downloading reverse dependencies ‘actimetrics’, ‘actiplot’, ‘actiread’, ‘actisensorlog’, ‘actisomni’, ‘walking’ trying URL 'file:///data/Repositories/CRAN/src/contrib/actimetrics_0.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/actiplot_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/actiread_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/actisensorlog_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/actisomni_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/walking_0.8.2.tar.gz' installing dependencies ‘actibase’, ‘actigraph.sleepr’, ‘actimetrics’, ‘actiread’, ‘agcounts’, ‘asleep’, ‘GGIR’, ‘GGIRread’, ‘MIMSunit’, ‘read.gt3x’, ‘sleeper’, ‘stepcount’, ‘walking’ also installing the dependencies ‘hexView’, ‘cosinor’, ‘cosinor2’, ‘unisensR’, ‘ActCR’ begin installing package ‘hexView’ begin installing package ‘cosinor’ begin installing package ‘actibase’ begin installing package ‘MIMSunit’ begin installing package ‘actigraph.sleepr’ begin installing package ‘stepcount’ begin installing package ‘GGIRread’ begin installing package ‘read.gt3x’ begin installing package ‘asleep’ begin installing package ‘sleeper’ * installing *source* package ‘hexView’ ... ** this is package ‘hexView’ version ‘0.3-4’ ** package ‘hexView’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hexView) begin installing package ‘unisensR’ * installing *source* package ‘actibase’ ... ** this is package ‘actibase’ version ‘0.8.0’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (actibase) begin installing package ‘walking’ * installing *source* package ‘MIMSunit’ ... ** this is package ‘MIMSunit’ version ‘0.11.3’ ** package ‘MIMSunit’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MIMSunit) * installing *source* package ‘unisensR’ ... ** this is package ‘unisensR’ version ‘0.3.4’ ** package ‘unisensR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (unisensR) * installing *source* package ‘sleeper’ ... ** this is package ‘sleeper’ version ‘0.5.0’ ** package ‘sleeper’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sleeper) * installing *source* package ‘stepcount’ ... ** this is package ‘stepcount’ version ‘0.6.0’ ** package ‘stepcount’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stepcount) * installing *source* package ‘asleep’ ... ** this is package ‘asleep’ version ‘0.3.0’ ** package ‘asleep’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (asleep) * installing *source* package ‘walking’ ... ** this is package ‘walking’ version ‘0.8.2’ ** package ‘walking’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (walking) * installing *source* package ‘cosinor’ ... ** this is package ‘cosinor’ version ‘1.2.3’ ** package ‘cosinor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cosinor) begin installing package ‘cosinor2’ * installing *source* package ‘cosinor2’ ... ** this is package ‘cosinor2’ version ‘0.2.1’ ** package ‘cosinor2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cosinor2) begin installing package ‘ActCR’ * installing *source* package ‘actigraph.sleepr’ ... ** this is package ‘actigraph.sleepr’ version ‘0.4.0’ ** package ‘actigraph.sleepr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplMQW7Y/R.INSTALL23917579253fb6/actigraph.sleepr/src' g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c wle.cpp -o wle.o g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o actigraph.sleepr.so RcppExports.o wle.o -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplMQW7Y/R.INSTALL23917579253fb6/actigraph.sleepr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-actigraph.sleepr/00new/actigraph.sleepr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (actigraph.sleepr) * installing *source* package ‘read.gt3x’ ... ** this is package ‘read.gt3x’ version ‘1.2.0’ ** package ‘read.gt3x’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxYZVMA/R.INSTALL239170481de4c6/read.gt3x/src' g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c activityAsDataFrame.cpp -o activityAsDataFrame.