF] -- Run the test suite using valgrind --tool=memcheck -- ARROW_USE_ASAN=OFF [default=OFF] -- Enable Address Sanitizer checks -- ARROW_USE_TSAN=OFF [default=OFF] -- Enable Thread Sanitizer checks -- ARROW_USE_UBSAN=OFF [default=OFF] -- Enable Undefined Behavior sanitizer checks -- -- Project component options: -- -- ARROW_ACERO=ON [default=OFF] -- Build the Arrow Acero Engine Module -- ARROW_AZURE=OFF [default=OFF] -- Build Arrow with Azure support (requires the Azure SDK for C++) -- ARROW_BUILD_UTILITIES=OFF [default=OFF] -- Build Arrow commandline utilities -- ARROW_COMPUTE=ON [default=OFF] -- Build all Arrow Compute kernels -- ARROW_CSV=ON [default=OFF] -- Build the Arrow CSV Parser Module -- ARROW_CUDA=OFF [default=OFF] -- Build the Arrow CUDA extensions (requires CUDA toolkit) -- ARROW_DATASET=ON [default=OFF] -- Build the Arrow Dataset Modules -- ARROW_FILESYSTEM=ON [default=OFF] -- Build the Arrow Filesystem Layer -- ARROW_FLIGHT=OFF [default=OFF] -- Build the Arrow Flight RPC System (requires GRPC, Protocol Buffers) -- ARROW_FLIGHT_SQL=OFF [default=OFF] -- Build the Arrow Flight SQL extension -- ARROW_GANDIVA=OFF [default=OFF] -- Build the Gandiva libraries -- ARROW_GCS=OFF [default=OFF] -- Build Arrow with GCS support (requires the GCloud SDK for C++) -- ARROW_HDFS=OFF [default=OFF] -- Build the Arrow HDFS bridge -- ARROW_IPC=ON [default=ON] -- Build the Arrow IPC extensions -- ARROW_JEMALLOC=OFF [default=ON] -- Build the Arrow jemalloc-based allocator -- ARROW_JSON=ON [default=OFF] -- Build Arrow with JSON support (requires RapidJSON) -- ARROW_MIMALLOC=ON [default=OFF] -- Build the Arrow mimalloc-based allocator -- ARROW_PARQUET=ON [default=OFF] -- Build the Parquet libraries -- ARROW_ORC=OFF [default=OFF] -- Build the Arrow ORC adapter -- ARROW_PYTHON=OFF [default=OFF] -- Build some components needed by PyArrow. -- (This is a deprecated option. Use CMake presets instead.) -- ARROW_S3=OFF [default=OFF] -- Build Arrow with S3 support (requires the AWS SDK for C++) -- ARROW_SKYHOOK=OFF [default=OFF] -- Build the Skyhook libraries -- ARROW_SUBSTRAIT=OFF [default=OFF] -- Build the Arrow Substrait Consumer Module -- ARROW_TENSORFLOW=OFF [default=OFF] -- Build Arrow with TensorFlow support enabled -- ARROW_TESTING=OFF [default=OFF] -- Build the Arrow testing libraries -- -- Thirdparty toolchain options: -- -- ARROW_DEPENDENCY_SOURCE=AUTO [default=AUTO|BUNDLED|SYSTEM|CONDA|VCPKG|BREW] -- Method to use for acquiring arrow's build dependencies -- ARROW_VERBOSE_THIRDPARTY_BUILD=OFF [default=OFF] -- Show output from ExternalProjects rather than just logging to files -- ARROW_DEPENDENCY_USE_SHARED=ON [default=ON] -- Link to shared libraries -- ARROW_BOOST_USE_SHARED=OFF [default=ON] -- Rely on Boost shared libraries where relevant -- ARROW_BROTLI_USE_SHARED=ON [default=ON] -- Rely on Brotli shared libraries where relevant -- ARROW_BZ2_USE_SHARED=ON [default=ON] -- Rely on Bz2 shared libraries where relevant -- ARROW_GFLAGS_USE_SHARED=ON [default=ON] -- Rely on GFlags shared libraries where relevant -- ARROW_GRPC_USE_SHARED=ON [default=ON] -- Rely on gRPC shared libraries where relevant -- ARROW_JEMALLOC_USE_SHARED=ON [default=ON] -- Rely on jemalloc shared libraries where relevant -- ARROW_LLVM_USE_SHARED=ON [default=ON] -- Rely on LLVM shared libraries where relevant -- ARROW_LZ4_USE_SHARED=ON [default=ON] -- Rely on lz4 shared libraries where relevant -- ARROW_OPENSSL_USE_SHARED=ON [default=ON] -- Rely on OpenSSL shared libraries where relevant -- ARROW_PROTOBUF_USE_SHARED=ON [default=ON] -- Rely on Protocol Buffers shared libraries where relevant -- ARROW_SNAPPY_USE_SHARED=ON [default=ON] -- Rely on snappy shared libraries where relevant -- ARROW_THRIFT_USE_SHARED=ON [default=ON] -- Rely on thrift shared