* using log directory 'd:/RCompile/CRANincoming/R-devel/accSDA.Rcheck'
* using R Under development (unstable) (2023-11-13 r85520 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 12.3.0
    GNU Fortran (GCC) 12.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'accSDA/DESCRIPTION' ... OK
* this is package 'accSDA' version '1.1.3'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [10s] NOTE
Maintainer: 'Gudmundur Einarsson <gumeo140688@gmail.com>'

Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'accSDA' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for apparent methods not registered:
SDADcv:
  function(x, ...)
SDADcv.default:
  function(X, Y, folds, Om, gam, lams, mu, q, PGsteps, PGtol, maxits,
           tol, feat, quiet, initTheta)

SDAPcv:
  function(x, ...)
SDAPcv.default:
  function(X, Y, folds, Om, gam, lams, q, PGsteps, PGtol, maxits, tol,
           feat, quiet, initTheta, bt, L, eta)

SDAP:
  function(x, ...)
SDAP.default:
  function(Xt, Yt, Om, gam, lam, q, PGsteps, PGtol, maxits, tol,
           initTheta, bt, L, eta)

SDAAPcv:
  function(x, ...)
SDAAPcv.default:
  function(X, Y, folds, Om, gam, lams, q, PGsteps, PGtol, maxits, tol,
           feat, quiet, initTheta, bt, L, eta)

SDAAP:
  function(x, ...)
SDAAP.default:
  function(Xt, Yt, Om, gam, lam, q, PGsteps, PGtol, maxits, tol,
           selector, initTheta, bt, L, eta, rankRed)

SZVD_kFold_cv:
  function(X, ...)
SZVD_kFold_cv.default:
  function(X, Y, folds, gams, beta, D, q, maxits, tol, ztol, feat,
           penalty, quiet)

SZVD:
  function(train, ...)
SZVD.default:
  function(train, gamma, D, penalty, scaling, tol, maxits, beta, quiet)

ZVD:
  function(A, ...)
ZVD.default:
  function(A, scaling, get_DVs)

SDAD:
  function(x, ...)
SDAD.default:
  function(Xt, Yt, Om, gam, lam, mu, q, PGsteps, PGtol, maxits, tol,
           selector, initTheta)

SZVDcv:
  function(Atrain, ...)
SZVDcv.default:
  function(Atrain, Aval, k, num_gammas, g_mults, D, sparsity_pen,
           scaling, penalty, beta, tol, ztol, maxits, quiet)

Apparent methods for exported generics not registered:
  ASDA.default SZVD.default SZVD_kFold_cv.default SZVDcv.default
  ZVD.default ordASDA.default
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... NOTE
Documented arguments not in \usage in Rd file 'ADMM_EN2.Rd':
  'alpha'

Documented arguments not in \usage in Rd file 'ADMM_EN_SMW.Rd':
  'alpha'

Functions with \usage entries need to have the appropriate \alias
entries, and all their arguments documented.
The \usage entries must correspond to syntactically valid R code.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... OK
* checking PDF version of manual ... [19s] OK
* checking HTML version of manual ... OK
* DONE
Status: 3 NOTEs