* installing *source* package ‘XML’ ... ** this is package ‘XML’ version ‘3.99-0.21’ ** using staged installation checking for gcc... clang-21 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-21 -std=gnu23 accepts -g... yes checking for clang-21 -std=gnu23 option to enable C11 features... none needed checking how to run the C preprocessor... clang-21 -std=gnu23 -E checking for sed... /usr/bin/sed checking for pkg-config... /usr/bin/pkg-config checking for xml2-config... /usr/bin/xml2-config USE_XML2 = yes SED_EXTENDED_ARG: -E Minor 15, Patch 1 for 2.15.1 Located parser file -I/usr/include/libxml2/parser.h Checking for 1.8: -I/usr/include/libxml2 Using libxml2.* checking for gzopen in -lz... yes checking for xmlParseFile in -lxml2... yes checking for xmlHashSize in -lxml2... yes Using built-in xmlHashSize Checking DTD parsing (presence of externalSubset)... checking for xmlHashSize in -lxml2... (cached) yes Found xmlHashSize checking for xmlOutputBufferCreateBuffer in -lxml2... yes have xmlOutputBufferCreateBuffer() checking for xmlDocDumpFormatMemoryEnc in -lxml2... yes checking for libxml/xmlversion.h... yes Expat: FALSE Checking for return type of xmlHashScan element routine. No return value for xmlHashScan xmlNs has a context field Checking for cetype_t enumeration Using recent version of R with cetype_t enumeration type for encoding checking for xmlsec1-config... no nodegc default xml-debug default Version has XML_WITH_ZLIB Version has xmlHasFeature() **************************************** Configuration information: Libxml settings libxml include directory: -I/usr/include/libxml2 libxml library directory: -lxml2 -lz -lxml2 libxml 2: -DLIBXML2=1 Compilation flags: -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 Link flags: -lxml2 -lz -lxml2 **************************************** configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/supports.R config.status: creating inst/scripts/RSXML.csh config.status: creating inst/scripts/RSXML.bsh ** libs using C compiler: ‘Debian clang version 21.1.8 (1+b1)’ clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c DocParse.c -o DocParse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c EventParse.c -o EventParse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ExpatParse.c -o ExpatParse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c HTMLParse.c -o HTMLParse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NodeGC.c -o NodeGC.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RSDTD.c -o RSDTD.o RSDTD.c:551:67: warning: 'type' is deprecated [-Wdeprecated-declarations] 551 | INTEGER_DATA(VECTOR_ELT(ans, DTD_CONTENT_TYPE_SLOT))[0] = vals->type; | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:552:41: warning: 'type' is deprecated [-Wdeprecated-declarations] 552 | SET_ENUM_NAME(ContentTypeNames, vals->type, VECTOR_ELT(ans, DTD_CONTENT_TYPE_SLOT)); | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:555:72: warning: 'ocur' is deprecated [-Wdeprecated-declarations] 555 | INTEGER_DATA(VECTOR_ELT(ans, DTD_CONTENT_OCCURANCE_SLOT))[0] = vals->ocur; | ^ /usr/include/libxml2/libxml/tree.h:427:36: note: 'ocur' has been explicitly marked deprecated here 427 | xmlElementContentOccur ocur XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:556:39: warning: 'ocur' is deprecated [-Wdeprecated-declarations] 556 | SET_ENUM_NAME(OccuranceNames, vals->ocur, VECTOR_ELT(ans, DTD_CONTENT_OCCURANCE_SLOT)); | ^ /usr/include/libxml2/libxml/tree.h:427:36: note: 'ocur' has been explicitly marked deprecated here 427 | xmlElementContentOccur ocur XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:559:12: warning: 'type' is deprecated [-Wdeprecated-declarations] 559 | if(vals->type == XML_ELEMENT_CONTENT_SEQ && recursive) { | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:562:19: warning: 'c1' is deprecated [-Wdeprecated-declarations] 562 | num += (vals->c1 != NULL); | ^ /usr/include/libxml2/libxml/tree.h:431:35: note: 'c1' has been explicitly marked deprecated here 431 | struct _xmlElementContent *c1 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:564:21: warning: 'c2' is deprecated [-Wdeprecated-declarations] 564 | num += (vals->c2 != NULL); | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:569:16: warning: 'c1' is deprecated [-Wdeprecated-declarations] 569 | if(vals->c1) { | ^ /usr/include/libxml2/libxml/tree.h:431:35: note: 'c1' has been explicitly marked deprecated here 431 | struct _xmlElementContent *c1 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:570:114: warning: 'c1' is deprecated [-Wdeprecated-declarations] 570 | SET_VECTOR_ELT(VECTOR_ELT(ans, DTD_CONTENT_ELEMENTS_SLOT), num++, RS_XML(createDTDElementContents)(vals->c1, el, 1)); | ^ /usr/include/libxml2/libxml/tree.h:431:35: note: 'c1' has been explicitly marked deprecated here 431 | struct _xmlElementContent *c1 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:574:18: warning: 'c2' is deprecated [-Wdeprecated-declarations] 574 | if(vals->c2) { | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:575:115: warning: 'c2' is deprecated [-Wdeprecated-declarations] 575 | SET_VECTOR_ELT(VECTOR_ELT(ans, DTD_CONTENT_ELEMENTS_SLOT), num++, RS_XML(createDTDElementContents)(vals->c2, el, 1)); | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:579:15: warning: 'name' is deprecated [-Wdeprecated-declarations] 579 | if(vals->name) { | ^ /usr/include/libxml2/libxml/tree.h:429:37: note: 'name' has been explicitly marked deprecated here 429 | const xmlChar *name XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:581:113: warning: 'name' is deprecated [-Wdeprecated-declarations] 581 | SET_STRING_ELT(VECTOR_ELT(ans, DTD_CONTENT_ELEMENTS_SLOT), 0, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(vals->name))); | ^ /usr/include/libxml2/libxml/tree.h:429:37: note: 'name' has been explicitly marked deprecated here 429 | const xmlChar *name XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:585:16: warning: 'type' is deprecated [-Wdeprecated-declarations] 585 | switch(vals->type) { | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:616:36: warning: 'c2' is deprecated [-Wdeprecated-declarations] 616 | xmlElementContentPtr ptr = vals->c2; | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:625:16: warning: 'type' is deprecated [-Wdeprecated-declarations] 625 | ok = (ptr->type == XML_ELEMENT_CONTENT_SEQ); | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:626:16: warning: 'c2' is deprecated [-Wdeprecated-declarations] 626 | ptr = ptr->c2; | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:632:65: warning: 'c1' is deprecated [-Wdeprecated-declarations] 632 | SET_VECTOR_ELT(ans, 0, RS_XML(createDTDElementContents)(vals->c1, el, 1)); | ^ /usr/include/libxml2/libxml/tree.h:431:35: note: 'c1' has been explicitly marked deprecated here 431 | struct _xmlElementContent *c1 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:634:15: warning: 'c2' is deprecated [-Wdeprecated-declarations] 634 | ptr = vals->c2; | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:638:18: warning: 'c1' is deprecated [-Wdeprecated-declarations] 638 | deep = (ptr->c1 != NULL && ptr->type == XML_ELEMENT_CONTENT_SEQ ); | ^ /usr/include/libxml2/libxml/tree.h:431:35: note: 'c1' has been explicitly marked deprecated here 431 | struct _xmlElementContent *c1 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:638:38: warning: 'type' is deprecated [-Wdeprecated-declarations] 638 | deep = (ptr->c1 != NULL && ptr->type == XML_ELEMENT_CONTENT_SEQ ); | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:639:57: warning: 'c1' is deprecated [-Wdeprecated-declarations] 639 | tmp = RS_XML(createDTDElementContents)( deep ? ptr->c1 : ptr, el, deep); | ^ /usr/include/libxml2/libxml/tree.h:431:35: note: 'c1' has been explicitly marked deprecated here 431 | struct _xmlElementContent *c1 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:641:16: warning: 'type' is deprecated [-Wdeprecated-declarations] 641 | ok = (ptr->type == XML_ELEMENT_CONTENT_SEQ); | ^ /usr/include/libxml2/libxml/tree.h:425:36: note: 'type' has