* using log directory ‘/srv/hornik/tmp/CRAN_pretest/abms.Rcheck’ * using R Under development (unstable) (2025-02-26 r87827) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (1+b1) Debian flang-new version 19.1.7 (1+b1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘abms/DESCRIPTION’ ... OK * this is package ‘abms’ version ‘0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Francisco Segovia ’ New submission Possibly misspelled words in DESCRIPTION: Augmentend (2:8) The Title field should be in title case. Current version is: ‘Augmentend Bayesian model selection for regression models’ In title case that is: ‘Augmentend Bayesian Model Selection for Regression Models’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘abms’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] NOTE Found if() conditions comparing class() to string: File ‘abms/R/abms.R’: if ((class(y) != "numeric" && class(y) != "integer") || is.vector(y) == FALSE) ... File ‘abms/R/abms.R’: if (class(fit) != "abms") ... File ‘abms/R/abms.R’: if (class(Covariates) != "data.frame" && (is.matrix(Covariates) == FALSE)) ... File ‘abms/R/abms.R’: if (class(Covariates) != "data.frame" && (is.matrix(Covariates) == FALSE)) ... Use inherits() (or maybe is()) instead. * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [212s/212s] NOTE Examples with CPU (user + system) or elapsed time > 5s user system elapsed gibbs_abms 204.890 0.371 205.399 summary_gibbs 5.928 0.052 5.982 * checking PDF version of manual ... [4s/4s] WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: ! Dimension too large. \relax l.241 \Figure{gibbs\_abms\_1.png}{width=600in} ! Dimension too large. \relax l.241 \Figure{gibbs\_abms\_1.png}{width=600in} ! Dimension too large. \Gscale@box ...\tw@ \hss }\else \hb@xt@ #1\wd \z@ {\box \tw@ \kern #1\wd \z@... l.241 \Figure{gibbs\_abms\_1.png}{width=600in} ! Dimension too large. \Gscale@box ...\wd \z@ {\box \tw@ \kern #1\wd \z@ \hss }\fi l.241 \Figure{gibbs\_abms\_1.png}{width=600in} ! Dimension too large. \relax l.243 \Figure{gibbs\_abms\_2.png}{width=600in} ! Dimension too large. \relax l.243 \Figure{gibbs\_abms\_2.png}{width=600in} ! Dimension too large. \Gscale@box ...\tw@ \hss }\else \hb@xt@ #1\wd \z@ {\box \tw@ \kern #1\wd \z@... l.243 \Figure{gibbs\_abms\_2.png}{width=600in} ! Dimension too large. \Gscale@box ...\wd \z@ {\box \tw@ \kern #1\wd \z@ \hss }\fi l.243 \Figure{gibbs\_abms\_2.png}{width=600in} * checking PDF version of manual without index ... ERROR * checking HTML version of manual ... [0s/0s] NOTE Found the following HTML validation problems: gibbs_abms.html:133:4 (gibbs_abms.Rd:105): Warning: attribute "width" has invalid value "600in" gibbs_abms.html:135:4 (gibbs_abms.Rd:107): Warning: attribute "width" has invalid value "600in" * checking for non-standard things in the check directory ... NOTE Found the following files/directories: ‘abms-manual.tex’ * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 WARNING, 5 NOTEs