* using log directory 'd:/RCompile/CRANincoming/R-devel/XYlabmiR.Rcheck' * using R Under development (unstable) (2024-10-21 r87258 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'XYlabmiR/DESCRIPTION' ... OK * this is package 'XYlabmiR' version '0.0.0.9000' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Xuyang Yi <627251009@qq.com>' New submission Version contains large components (0.0.0.9000) Possibly misspelled words in DESCRIPTION: mRNA (2:14) miRNA (2:8, 10:53) The Title field should be in title case. Current version is: 'miRNA-mRNA-protein analysis' In title case that is: 'miRNA-mRNA-Protein Analysis' Size of tarball: 87424018 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'XYlabmiR' can be installed ... OK * checking installed package size ... INFO installed size is 83.4Mb sub-directories of 1Mb or more: extdata 83.4Mb * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [28s] OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [359s] NOTE Examples with CPU (user + system) or elapsed time > 10s user system elapsed calculate_node_importance 59.67 58.17 116.14 calculate_final_weights 62.18 51.13 133.61 visualize_network 48.94 52.08 98.51 * checking PDF version of manual ... [18s] WARNING LaTeX errors when creating PDF version. This typically indicates Rd problems. LaTeX errors found: ! LaTeX Error: Unicode character 用 (U+7528) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! LaTeX Error: Unicode character 于 (U+4E8E) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! LaTeX Error: Unicode character 读 (U+8BFB) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! LaTeX Error: Unicode character 取 (U+53D6) not set up for use with LaTeX. See the LaTeX manual or LaTeX Companion for explanation. Type H for immediate help. ! 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