been explicitly marked deprecated here 425 | xmlElementContentType type XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:642:16: warning: 'c2' is deprecated [-Wdeprecated-declarations] 642 | ptr = ptr->c2; | ^ /usr/include/libxml2/libxml/tree.h:433:35: note: 'c2' has been explicitly marked deprecated here 433 | struct _xmlElementContent *c2 XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:741:96: warning: 'tree' is deprecated [-Wdeprecated-declarations] 741 | SET_VECTOR_ELT(ans, DTD_ATTRIBUTE_DEFAULT_VALUE_SLOT, RS_XML(AttributeEnumerationList)(val->tree, val, el)); | ^ /usr/include/libxml2/libxml/tree.h:386:34: note: 'tree' has been explicitly marked deprecated here 386 | xmlEnumeration *tree XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:773:16: warning: 'next' is deprecated [-Wdeprecated-declarations] 773 | tmp = tmp->next; | ^ /usr/include/libxml2/libxml/tree.h:343:37: note: 'next' has been explicitly marked deprecated here 343 | struct _xmlEnumeration *next XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:782:71: warning: 'name' is deprecated [-Wdeprecated-declarations] 782 | SET_STRING_ELT(ans, i, COPY_TO_USER_STRING(XMLCHAR_TO_CHAR(tmp->name))); | ^ /usr/include/libxml2/libxml/tree.h:345:36: note: 'name' has been explicitly marked deprecated here 345 | const xmlChar *name XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ RSDTD.c:783:18: warning: 'next' is deprecated [-Wdeprecated-declarations] 783 | tmp = tmp->next; | ^ /usr/include/libxml2/libxml/tree.h:343:37: note: 'next' has been explicitly marked deprecated here 343 | struct _xmlEnumeration *next XML_DEPRECATED_MEMBER; | ^ /usr/include/libxml2/libxml/xmlexports.h:76:50: note: expanded from macro 'XML_DEPRECATED_MEMBER' 76 | #define XML_DEPRECATED_MEMBER __attribute__((deprecated)) | ^ 28 warnings generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RUtils.c -o RUtils.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rcatalog.c -o Rcatalog.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Utils.c -o Utils.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLEventParse.c -o XMLEventParse.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLHashTree.c -o XMLHashTree.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLTree.c -o XMLTree.o XMLTree.c:1415:9: warning: unused variable 'oldIndent' [-Wunused-variable] 1415 | int oldIndent; | ^~~~~~~~~ 1 warning generated. clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fixNS.c -o fixNS.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c libxmlFeatures.c -o libxmlFeatures.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c schema.c -o schema.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xmlsecurity.c -o xmlsecurity.o clang-21 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DNO_CHECKED_ENTITY_FIELD=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DNO_XML_MEMORY_SHOW_ROUTINE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xpath.c -o xpath.o xpath.c:255:15: warning: assigning to 'xmlXPathFunction' (aka 'void (*)(struct _xmlXPathParserContext *, int)') from 'void *' converts between void pointer and function pointer [-Wpedantic] 255 | routine = R_ExternalPtrAddr(el); | ^ ~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-21 -std=gnu23 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o XML.so DocParse.o EventParse.o ExpatParse.o HTMLParse.o NodeGC.o RSDTD.o RUtils.o Rcatalog.o Utils.o XMLEventParse.o XMLHashTree.o XMLTree.o fixNS.o libxmlFeatures.o schema.o xmlsecurity.o xpath.o -lxml2 -lz -lxml2 -L/home/hornik/tmp/R-d-clang-21/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/XML.Rcheck/00LOCK-XML/00new/XML/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘source’ from package ‘base’ in package ‘XML’ in method for ‘xmlAttrsToDataFrame’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘readKeyValueDB’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘readSolrDoc’ with signature ‘"AsIs"’: no definition for class “AsIs” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XML)