* using log directory 'd:/RCompile/CRANincoming/R-devel/arlclustering.Rcheck' * using R Under development (unstable) (2024-08-19 r87028 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'arlclustering/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'arlclustering' version '1.0.3' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Mohamed El-MOUSSAOUI ' New submission Possibly misspelled words in DESCRIPTION: preprocess (8:158) The Title field should be in title case. Current version is: 'Package for community detection in social network analysis' In title case that is: 'Package for Community Detection in Social Network Analysis' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'arlclustering' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... NOTE Maintainer field differs from that derived from Authors@R Maintainer: 'Mohamed El-MOUSSAOUI ' Authors@R: 'Mohamed El-Moussaoui ' * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running 'testthat.R' Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(arlclustering) > > test_check("arlclustering") Loading required package: Matrix Attaching package: 'arules' The following objects are masked from 'package:base': abbreviate, write Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 66 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Significant rule set is the same as the redundant rule set... Attaching package: 'igraph' The following object is masked from 'package:arules': union The following object is masked from 'package:testthat': compare The following objects are masked from 'package:stats': decompose, spectrum The following object is masked from 'package:base': union Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 66 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Significant rule set is the same as the redundant rule set...Total Identified Clusters: 12 ========================= Community 01 : 1 2 3 4 8 14 Community 02 : 2 3 4 8 9 14 Community 03 : 3 4 8 14 31 32 34 Community 04 : 5 6 Community 05 : 7 11 Community 06 : 9 14 32 33 Community 07 : 14 20 Community 08 : 24 32 34 Community 09 : 28 33 Community 10 : 29 33 Community 11 : 30 34 Community 12 : 33 34 ========================= Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 66 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 66 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Significant rule set is the same as the redundant rule set...Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 66 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 66 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Significant rule set is the same as the redundant rule set...Apriori Parameter specification: confidence minval smax arem aval originalSupport maxtime support minlen 0.5 0.1 1 none FALSE TRUE 5 0.1 1 maxlen target ext 10 rules TRUE Algorithmic control: filter tree heap memopt load sort verbose 0.1 TRUE TRUE FALSE TRUE 2 TRUE Absolute minimum support count: 2 set item appearances ...[0 item(s)] done [0.00s]. set transactions ...[34 item(s), 28 transaction(s)] done [0.00s]. sorting and recoding items ... [22 item(s)] done [0.00s]. creating transaction tree ... done [0.00s]. checking subsets of size 1 2 3 4 done [0.00s]. writing ... [66 rule(s)] done [0.00s]. creating S4 object ... done [0.00s]. Elapsed time: 1.0252 [ FAIL 1 | WARN 6 | SKIP 1 | PASS 79 ] ══ Skipped tests (1) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-arlc_get_significant_rules.R:40:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-arlc_get_network_dataset.R:54:3'): arlc_get_network_dataset handles unreadable files correctly ── Error in `value[[3L]](cond)`: Error in reading GML file: D:\temp\RtmpgriD5n\filec68c717836a6 At vendor/cigraph/src/io/gml.c:486 : No 'graph' object in GML file. Parse error Backtrace: ▆ 1. ├─testthat::expect_error(...) at test-arlc_get_network_dataset.R:54:3 2. │ └─testthat:::expect_condition_matching(...) 3. │ └─testthat:::quasi_capture(...) 4. │ ├─testthat (local) .capture(...) 5. │ │ └─base::withCallingHandlers(...) 6. │ └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo)) 7. └─arlclustering::arlc_get_network_dataset(temp_file, "Unreadable File") 8. └─base::tryCatch(...) 9. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 10. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 11. └─value[[3L]](cond) [ FAIL 1 | WARN 6 | SKIP 1 | PASS 79 ] Error: Test failures Execution halted * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [35s] OK * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 2 NOTEs