downloading reverse dependencies ‘adepro’, ‘AdhereRViz’, ‘ajv’, ‘almanac’, ‘asciicast’, ‘audubon’, ‘badgen’, ‘colormap’, ‘concaveman’, ‘covatest’, ‘cppcheckR’, ‘ctrdata’, ‘daff’, ‘dagitty’, ‘DiagrammeRsvg’, ‘DOT’, ‘dtrackr’, ‘emuR’, ‘geojsonio’, ‘gfer’, ‘h3jsr’, ‘ical’, ‘js’, ‘JSconsole’, ‘jsonld’, ‘jsonNormalize’, ‘jsonvalidate’, ‘juicyjuice’, ‘katex’, ‘nodbi’, ‘openrouteservice’, ‘prismjs’, ‘randomcoloR’, ‘rjade’, ‘rless’, ‘rmapshaper’, ‘S7schema’, ‘sketch’, ‘toml’, ‘trackeRapp’, ‘tweetcheck’, ‘uaparserjs’, ‘usincometaxes’, ‘altair’, ‘animate’, ‘ASRgenomics’, ‘bracer’, ‘causalOT’, ‘EstimationTools’, ‘glmm’, ‘hydroState’, ‘leaflet.providers’, ‘matRiks’, ‘metabodecon’, ‘mousetRajectory’, ‘nomnoml’, ‘nscancor’, ‘phyloregion’, ‘pmwg’, ‘RDML’, ‘reactable’, ‘reactR’, ‘RelDists’, ‘rgl’, ‘rgl2gltf’, ‘rstan’, ‘rstanarm’, ‘rsvddpd’, ‘shinyChakraUI’, ‘shortIRT’, ‘sim2Dpredictr’, ‘SpatMCA’, ‘SpatPCA’, ‘TDCM’, ‘TempStable’, ‘vegawidget’, ‘warbleR’ trying URL 'file:///data/Repositories/CRAN/src/contrib/adepro_4.2.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/AdhereRViz_0.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ajv_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/almanac_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/asciicast_2.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/audubon_0.6.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/badgen_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/colormap_0.1.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/concaveman_1.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/covatest_1.2.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/cppcheckR_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ctrdata_1.26.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/daff_1.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dagitty_0.3-4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/DiagrammeRsvg_0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/DOT_0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dtrackr_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/emuR_2.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/geojsonio_0.11.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/gfer_0.1.12.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/h3jsr_1.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ical_0.1.6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/js_1.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/JSconsole_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jsonld_2.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jsonNormalize_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jsonvalidate_1.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/juicyjuice_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/katex_1.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nodbi_0.14.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/openrouteservice_0.6.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/prismjs_2.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/randomcoloR_1.1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rjade_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rless_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rmapshaper_0.6.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/S7schema_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/sketch_1.1.20.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/toml_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/trackeRapp_1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tweetcheck_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/uaparserjs_0.3.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/usincometaxes_0.7.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/altair_4.2.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/animate_0.3.9.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ASRgenomics_1.1.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bracer_1.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/causalOT_1.0.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/EstimationTools_4.3.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/glmm_1.4.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/hydroState_0.2.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/leaflet.providers_3.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/matRiks_0.1.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/metabodecon_1.6.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mousetRajectory_0.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nomnoml_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nscancor_0.7.0-6.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/phyloregion_1.0.9.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/pmwg_0.2.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RDML_1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/reactable_0.4.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/reactR_0.6.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RelDists_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rgl_1.3.36.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rgl2gltf_1.0.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rstan_2.32.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rstanarm_2.32.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/rsvddpd_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shinyChakraUI_1.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/shortIRT_1.0.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/sim2Dpredictr_0.1.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SpatMCA_1.0.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SpatPCA_1.3.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TDCM_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/TempStable_0.2.