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c parseGT3X.cpp -o parseGT3X.o parseGT3X.cpp: In function ‘Rcpp::NumericMatrix parseGT3X(const char*, int, double, int, uint32_t, uint32_t, uint32_t, bool, bool, bool)’: parseGT3X.cpp:370:7: warning: variable ‘chksum’ set but not used [-Wunused-but-set-variable=] 370 | int chksum; | ^~~~~~ g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o read.gt3x.so RcppExports.o activityAsDataFrame.o parseGT3X.o -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxYZVMA/R.INSTALL239170481de4c6/read.gt3x/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-read.gt3x/00new/read.gt3x/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (read.gt3x) * installing *source* package ‘ActCR’ ... ** this is package ‘ActCR’ version ‘0.4.0’ ** package ‘ActCR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ActCR) * installing *source* package ‘GGIRread’ ... ** this is package ‘GGIRread’ version ‘1.0.11’ ** package ‘GGIRread’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-16 (Debian 16.2.0-3) 16.2.0’ using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpx6LOSN/R.INSTALL23916b6a86eff1/GGIRread/src' g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c AxivityNumUnpack.cpp -o AxivityNumUnpack.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GENEActivReader.cpp -o GENEActivReader.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c find_matrix_packet_start.cpp -o find_matrix_packet_start.o gcc-16 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c resample.cpp -o resample.o g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o GGIRread.so AxivityNumUnpack.o GENEActivReader.o RcppExports.o find_matrix_packet_start.o init.o resample.o -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpx6LOSN/R.INSTALL23916b6a86eff1/GGIRread/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-GGIRread/00new/GGIRread/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GGIRread) begin installing package ‘actiread’ begin installing package ‘GGIR’ * installing *source* package ‘actiread’ ... ** this is package ‘actiread’ version ‘0.5.0’ ** package ‘actiread’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (actiread) begin installing package ‘actimetrics’ * installing *source* package ‘actimetrics’ ... ** this is package ‘actimetrics’ version ‘0.4.0’ ** package ‘actimetrics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (actimetrics) * installing *source* package ‘GGIR’ ... ** this is package ‘GGIR’ version ‘3.3-9’ ** package ‘GGIR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GGIR) begin installing package ‘agcounts’ * installing *source* package ‘agcounts’ ... ** this is package ‘agcounts’ version ‘0.7.0’ ** package ‘agcounts’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-16 (Debian 16.2.0-3) 16.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdehXtX/R.INSTALL2395947063facb/agcounts/src' g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c gcalibrate.cpp -o gcalibrate.o gcalibrate.cpp: In function ‘double calcRes(Rcpp::NumericMatrix, Rcpp::NumericMatrix, Rcpp::DoubleVector)’: gcalibrate.cpp:68:20: warning: comparison of integer expressions of different signedness: ‘int’ and ‘const arma::uword’ {aka ‘const unsigned int’} [-Wsign-compare] 68 | for(int i = 0; i < m.n_cols; i++){ | ~~^~~~~~~~~~ g++-16 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-16/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c resample_helpers.cpp -o resample_helpers.o g++-16 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-16/lib -Wl,-O1 -o agcounts.so RcppExports.o gcalibrate.o resample_helpers.o -L/home/hornik/tmp/R-d-gcc-16/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdehXtX/R.INSTALL2395947063facb/agcounts/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-agcounts/00new/agcounts/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location Downloading uv...Done! Downloading cpython-3.13.16-linux-x86_64-gnu (download) (33.5MiB) Downloaded cpython-3.13.16-linux-x86_64-gnu (download) Downloading numpy (15.9MiB) Downloaded numpy Installed 1 package in 45ms ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (agcounts) checking actibase_0.8.0.tar.gz ... checking actimetrics_0.4.0.tar.gz ... checking actiplot_0.1.0.tar.gz ... checking actiread_0.5.0.tar.gz ... checking actisensorlog_0.2.0.tar.gz ... checking actisomni_0.2.0.tar.gz ... checking walking_0.8.2.tar.gz ... Depends: Package: actibase Depends: R (>= 4.1.0) Imports: magrittr, dplyr, lubridate, hms, tidyr, assertthat, vctrs Timings: user system elapsed actibase 37.455 4.626 43.601 Results: Check status summary: ERROR OK Source packages 0 1 Reverse depends 1 5 Check results summary: actibase ... OK rdepends_actimetrics ... ERROR * checking R code for possible problems ... [5s/5s] NOTE * checking tests ... [111s/171s] ERROR rdepends_actiplot ... OK rdepends_actiread ... OK rdepends_actisensorlog ... OK rdepends_actisomni ... OK rdepends_walking ... OK Check results changes: Package: actimetrics Check: R code for possible problems New result: NOTE Package: actimetrics Check: tests New result: ERROR