downloading reverse dependencies ... downloading adehabitatHR_0.4.21.tar.gz ... ok downloading wildlifeDI_1.0.0.tar.gz ... ok downloading amt_0.2.2.0.tar.gz ... ok downloading m2b_1.0.tar.gz ... ok downloading move_4.2.4.tar.gz ... ok downloading segclust2d_0.3.3.tar.gz ... ok downloading sftrack_0.5.4.tar.gz ... ok downloading SiMRiv_1.0.6.tar.gz ... ok downloading spacetime_1.3-2.tar.gz ... ok downloading track2KBA_1.1.2.tar.gz ... ok downloading trackdf_0.3.3.tar.gz ... ok downloading trajectories_0.2-9.tar.gz ... ok downloading trip_1.10.0.tar.gz ... ok installing dependencies ‘adehabitatHR’, ‘adehabitatLT’, ‘amt’, ‘bcpa’, ‘cshapes’, ‘ctmm’, ‘depmixS4’, ‘EMbC’, ‘move’, ‘move2’, ‘moveHMM’, ‘OpenStreetMap’, ‘solartime’, ‘taxidata’, ‘traipse’ Warning: package ‘taxidata’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘fasttime’, ‘Gmedian’, ‘suntools’ begin installing package ‘Gmedian’ begin installing package ‘fasttime’ begin installing package ‘suntools’ begin installing package ‘moveHMM’ begin installing package ‘move2’ begin installing package ‘bcpa’ begin installing package ‘solartime’ begin installing package ‘depmixS4’ begin installing package ‘cshapes’ begin installing package ‘move’ begin installing package ‘OpenStreetMap’ begin installing package ‘traipse’ begin installing package ‘adehabitatLT’ * installing *source* package ‘fasttime’ ... ** package ‘fasttime’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQslGSO/R.INSTALL27cd4af251298/fasttime/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tparse.c -o tparse.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o fasttime.so tparse.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQslGSO/R.INSTALL27cd4af251298/fasttime/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fasttime/00new/fasttime/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fasttime) * installing *source* package ‘traipse’ ... ** package ‘traipse’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (traipse) * installing *source* package ‘solartime’ ... ** package ‘solartime’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (solartime) * installing *source* package ‘suntools’ ... ** package ‘suntools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading in method for ‘crepuscule’ with signature ‘crds="SpatialPoints",dateTime="POSIXct"’: no definition for class “SpatialPoints” in method for ‘solarnoon’ with signature ‘crds="SpatialPoints",dateTime="POSIXct"’: no definition for class “SpatialPoints” in method for ‘solarpos’ with signature ‘crds="SpatialPoints",dateTime="POSIXct"’: no definition for class “SpatialPoints” in method for ‘sunriset’ with signature ‘crds="SpatialPoints",dateTime="POSIXct"’: no definition for class “SpatialPoints” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (suntools) begin installing package ‘EMbC’ * installing *source* package ‘cshapes’ ... ** package ‘cshapes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cshapes) * installing *source* package ‘depmixS4’ ... ** package ‘depmixS4’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5JRUNN/R.INSTALL27cd5254bc9aaa/depmixS4/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c depmixS4_init.c -o depmixS4_init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fb.c -o fb.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o depmixS4.so depmixS4_init.o fb.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5JRUNN/R.INSTALL27cd5254bc9aaa/depmixS4/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-depmixS4/00new/depmixS4/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for ‘confint’ with signature ‘"mix"’: no definition for class “mix” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (depmixS4) * installing *source* package ‘move2’ ... ** package ‘move2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (move2) * installing *source* package ‘bcpa’ ... ** package ‘bcpa’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdUkRrp/R.INSTALL27cd4c27783552/bcpa/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GetL.cpp -o GetL.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o bcpa.so GetL.o RcppExports.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdUkRrp/R.INSTALL27cd4c27783552/bcpa/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bcpa/00new/bcpa/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bcpa) * installing *source* package ‘adehabitatLT’ ... ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVL99r5/R.INSTALL27cd584688ff2f/adehabitatLT/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tests.c -o tests.o tests.c: In function ‘RasterPas’: tests.c:3312:21: warning: ‘xso’ may be used uninitialized [-Wmaybe-uninitialized] 3312 | REAL(xso)[nso] = xc; | ^~~~~~~~~ tests.c:3265:24: note: ‘xso’ was declared here 3265 | SEXP xl, yl, resu, xso, yso, so, dfso; | ^~~ tests.c:3313:21: warning: ‘yso’ may be used uninitialized [-Wmaybe-uninitialized] 3313 | REAL(yso)[nso] = yc; | ^~~~~~~~~ tests.c:3265:29: note: ‘yso’ was declared here 3265 | SEXP xl, yl, resu, xso, yso, so, dfso; | ^~~ tests.c:3314:21: warning: ‘so’ may be used uninitialized [-Wmaybe-uninitialized] 3314 | REAL(so)[nso] = ((double) (i+1)); | ^~~~~~~~ tests.c:3265:34: note: ‘so’ was declared here 3265 | SEXP xl, yl, resu, xso, yso, so, dfso; | ^~ gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o adehabitatLT.so init.o tests.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVL99r5/R.INSTALL27cd584688ff2f/adehabitatLT/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-adehabitatLT/00new/adehabitatLT/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (adehabitatLT) begin installing package ‘adehabitatHR’ * installing *source* package ‘adehabitatHR’ ... ** package ‘adehabitatHR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVriXkb/R.INSTALL27d01e3b7df4f8/adehabitatHR/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tests.c -o tests.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o adehabitatHR.so init.o tests.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVriXkb/R.INSTALL27d01e3b7df4f8/adehabitatHR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-adehabitatHR/00new/adehabitatHR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (adehabitatHR) * installing *source* package ‘OpenStreetMap’ ... ** package ‘OpenStreetMap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for ‘raster’ with signature ‘"osmtile"’: no definition for class “osmtile” in method for ‘raster’ with signature ‘"OpenStreetMap"’: no definition for class “OpenStreetMap” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OpenStreetMap) * installing *source* package ‘EMbC’ ... ** package ‘EMbC’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpvKeOAE/R.INSTALL27ceff5f408044/EMbC/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mvbc.cpp -o mvbc.o mvbc.cpp: In function ‘Rcpp::NumericVector getClusters_cpp(arma::mat, arma::mat, arma::mat, arma::mat)’: mvbc.cpp:58:48: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare] 58 | for (int k=0; k= 2.10.0), sp, methods, ade4, adehabitatMA, CircStats, stats Imports: graphics, grDevices, utils Timings: user system elapsed adehabitatLT 63.022 5.301 68.694 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 5 8 Check results summary: adehabitatLT ... OK rdepends_adehabitatHR ... NOTE * checking Rd cross-references ... NOTE rdepends_amt ... OK rdepends_m2b ... NOTE * checking Rd files ... [0s/0s] NOTE * checking Rd cross-references ... NOTE rdepends_move ... NOTE * checking Rd files ... [1s/1s] NOTE * checking Rd cross-references ... NOTE rdepends_segclust2d ... OK rdepends_sftrack ... OK rdepends_SiMRiv ... NOTE * checking Rd cross-references ... NOTE * checking compiled code ... NOTE rdepends_spacetime ... OK rdepends_track2KBA ... OK rdepends_trackdf ... OK rdepends_trajectories ... NOTE * checking package dependencies ... NOTE rdepends_trip ... OK rdepends_wildlifeDI ... OK