pub <- Publication( citation = RefManageR::BibEntry( key = "test_2000", bibtype = "article", author = "test", title = "test", journal = "test", year = 2000, volume = 0 ), descriptors = list( region = "US-WA" ) ) mod_dup_descriptor <- FixedEffectsModel( response = list(vsia = units::as_units("ft^3")), covariates = list(dsob = units::as_units("in")), predict_fn <- function(dsob) { a * dsob }, descriptors = list(region = "US-WA"), parameters = list(a = 1) ) test_that("Publication add_model errors on duplicated descriptor", { expect_error(add_model(pub, mod_dup_descriptor), "Duplicated descriptors:") }) fixed_effects_model <- FixedEffectsModel( response = list(vsia = units::as_units("ft^3")), covariates = list(dsob = units::as_units("in")), predict_fn = function(dsob) { a * dsob }, parameters = list(a = 1) ) test_that("Publication add_model adds model for fixed effects model", { pub_add_fixef <- add_model(pub, fixed_effects_model) expect_equal(length(pub_add_fixef@response_sets[["vsia"]][[1]]@models), 1) expect_equal(n_models(pub_add_fixef), 1) expect_equal(n_sets(pub_add_fixef), 1) }) fixed_effects_set <- FixedEffectsSet( response = list(vsia = units::as_units("ft^3")), covariates = list(dsob = units::as_units("in")), predict_fn = function(dsob) { a * dsob }, parameter_names = c("a"), model_specifications = tibble::tibble(mod= c(1,2), a = c(1, 2)) ) pub_add_fixef <- add_set(pub, fixed_effects_set) test_that("Publication add_set adds set for fixed effects set", { expect_equal(length(pub_add_fixef@response_sets[["vsia"]][[1]]@models), 2) expect_equal(n_models(pub_add_fixef), 2) expect_equal(n_sets(pub_add_fixef), 1) }) mixed_effects_model <- MixedEffectsModel( response = list(vsia = units::as_units("ft^3")), covariates = list(dsob = units::as_units("in")), predict_fn = function(dsob) { a * dsob + a0i }, predict_ranef = function(dsob) { list(a0i = 0) }, parameters = list(a = 1) ) test_that("Publication add_model adds model for mixed effects model", { pub_add_mixef <- add_model(pub, mixed_effects_model) expect_equal(length(pub_add_mixef@response_sets[["vsia"]][[1]]@models), 1) expect_equal(n_models(pub_add_mixef), 1) expect_equal(n_sets(pub_add_mixef), 1) }) test_that("show method runs for parametric model", { expect_error(invisible(capture.output(show(pub_add_fixef))), NA) })