* using log directory 'd:/RCompile/CRANincoming/R-devel/agcounts.Rcheck'
* using R Under development (unstable) (2024-01-23 r85822 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 12.3.0
    GNU Fortran (GCC) 12.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'agcounts/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'agcounts' version '0.6.6'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Brian C. Helsel <bhelsel80@gmail.com>'

New submission

Non-FOSS package license (CC BY-NC-SA 4.0)

Possibly misspelled words in DESCRIPTION:
  Accelerometer (3:56)
  ActiGraph (12:130)
  Actigraphy (3:33, 11:104)
  Neishabouri (12:31)
  Wearables (12:140)
  accelerometer (11:66)
  al (12:46)
  et (12:43)

Size of tarball: 7872211 bytes
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'agcounts' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 12.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [24s] OK
* checking whether the package can be loaded with stated dependencies ... [23s] OK
* checking whether the package can be unloaded cleanly ... [24s] OK
* checking whether the namespace can be loaded with stated dependencies ... [24s] OK
* checking whether the namespace can be unloaded cleanly ... [26s] OK
* checking loading without being on the library search path ... [24s] OK
* checking whether startup messages can be suppressed ... [23s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [97s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  '.get_sleep'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [25s] OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... [35s] ERROR
  Running 'testthat.R' [35s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
  > library(testthat)
  > library(agcounts)
  > library(reticulate)
  > library(shinytest2)
  > 
  > test_check("agcounts")
  Python module "pygt3x" is not found. Switching parser to GGIR.
  [1] "Reading data with read.gt3x and calibrating with GGIR."
  
  Loading chunk: 1
   There is not enough data to perform the GGIR autocalibration method. Returning data as read by read.gt3x.
  [1] "Reading data with read.gt3x and calibrating with GGIR."
  
  Loading chunk: 1
   There is not enough data to perform the GGIR autocalibration method. Returning data as read by read.gt3x.
  [1] "Reading data with read.gt3x."
  Loading chunk: 1
   There is not enough data to perform the GGIR calibration method. Returning data as read by read.gt3x.
  Loading chunk: 1
* checking PDF version of manual ... [28s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 1 WARNING, 1 NOTE