* using log directory ‘/srv/hornik/tmp/CRAN/arrow.Rcheck’
* using R Under development (unstable) (2023-09-19 r85177)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 16.0.6 (15)
    GNU Fortran (Debian 13.2.0-3) 13.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘arrow/DESCRIPTION’ ... OK
* this is package ‘arrow’ version ‘13.0.0.1’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [5s/7s] Note_to_CRAN_maintainers
Maintainer: ‘Nic Crane <thisisnic@gmail.com>’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘arrow’ can be installed ... [25m/14m] OK
* used C++ compiler: ‘Debian clang version 16.0.6 (15)’
* checking C++ specification ... OK
  Not all R platforms support C++17
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking whether startup messages can be suppressed ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [16s/16s] OK
* checking Rd files ... [1s/1s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [8s/7s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [54s/53s] ERROR
  Running ‘testthat.R’ [54s/53s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
  > # Licensed to the Apache Software Foundation (ASF) under one
  > # or more contributor license agreements.  See the NOTICE file
  > # distributed with this work for additional information
  > # regarding copyright ownership.  The ASF licenses this file
  > # to you under the Apache License, Version 2.0 (the
  > # "License"); you may not use this file except in compliance
  > # with the License.  You may obtain a copy of the License at
  > #
  > #   http://www.apache.org/licenses/LICENSE-2.0
  > #
  > # Unless required by applicable law or agreed to in writing,
  > # software distributed under the License is distributed on an
  > # "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
  > # KIND, either express or implied.  See the License for the
  > # specific language governing permissions and limitations
  > # under the License.
  > 
  > library(testthat)
  > library(arrow)
  Some features are not enabled in this build of Arrow. Run `arrow_info()` for more information.
  
  Attaching package: 'arrow'
  
  The following object is masked from 'package:testthat':
  
      matches
  
  The following object is masked from 'package:utils':
  
      timestamp
  
  > library(tibble)
  > 
  > verbose_test_output <- identical(tolower(Sys.getenv("ARROW_R_DEV", "false")), "true") ||
  +   identical(tolower(Sys.getenv("ARROW_R_VERBOSE_TEST", "false")), "true")
  > 
  > if (verbose_test_output) {
  +   arrow_reporter <- MultiReporter$new(list(CheckReporter$new(), LocationReporter$new()))
  + } else {
  +   arrow_reporter <- check_reporter()
  + }
  > test_check("arrow", reporter = arrow_reporter)
  [ FAIL 2 | WARN 8 | SKIP 109 | PASS 6238 ]
  
