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Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > Sys.setenv(R_TESTS="") > > library(testthat) > library(admixr2) > > test_check("admixr2") Starting 2 test processes. > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-utils.R: No admixr2 workers running. > test-utils.R: No admixr2 workers running. > test-utils.R: No admixr2 workers running. > test-utils.R: admixr2: tv finished on the gradient box constraint (grad_bounds = 5 from the starting value), not at an interior optimum. The reported estimate and SE are those of a constrained fit. Widen grad_bounds, or start closer to the expected value. > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... > test-adfweight.R: > loading into symengine environment... > test-adfweight.R: > pruning branches (`if`/`else`) of full model... > test-adfweight.R: v done > test-adfweight.R: > finding duplicate expressions in admixr2 sensitivity model... [ FAIL 0 | WARN 0 | SKIP 116 | PASS 2264 ] ══ Skipped tests (116) ═════════════════════════════════════════════════════════ • On CRAN (116): 'test-datagen.R:174:3', 'test-datagen.R:196:3', 'test-datagen.R:211:3', 'test-datagen.R:230:3', 'test-datagen.R:247:3', 'test-datagen.R:268:3', 'test-datagen.R:284:3', 'test-datagen.R:299:3', 'test-datagen.R:312:3', 'test-integration-adfo.R:10:3', 'test-integration-adfo.R:17:3', 'test-integration-adfo.R:24:3', 'test-integration-adfo.R:31:3', 'test-integration-adfo.R:37:3', 'test-integration-adfo.R:53:3', 'test-integration-adfo.R:69:3', 'test-integration-adgh-unpaired.R:80:3', 'test-integration-adgh-unpaired.R:90:3', 'test-integration-adgh.R:5:1', 'test-integration-beta.R:50:3', 'test-integration-beta.R:60:3', 'test-integration-beta.R:72:3', 'test-integration-beta.R:83:3', 'test-integration-beta.R:98:3', 'test-integration-beta.R:118:3', 'test-integration-beta.R:130:3', 'test-integration-cache-hit.R:10:1', 'test-integration-cold-session.R:29:3', 'test-integration-cov.R:2:1', 'test-integration-daemon-patch.R:18:1', 'test-integration-daemon-wipe.R:15:1', 'test-integration-datagen-roundtrip.R:30:3', 'test-integration-datagen-roundtrip.R:69:3', 'test-integration-edge-cases.R:9:1', 'test-integration-errmodel.R:72:3', 'test-integration-errmodel.R:94:3', 'test-integration-errmodel.R:100:3', 'test-integration-errmodel.R:110:3', 'test-integration-errmodel.R:139:3', 'test-integration-errmodel.R:146:3', 'test-integration-errmodel.R:172:3', 'test-integration-errmodel.R:196:3', 'test-integration-errmodel.R:208:3', 'test-integration-errmodel.R:238:3', 'test-integration-errmodel.R:263:3', 'test-integration-fixed-theta.R:13:1', 'test-integration-grad-branches.R:13:1', 'test-integration-grad.R:2:1', 'test-integration-gradbatch-multi.R:11:3', 'test-integration-irmc.R:2:1', 'test-integration-model-constant.R:8:1', 'test-integration-multi-output.R:8:1', 'test-integration-nll.R:2:1', 'test-integration-ordinal.R:72:3', 'test-integration-ordinal.R:82:3', 'test-integration-ordinal.R:90:3', 'test-integration-ordinal.R:128:3', 'test-integration-ordinal.R:167:3', 'test-integration-ordinal.R:179:3', 'test-integration-ordinal.R:214:3', 'test-integration-ordinal.R:238:3', 'test-integration-parallel.R:10:3', 'test-integration-parallel.R:37:3', 'test-integration-parallel.R:74:3', 'test-integration-pipeline.R:25:3', 'test-integration-pipeline.R:33:3', 'test-integration-pipeline.R:43:3', 'test-integration-pipeline.R:53:3', 'test-integration-pipeline.R:63:3', 'test-integration-pipeline.R:73:3', 'test-integration-pipeline.R:81:3', 'test-integration-pipeline.R:92:3', 'test-integration-pipeline.R:102:3', 'test-integration-pipeline.R:122:3', 'test-integration-pipeline.R:129:3', 'test-integration-pipeline.R:143:3', 'test-integration-pipeline.R:156:3', 'test-integration-pipeline.R:170:3', 'test-integration-pipeline.R:195:3', 'test-integration-pipeline.R:205:3', 'test-integration-pipeline.R:237:3', 'test-integration-pipeline.R:242:3', 'test-integration-pipeline.R:252:3', 'test-integration-pipeline.R:260:3', 'test-integration-pipeline.R:267:3', 'test-integration-pipeline.R:276:3', 'test-integration-pipeline.R:281:3', 'test-integration-plot.R:3:1', 'test-integration-realdata.R:90:3', 'test-integration-realdata.R:99:3', 'test-integration-realdata.R:110:3', 'test-integration-resid-moments.R:26:1', 'test-integration-roundtrip.R:35:3', 'test-integration-roundtrip.R:84:3', 'test-integration-sandwich.R:2:1', 'test-integration-sens-columns.R:14:1', 'test-integration-sens2.R:8:3', 'test-integration-sens2.R:19:3', 'test-integration-sens2.R:36:3', 'test-integration-sens2.R:56:3', 'test-integration-sens2.R:86:3', 'test-integration-sens2.R:101:3', 'test-integration-sens2.R:125:5', 'test-integration-sens2.R:167:5', 'test-integration-shi21.R:11:1', 'test-integration-simulate.R:2:1', 'test-integration-t-errmodel.R:24:1', 'test-integration-tbs-exact.R:2:1', 'test-integration-theta-sens.R:9:1', 'test-integration-worker-load.R:9:1', 'test-integration-xsession-cache.R:16:1', 'test-restart-output-var.R:24:3', 'test-sens-ui.R:107:3', 'test-sens-ui.R:139:3', 'test-adfweight.R:570:3', 'test-adfweight.R:608:3' [ FAIL 0 | WARN 0 | SKIP 116 | PASS 2264 ] > > proc.time() user system elapsed 19.31 1.65 153.00