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Type 'q()' to quit R. > library(ade4) > library(adegraphics) Registered S3 methods overwritten by 'adegraphics': method from biplot.dudi ade4 kplot.foucart ade4 kplot.mcoa ade4 kplot.mfa ade4 kplot.pta ade4 kplot.sepan ade4 kplot.statis ade4 scatter.coa ade4 scatter.dudi ade4 scatter.nipals ade4 scatter.pco ade4 score.acm ade4 score.mix ade4 score.pca ade4 screeplot.dudi ade4 Attaching package: 'adegraphics' The following objects are masked from 'package:ade4': kplotsepan.coa, s.arrow, s.class, s.corcircle, s.distri, s.image, s.label, s.logo, s.match, s.traject, s.value, table.value, triangle.class > library(sp) > pdf("panelSpatial.pdf") > > ## ex1 > data(mafragh, package = "ade4") > dfxy1 <- coordinates(mafragh$Spatial) > g1 <- s.label(dfxy1, Sp = mafragh$Spatial, pSp.col = colorRampPalette(c("yellow", "blue"))(97), pgrid.draw = FALSE, plabels.cex = 0) > > > ## ex2 > data(meuse, package = "sp") > coordinates(meuse) <- ~ x + y > data(meuse.grid, package = "sp") > m <- SpatialPixelsDataFrame(points = meuse.grid[c("x", "y")], data = meuse.grid) > data(meuse.riv) > meuse.sr <- SpatialPolygons(list(Polygons(list(Polygon(meuse.riv)), "meuse.riv"))) > > scale1 <- list("SpatialPolygonsRescale", offset = c(179900, 329600), scale = 500, fill = c("transparent", "black"), layout.scale.bar()) > text11 <- list("sp.text", c(179900, 329700), "0") > text21 <- list("sp.text", c(180400, 329700), "500 m") > arrow1 <- list("SpatialPolygonsRescale", offset = c(178750, 332500), scale = 400, layout.north.arrow()) > river <- list("sp.polygons", meuse.sr, fill = "lightblue") > dfxy2 <- as.data.frame(coordinates(meuse)) > g2 <- s.value(dfxy2, z = meuse[, 1]$cadmium, sp.layout = list(scale1, text11, text21, arrow1, river), Sp = m) > > fac <- meuse@data$ffreq > levels(fac)[1] <- "1 in 2 years" > levels(fac)[2] <- "1 in 10 years" > levels(fac)[3] <- "1 in 50 years" > arrow2 <- list("SpatialPolygonsRescale", layout.north.arrow(), offset = c(181750, 330000), scale = 400) > scale2 <- list("SpatialPolygonsRescale", layout.scale.bar(), offset = c(178050, 333600), scale = 500, fill = c("transparent", "black")) > text12 <- list("sp.text", c(178050, 333700), "0") > text22 <- list("sp.text", c(178550, 333700), "500 m") > g3 <- s.class(dfxy2, fac = fac, sp.layout = list(scale2, text12, text22, arrow2, river), starSize = 1, col = c(1, 2, 4), pellipses.col = c(1, 2, 4), + pellipses.alpha = 0.7, plines.lty = 3, psub.text = "Flooding frequency \n near the Meuse river", psub.pos = c(0.2, 0.88), pgrid.text.cex = 0, + porigin.include = FALSE, Sp = meuse.sr) > > ## ex3 > if(require(Guerry)) { + data(gfrance85) + + dfxy4 <- coordinates(gfrance85) + region.names <- data.frame(gfrance85)[, 5] + col.region <- colors()[c(149, 254, 468, 552, 26)] + g4 <- s.class(dfxy4, region.names, ellip = 0, star = 0, col = col.region, Sp = gfrance85, pSp.col = col.region[region.names], porig.inclu = F) + } Loading required package: Guerry > > ## ex4 > library(sp) > library(lattice) > > data(elec88, package = "ade4") > sp <- elec88$Spatial > > g5 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(SpObject = sp, col = "black", border = "black")}) > g6 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(sp, col = 1:14, border = "black")}) > g7 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], aspect = "iso", panel = function(...) {sp.polygons(sp, col = "black", fill = 1:5)}) > g8 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(SpObject = sp, col = "black", border = "blue")}) > g9 <- xyplot(1 ~ 1, xlim = bbox(sp)[1, ], ylim = bbox(sp)[2, ], panel = function(...) {adeg.panel.Spatial(SpObject = sp, col = "black", border = "blue")}) > #g10 <- s.label(cbind(-80, 35), Sp = nc) > #g11 <- s.label(cbind(-80, 35), Sp = sp) > > > ## ex5 > data(jv73, package = "ade4") > g12 <- s.label(jv73$xy, Sp = jv73$Spatial) > g13 <- s.label(jv73$xy, Sp = jv73$Spatial, pSp.col = "red") > > spoints <- SpatialPoints(jv73$xy) > g14 <- s.label(jv73$xy, Sp = spoints, plab.cex = 0, ppoin.cex = 0, pSp.col = 1) > > sgrid <- SpatialGrid(GridTopology(c(0, 0), c(1, 1), c(3, 5))) > xyplot(0:5 ~ 0:3, panel = function(...) sp.grid(sgrid, col = 1:2)) > > nc <- SpatialGridDataFrame(getGridTopology(sgrid), data = data.frame(matrix(1:15, ncol = 1))) > xyplot(0:5 ~ 0:3, panel = function(...) sp.grid(nc, col = 1, at = pretty(rnorm(15), 2), col.region = 2:3)) > xyplot(0:5 ~ 0:3, panel = function(...) adeg.panel.Spatial(nc, col = 1:3)) > xyplot(0:5 ~ 0:3, panel = function(...) adeg.panel.Spatial(nc, col = 1:2)) > > > ## ex6 > mysp <- SpatialPointsDataFrame(matrix(rnorm(20), 10), data.frame(matrix(rnorm(20), 10))) > s.Spatial(mysp) > s.Spatial(mysp, col = c("red", "blue")) > s.Spatial(mysp, ppoints.cex = 2) > s.Spatial(mysp, ppoints.alpha = 0.5) > s.Spatial(mysp, symbol = "circle") > s.Spatial(mysp, method = "color", ppalette.quanti = colorRampPalette(c("red", "white", "blue"))) > > proc.time() user system elapsed 3.54 0.43 3.98