* using log directory ‘/srv/hornik/tmp/CRAN/accSDA.Rcheck’ * using R Under development (unstable) (2024-03-03 r86036) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 17.0.6 (5) Debian flang-new version 17.0.6 (5) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘accSDA/DESCRIPTION’ ... OK * this is package ‘accSDA’ version ‘1.1.3’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] Note_to_CRAN_maintainers Maintainer: ‘Gudmundur Einarsson ’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘accSDA’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... NOTE Mismatches for apparent methods not registered: SDADcv: function(x, ...) SDADcv.default: function(X, Y, folds, Om, gam, lams, mu, q, PGsteps, PGtol, maxits, tol, feat, quiet, initTheta, ...) SDAPcv: function(x, ...) SDAPcv.default: function(X, Y, folds, Om, gam, lams, q, PGsteps, PGtol, maxits, tol, feat, quiet, initTheta, bt, L, eta, ...) SDAP: function(x, ...) SDAP.default: function(Xt, Yt, Om, gam, lam, q, PGsteps, PGtol, maxits, tol, initTheta, bt, L, eta, ...) SDAAPcv: function(x, ...) SDAAPcv.default: function(X, Y, folds, Om, gam, lams, q, PGsteps, PGtol, maxits, tol, feat, quiet, initTheta, bt, L, eta, ...) SDAAP: function(x, ...) SDAAP.default: function(Xt, Yt, Om, gam, lam, q, PGsteps, PGtol, maxits, tol, selector, initTheta, bt, L, eta, rankRed, ...) SDAD: function(x, ...) SDAD.default: function(Xt, Yt, Om, gam, lam, mu, q, PGsteps, PGtol, maxits, tol, selector, initTheta, ...) See section ‘Registering S3 methods’ in the ‘Writing R Extensions’ manual. * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s/5s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [4s/4s] OK * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 NOTE