* using log directory ‘/srv/hornik/tmp/CRAN_pretest/aftsem.Rcheck’
* using R Under development (unstable) (2024-09-02 r87090)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘aftsem/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘aftsem’ version ‘1.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [1s/1s] WARNING
Maintainer: ‘<benedma2@cvut.cz>’

The maintainer field lacks a name

New submission

Non-FOSS package license (GNU General Public License v3.0)

Possibly misspelled words in DESCRIPTION:
  Gehan (10:25)
  Hellers (10:83)
  Jin (10:51)
  lss (10:55)

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Martin",
                      family = "Benedikt",
                      role = "aut"),
               person(role = "cre",
                      email = "benedma2@cvut.cz"))
as necessary.

The Title field should be in title case. Current version is:
  ‘Implemented several basic algorithms for estimation of regression parameters for semiparametric accelerated failure time model’
In title case that is:
  ‘Implemented Several Basic Algorithms for Estimation of Regression Parameters for Semiparametric Accelerated Failure Time Model’

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘aftsem’ can be installed ... [32s/32s] WARNING
Found the following significant warnings:
  Warning: aftsem-package.Rd:26: All text must be in a section
See ‘/srv/hornik/tmp/CRAN_pretest/aftsem.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Debian clang version 18.1.8 (9)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
Non-standard license specification:
  GNU General Public License v3.0
Standardizable: FALSE
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the package can be unloaded cleanly ... [1s/1s] OK
* checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [6s/6s] NOTE
aftsem: no visible binding for global variable ‘response’
Undefined global functions or variables:
  response
* checking Rd files ... [0s/0s] WARNING
prepare_Rd: aftsem-package.Rd:26: All text must be in a section
prepare_Rd: aftsem-package.Rd:32-34: Dropping empty section \examples
* checking Rd metadata ... WARNING
Rd files with duplicated alias 'aftsem':
  ‘aftsem-package.Rd’ ‘aftsem.Rd’
* checking Rd line widths ... OK
* checking Rd cross-references ... NOTE
Unknown package ‘<pkg>’ in Rd xrefs
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... WARNING
Undocumented arguments in Rd file 'gehan_estimation.Rd'
  ‘m’

Functions with \usage entries need to have the appropriate \alias
entries, and all their arguments documented.
The \usage entries must correspond to syntactically valid R code.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking Rd contents ... NOTE
Auto-generated content requiring editing in Rd file 'aftsem-package.Rd':
  \details: ‘...o use the package, including the most important functions ~~’
  \references: ‘~~ Literature or other references for background information ~~’
  \seealso: ‘~~ Optional links to other man pages, e.g. ~~ ~~ \code{\link...’
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... [1s/1s] OK
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 5 WARNINGs, 4 NOTEs