libraries where relevant -- ARROW_UTF8PROC_USE_SHARED=ON [default=ON] -- Rely on utf8proc shared libraries where relevant -- ARROW_ZSTD_USE_SHARED=ON [default=ON] -- Rely on zstd shared libraries where relevant -- ARROW_USE_GLOG=OFF [default=OFF] -- Build libraries with glog support for pluggable logging -- ARROW_WITH_BACKTRACE=ON [default=ON] -- Build with backtrace support -- ARROW_WITH_OPENTELEMETRY=OFF [default=OFF] -- Build libraries with OpenTelemetry support for distributed tracing -- ARROW_WITH_BROTLI=OFF [default=OFF] -- Build with Brotli compression -- ARROW_WITH_BZ2=OFF [default=OFF] -- Build with BZ2 compression -- ARROW_WITH_LZ4=ON [default=OFF] -- Build with lz4 compression -- ARROW_WITH_SNAPPY=ON [default=OFF] -- Build with Snappy compression -- ARROW_WITH_ZLIB=OFF [default=OFF] -- Build with zlib compression -- ARROW_WITH_ZSTD=OFF [default=OFF] -- Build with zstd compression -- ARROW_WITH_UCX=OFF [default=OFF] -- Build with UCX transport for Arrow Flight -- (only used if ARROW_FLIGHT is ON) -- ARROW_WITH_UTF8PROC=ON [default=ON] -- Build with support for Unicode properties using the utf8proc library -- (only used if ARROW_COMPUTE is ON or ARROW_GANDIVA is ON) -- ARROW_WITH_RE2=ON [default=ON] -- Build with support for regular expressions using the re2 library -- (only used if ARROW_COMPUTE or ARROW_GANDIVA is ON) -- -- Parquet options: -- -- PARQUET_MINIMAL_DEPENDENCY=OFF [default=OFF] -- Depend only on Thirdparty headers to build libparquet. -- Always OFF if building binaries -- PARQUET_BUILD_EXECUTABLES=OFF [default=OFF] -- Build the Parquet executable CLI tools. Requires static libraries to be built. -- PARQUET_BUILD_EXAMPLES=OFF [default=OFF] -- Build the Parquet examples. Requires static libraries to be built. -- PARQUET_REQUIRE_ENCRYPTION=OFF [default=OFF] -- Build support for encryption. Fail if OpenSSL is not found -- -- Gandiva options: -- -- ARROW_GANDIVA_STATIC_LIBSTDCPP=OFF [default=OFF] -- Include -static-libstdc++ -static-libgcc when linking with -- Gandiva static libraries -- ARROW_GANDIVA_PC_CXX_FLAGS="" [default=""] -- Compiler flags to append when pre-compiling Gandiva operations -- -- Advanced developer options: -- -- ARROW_EXTRA_ERROR_CONTEXT=OFF [default=OFF] -- Compile with extra error context (line numbers, code) -- ARROW_OPTIONAL_INSTALL=OFF [default=OFF] -- If enabled install ONLY targets that have already been built. Please be -- advised that if this is enabled 'install' will fail silently on components -- that have not been built -- ARROW_GDB_INSTALL_DIR="" [default=""] -- Use a custom install directory for GDB plugin. -- In general, you don't need to specify this because the default -- (CMAKE_INSTALL_FULL_BINDIR on Windows, CMAKE_INSTALL_FULL_LIBDIR otherwise) -- is reasonable. -- Outputting build configuration summary to /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/cmake_summary.json -- Configuring done (3.1s) -- Generating done (0.1s) -- Build files have been written to: /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca + /usr/bin/cmake --build . --target install -- -j 2 [ 0%] Creating directories for 'snappy_ep' [ 1%] Creating directories for 'thrift_ep' [ 1%] Performing download step (download, verify and extract) for 'snappy_ep' [ 1%] Performing download step (download, verify and extract) for 'thrift_ep' -- snappy_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-download-*.log [ 1%] No update step for 'snappy_ep' [ 2%] No patch step for 'snappy_ep' [ 3%] Performing configure step for 'snappy_ep' -- thrift_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-download-*.log [ 3%] No update step for 'thrift_ep' [ 3%] No patch step for 'thrift_ep' [ 3%] Performing configure step for 'thrift_ep' -- snappy_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-configure-*.log [ 3%] Performing build step for 'snappy_ep' -- thrift_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-configure-*.log [ 4%] Performing build step for 'thrift_ep' -- snappy_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-build-*.log [ 4%] Performing install step for 'snappy_ep' -- snappy_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/snappy_ep-prefix/src/snappy_ep-stamp/snappy_ep-install-*.log [ 4%] Completed 'snappy_ep' [ 4%] Built target snappy_ep [ 4%] Creating directories for 'mimalloc_ep' [ 5%] Performing download step (download, verify and extract) for 'mimalloc_ep' -- mimalloc_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-download-*.log [ 6%] No update step for 'mimalloc_ep' [ 6%] No patch step for 'mimalloc_ep' [ 6%] Performing configure step for 'mimalloc_ep' -- mimalloc_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-configure-*.log [ 6%] Performing build step for 'mimalloc_ep' -- mimalloc_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-build-*.log [ 6%] Performing install step for 'mimalloc_ep' -- mimalloc_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/mimalloc_ep-prefix/src/mimalloc_ep-stamp/mimalloc_ep-install-*.log [ 7%] Completed 'mimalloc_ep' [ 7%] Built target mimalloc_ep [ 7%] Creating directories for 'rapidjson_ep' [ 8%] Performing download step (download, verify and extract) for 'rapidjson_ep' -- rapidjson_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/rapidjson_ep-stamp/rapidjson_ep-download-*.log [ 9%] No update step for 'rapidjson_ep' [ 9%] No patch step for 'rapidjson_ep' [ 9%] Performing configure step for 'rapidjson_ep' -- rapidjson_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/rapidjson_ep-stamp/rapidjson_ep-configure-*.log [ 9%] Performing build step for 'rapidjson_ep' -- rapidjson_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/rapidjson_ep-stamp/rapidjson_ep-build-*.log [ 9%] Performing install step for 'rapidjson_ep' -- rapidjson_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/rapidjson_ep-stamp/rapidjson_ep-install-*.log [ 9%] Completed 'rapidjson_ep' [ 9%] Built target rapidjson_ep [ 9%] Creating directories for 'xsimd_ep' [ 9%] Performing download step (download, verify and extract) for 'xsimd_ep' -- xsimd_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/xsimd_ep-stamp/xsimd_ep-download-*.log [ 10%] No update step for 'xsimd_ep' [ 10%] No patch step for 'xsimd_ep' [ 10%] Performing configure step for 'xsimd_ep' -- xsimd_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/xsimd_ep-stamp/xsimd_ep-configure-*.log [ 10%] Performing build step for 'xsimd_ep' -- xsimd_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/xsimd_ep-stamp/xsimd_ep-build-*.log [ 11%] Performing install step for 'xsimd_ep' -- xsimd_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/src/xsimd_ep-stamp/xsimd_ep-install-*.log [ 12%] Completed 'xsimd_ep' [ 12%] Built target xsimd_ep [ 12%] Creating directories for 're2_ep' [ 12%] Performing download step (download, verify and extract) for 're2_ep' -- re2_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/re2_ep-prefix/src/re2_ep-stamp/re2_ep-download-*.log [ 12%] No update step for 're2_ep' [ 13%] No patch step for 're2_ep' [ 14%] Performing configure step for 're2_ep' -- re2_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/re2_ep-prefix/src/re2_ep-stamp/re2_ep-configure-*.log [ 14%] Performing build step for 're2_ep' -- thrift_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-build-*.log [ 14%] Performing install step for 'thrift_ep' -- thrift_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/thrift_ep-prefix/src/thrift_ep-stamp/thrift_ep-install-*.log [ 14%] Completed 'thrift_ep' [ 14%] Built target thrift_ep [ 