  ══ Skipped tests (109) ═════════════════════════════════════════════════════════
  • ARROW-14045 (1): 'test-dplyr-distinct.R:118:3'
  • ARROW-17043 (date/datetime arithmetic with integers) (1):
    'test-compute-arith.R:132:3'
  • ARROW-18101 (1): 'test-udf.R:302:3'
  • Arrow C++ not built with gcs (1): 'test-gcs.R:18:1'
  • Arrow C++ not built with gzip (9): 'test-compressed.R:21:3',
    'test-compressed.R:36:3', 'test-compressed.R:52:3', 'test-csv.R:174:3',
    'test-csv.R:608:3', 'test-dataset-csv.R:131:3', 'test-feather.R:209:3',
    'test-parquet.R:68:3', 'test-parquet.R:304:3'
  • Arrow C++ not built with s3 (2): 'test-s3-minio.R:18:1', 'test-s3.R:18:1'
  • Arrow C++ not built with substrait (1): 'test-query-engine.R:96:3'
  • Arrow C++ not built with zstd (5): 'test-backwards-compatibility.R:88:5',
    'test-backwards-compatibility.R:97:5',
    'test-backwards-compatibility.R:107:5', 'test-compressed.R:44:3',
    'test-csv.R:631:3'
  • Flight server is not running (1): 'test-python-flight.R:84:5'
  • GH-33708: timestamp_parsers don't appear to be working properly (1):
    'test-dataset-csv.R:565:3'
  • Ingest_POSIXct only implemented for REALSXP (1): 'test-Array.R:291:3'
  • Need halffloat support: https://issues.apache.org/jira/browse/ARROW-3802 (1):
    'test-Array.R:420:3'
  • On CRAN (75): 'test-Array.R:59:3', 'test-Array.R:209:3',
    'test-Array.R:216:3', 'test-Array.R:1118:3', 'test-Array.R:1183:3',
    'test-Array.R:1221:3', 'test-Array.R:1253:3', 'test-Array.R:1305:3',
    'test-RecordBatch.R:516:3', 'test-RecordBatch.R:525:3', 'test-Table.R:507:3',
    'test-arrow.R:58:3', 'test-backwards-compatibility.R:52:3',
    'test-backwards-compatibility.R:62:3', 'test-backwards-compatibility.R:72:3',
    'test-chunked-array.R:120:3', 'test-compute-no-bindings.R:171:3',
    'test-compute-no-bindings.R:187:3', 'test-dataset-dplyr.R:73:3',
    'test-dataset-dplyr.R:121:3', 'test-dataset-write.R:591:3',
    'test-dataset.R:860:3', 'test-dataset.R:1121:1',
    'test-dplyr-funcs-conditional.R:22:1', 'test-dplyr-funcs-datetime.R:25:1',
    'test-dplyr-funcs-math.R:21:1', 'test-dplyr-funcs-string.R:20:1',
    'test-dplyr-funcs-type.R:23:1', 'test-dplyr-funcs.R:17:1',
    'test-dplyr-glimpse.R:27:3', 'test-dplyr-glimpse.R:33:3',
    'test-dplyr-glimpse.R:39:3', 'test-dplyr-glimpse.R:45:3',
    'test-dplyr-glimpse.R:51:3', 'test-dplyr-glimpse.R:75:3',
    'test-dplyr-glimpse.R:93:3', 'test-dplyr-glimpse.R:101:3',
    'test-dplyr-join.R:125:3', 'test-dplyr-join.R:389:3',
    'test-dplyr-mutate.R:665:3', 'test-dplyr-query.R:625:3',
    'test-dplyr-slice.R:107:3', 'test-dplyr-summarize.R:307:3',
    'test-duckdb.R:19:1', 'test-extension.R:43:3', 'test-extension.R:214:3',
    'test-feather.R:143:3', 'test-feather.R:262:3', 'test-feather.R:332:3',
    'test-filesystem.R:138:3', 'test-filesystem.R:146:3',
    'test-filesystem.R:155:3', 'test-filesystem.R:167:3',
    'test-filesystem.R:178:3', 'test-filesystem.R:193:3', 'test-io.R:71:3',
    'test-ipc-stream.R:44:3', 'test-parquet.R:23:3', 'test-parquet.R:43:3',
    'test-parquet.R:52:3', 'test-parquet.R:59:3', 'test-parquet.R:116:3',
    'test-parquet.R:180:3', 'test-parquet.R:253:3', 'test-parquet.R:479:3',
    'test-python.R:19:3', 'test-python.R:38:1', 'test-safe-call-into-r.R:21:3',
    'test-safe-call-into-r.R:36:3', 'test-safe-call-into-r.R:51:3',
    'test-type.R:61:3', 'test-udf.R:62:3', 'test-udf.R:85:3', 'test-udf.R:215:3',
    'test-util.R:37:3'
  • Parquet test data missing (1): 'test-parquet.R:467:3'
  • TODO (ARROW-16630): make sure BottomK can handle NA ordering (1):
    'test-dplyr-collapse.R:205:3'
  • TODO: (if anyone uses RangeEquals) (1): 'test-Array.R:139:3'
  • TODO: ARROW-14071 (1): 'test-dplyr-filter.R:280:3'
  • Table with 0 cols doesn't know how many rows it should have (1):
    'test-Table.R:114:3'
  • Work around masking of data type functions (ARROW-12322) (1):
    'test-type.R:116:3'
  • environment variable ARROW_LARGE_MEMORY_TESTS (1): 'test-Table.R:673:3'
  • https://issues.apache.org/jira/browse/ARROW-7653 (1): 'test-dataset.R:512:3'
  • tolower(Sys.info()[["sysname"]]) != "windows" is TRUE (1):
    'test-compressed.R:27:3'
  
  ══ Failed tests ════════════════════════════════════════════════════════════════
  ── Error ('test-dplyr-filter.R:291:3'): Filtering on a column that doesn't exist errors correctly ──
  Error: object 'not_a_col' not found
  Backtrace:
       ▆
    1. ├─arrow:::with_language(...) at test-dplyr-filter.R:291:2
    2. │ └─base::force(expr) at tests/testthat/helper-arrow.R:50:2
    3. ├─testthat::expect_warning(...) at test-dplyr-filter.R:296:4
    4. │ └─testthat:::expect_condition_matching(...)
    5. │   └─testthat:::quasi_capture(...)
    6. │     ├─testthat (local) .capture(...)
    7. │     │ └─base::withCallingHandlers(...)
    8. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    9. ├─testthat::expect_error(...)
   10. │ └─testthat:::expect_condition_matching(...)
   11. │   └─testthat:::quasi_capture(...)
   12. │     ├─testthat (local) .capture(...)
   13. │     │ └─base::withCallingHandlers(...)
   14. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
   15. ├─tbl %>% record_batch() %>% filter(not_a_col == 42) %>% ...
   16. ├─dplyr::collect(.)
   17. ├─dplyr::filter(., not_a_col == 42)
   18. └─arrow:::filter.ArrowTabular(., not_a_col == 42)
   19.   └─base::lapply(filts, arrow_eval, arrow_mask(out))
   20.     └─arrow (local) FUN(X[[i]], ...)
   21.       └─base::tryCatch(...)
   22.         └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   23.           └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   24.             └─value[[3L]](cond)
  ── Error ('test-dplyr-mutate.R:520:3'): handle bad expressions ─────────────────
  Error: object 'NOTAVAR' not found
  Backtrace:
       ▆
    1. ├─arrow:::with_language(...) at test-dplyr-mutate.R:520:2
    2. │ └─base::force(expr) at tests/testthat/helper-arrow.R:50:2
    3. ├─testthat::expect_warning(...) at test-dplyr-mutate.R:525:4
    4. │ └─testthat:::expect_condition_matching(...)
    5. │   └─testthat:::quasi_capture(...)
    6. │     ├─testthat (local) .capture(...)
    7. │     │ └─base::withCallingHandlers(...)
    8. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
    9. ├─testthat::expect_error(...)
   10. │ └─testthat:::expect_condition_matching(...)
   11. │   └─testthat:::quasi_capture(...)
   12. │     ├─testthat (local) .capture(...)
   13. │     │ └─base::withCallingHandlers(...)
   14. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
   15. ├─Table$create(tbl) %>% mutate(newvar = NOTAVAR + 2)
   16. ├─dplyr::mutate(., newvar = NOTAVAR + 2)
   17. └─arrow:::mutate.ArrowTabular(., newvar = NOTAVAR + 2)
   18.   └─arrow:::arrow_eval(exprs[[i]], mask)
   19.     └─base::tryCatch(...)
   20.       └─base (local) tryCatchList(expr, classes, parentenv, handlers)
   21.         └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
   22.           └─value[[3L]](cond)
  
  [ FAIL 2 | WARN 8 | SKIP 109 | PASS 6238 ]
  Error: Test failures
  Execution halted
* checking PDF version of manual ... [5s/5s] OK
* checking HTML version of manual ... [3s/3s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 1 ERROR