14%] Creating directories for 'utf8proc_ep' [ 14%] Performing download step (download, verify and extract) for 'utf8proc_ep' -- utf8proc_ep download command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-download-*.log [ 14%] No update step for 'utf8proc_ep' [ 14%] No patch step for 'utf8proc_ep' [ 14%] Performing configure step for 'utf8proc_ep' -- utf8proc_ep configure command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-configure-*.log [ 15%] Performing build step for 'utf8proc_ep' -- utf8proc_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-build-*.log [ 16%] Performing install step for 'utf8proc_ep' -- utf8proc_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/utf8proc_ep-prefix/src/utf8proc_ep-stamp/utf8proc_ep-install-*.log [ 16%] Completed 'utf8proc_ep' [ 16%] Built target utf8proc_ep -- re2_ep build command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/re2_ep-prefix/src/re2_ep-stamp/re2_ep-build-*.log [ 16%] Performing install step for 're2_ep' -- re2_ep install command succeeded. See also /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/re2_ep-prefix/src/re2_ep-stamp/re2_ep-install-*.log [ 16%] Completed 're2_ep' [ 16%] Built target re2_ep [ 16%] Bundling /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df67b83b3ca/release/libarrow_bundled_dependencies.a [ 16%] Built target toolchain [ 16%] Built target arrow_bundled_dependencies_merge [ 16%] Built target arrow_dependencies [ 16%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_base.cc.o [ 16%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_binary.cc.o [ 16%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_decimal.cc.o [ 17%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_dict.cc.o [ 17%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_nested.cc.o [ 17%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/array/array_primitive.cc.o [ 18%] Building CXX object 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object src/arrow/CMakeFiles/arrow_objlib.dir/filesystem/mockfs.cc.o [ 69%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/filesystem/path_util.cc.o [ 69%] Building CXX object src/arrow/CMakeFiles/arrow_objlib.dir/filesystem/util_internal.cc.o /srv/hornik/tmp/CRAN/arrow.Rcheck/00_pkg_src/arrow/tools/cpp/src/arrow/filesystem/util_internal.cc:143:7: error: no matching function for call to 'find' 143 | if (std::find(supported_schemes.begin(), supported_schemes.end(), scheme) == |  ^~~~~~~~~ /usr/bin/../lib/gcc/x86_64-linux-gnu/14/../../../../include/c++/14/bits/streambuf_iterator.h:435:5: note: candidate template ignored: could not match 'istreambuf_iterator' against '__normal_iterator' 435 | find(istreambuf_iterator<_CharT> __first, |  ^ 1 error generated. make[2]: *** [src/arrow/CMakeFiles/arrow_objlib.dir/build.make:2848: src/arrow/CMakeFiles/arrow_objlib.dir/filesystem/util_internal.cc.o] Error 1 make[2]: *** Waiting for unfinished jobs.... make[1]: *** [CMakeFiles/Makefile2:1378: src/arrow/CMakeFiles/arrow_objlib.dir/all] Error 2 gmake: *** [Makefile:146: all] Error 2 **** Complete build log may still be present at /tmp/RtmpgNdReM/working_dir/RtmpQ9JbO9/file65df610723d3.log *** Failed to find Arrow C++ libraries. ------------------------- NOTE --------------------------- There was an issue preparing the Arrow C++ libraries. See https://arrow.apache.org/docs/r/articles/install.html ---------------------------------------------------------- Test compile error: :1:10: fatal error: 'arrow/api.h' file not found 1 | #include | ^~~~~~~~~~~~~ 1 error generated. Failing compile command: clang++-17 -E -I/usr/local/include -g -O3 -Wall -pedantic -std=gnu++17 -xc++ - PKG_CFLAGS= PKG_LIBS= ERROR: configuration failed for package ‘arrow’ * removing ‘/srv/hornik/tmp/CRAN/arrow.Rcheck/arrow’