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vegawidget_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/warbleR_1.1.37.tar.gz' installing dependencies ‘AdequacyModel’, ‘AdhereR’, ‘AGHmatrix’, ‘alr4’, ‘autoimage’, ‘bioacoustics’, ‘CBPS’, ‘CCA’, ‘CCP’, ‘chipPCR’, ‘compare’, ‘condMVNorm’, ‘elastic’, ‘EstimationTools’, ‘gamlss.cens’, ‘gaussquad’, ‘gistr’, ‘gsheet’, ‘js’, ‘kfigr’, ‘manipulateWidget’, ‘mapdeck’, ‘maptpx’, ‘MassSpecWavelet’, ‘matlabr’, ‘MBmca’, ‘mdrb’, ‘monitoR’, ‘NatureSounds’, ‘nodbi’, ‘orientlib’, ‘pipeR’, ‘predicts’, ‘pryr’, ‘qpcR’, ‘readJDX’, ‘rkeops’, ‘rtdists’, ‘scico’, ‘Sim.DiffProc’, ‘sofa’, ‘soundgen’, ‘sparkline’, ‘speaq’, ‘spTimer’, ‘StableEstim’, ‘superheat’, ‘tippy’, ‘toscutil’, ‘trackeR’, ‘V8’, ‘vegawidget’, ‘wrassp’, ‘xdvir’ Warning: packages ‘pryr’, ‘rkeops’, ‘mdrb’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘webp’, ‘colourvalues’, ‘interleave’, ‘spatialwidget’, ‘ptw’, ‘hexView’, ‘phonTools’ begin installing package ‘webp’ begin installing package ‘colourvalues’ begin installing package ‘interleave’ begin installing package ‘ptw’ begin installing package ‘hexView’ begin installing package ‘phonTools’ begin installing package ‘CCP’ begin installing package ‘wrassp’ begin installing package ‘compare’ begin installing package ‘matlabr’ begin installing package ‘gistr’ begin installing package ‘gsheet’ begin installing package ‘sofa’ begin installing package ‘elastic’ begin installing package ‘trackeR’ begin installing package ‘vegawidget’ begin installing package ‘AGHmatrix’ begin installing package ‘superheat’ begin installing package ‘CBPS’ begin installing package ‘autoimage’ begin installing package ‘gaussquad’ begin installing package ‘AdequacyModel’ begin installing package ‘readJDX’ begin installing package ‘toscutil’ begin installing package ‘MassSpecWavelet’ begin installing package ‘CCA’ begin installing package ‘maptpx’ begin installing package ‘predicts’ * installing *source* package ‘gsheet’ ... ** this is package ‘gsheet’ version ‘0.4.6’ ** package ‘gsheet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gsheet) begin installing package ‘condMVNorm’ * installing *source* package ‘CCP’ ... ** this is package ‘CCP’ version ‘1.2’ ** package ‘CCP’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CCP) begin installing package ‘rtdists’ * installing *source* package ‘hexView’ ... ** this is package ‘hexView’ version ‘0.3-4’ ** package ‘hexView’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hexView) begin installing package ‘pipeR’ * installing *source* package ‘webp’ ... ** this is package ‘webp’ version ‘1.3.0’ ** package ‘webp’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/webp Using PKG_LIBS=-lwebp ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCLfm6p/R.INSTALL383ceb5bcdbf7b/webp/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c webp.c -o webp.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o webp.so register.o webp.o -lwebp -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCLfm6p/R.INSTALL383ceb5bcdbf7b/webp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-webp/00new/webp/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (webp) begin installing package ‘qpcR’ * installing *source* package ‘AdequacyModel’ ... ** this is package ‘AdequacyModel’ version ‘2.0.0’ ** package ‘AdequacyModel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AdequacyModel) begin installing package ‘kfigr’ * installing *source* package ‘matlabr’ ... ** this is package ‘matlabr’ version ‘1.5.2’ ** package ‘matlabr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (matlabr) begin installing package ‘sparkline’ * installing *source* package ‘gaussquad’ ... ** this is package ‘gaussquad’ version ‘1.0-3’ ** package ‘gaussquad’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gaussquad) begin installing package ‘tippy’ * installing *source* package ‘toscutil’ ... ** this is package ‘toscutil’ version ‘2.8.0’ ** package ‘toscutil’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (toscutil) begin installing package ‘gamlss.cens’ * installing *source* package ‘compare’ ... ** this is package ‘compare’ version ‘0.2-6’ ** package ‘compare’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compare) * installing *source* package ‘condMVNorm’ ... ** this is package ‘condMVNorm’ version ‘2025.1’ ** package ‘condMVNorm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (condMVNorm) begin installing package ‘alr4’ begin installing package ‘orientlib’ * installing *source* package ‘MassSpecWavelet’ ... ** this is package ‘MassSpecWavelet’ version ‘1.77.0’ ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2s6LbY/R.INSTALL383d515c4fd4ad/MassSpecWavelet/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c find_local_maximum.c -o find_local_maximum.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o MassSpecWavelet.so find_local_maximum.o init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2s6LbY/R.INSTALL383d515c4fd4ad/MassSpecWavelet/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-MassSpecWavelet/00new/MassSpecWavelet/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MassSpecWavelet) begin installing package ‘manipulateWidget’ * installing *source* package ‘ptw’ ... ** this is package ‘ptw’ version ‘1.9-17’ ** package ‘ptw’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBf6KA6/R.INSTALL383cfe7f971b7d/ptw/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c approx.c -o approx.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c smth.c -o smth.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wcc.c -o wcc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wccStick.c -o wccStick.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o ptw.so approx.o register.o smth.o wcc.o wccStick.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBf6KA6/R.INSTALL383cfe7f971b7d/ptw/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ptw/00new/ptw/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ptw) begin installing package ‘spTimer’ * installing *source* package ‘readJDX’ ... ** this is package ‘readJDX’ version ‘0.6.4’ ** package ‘readJDX’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (readJDX) begin installing package ‘scico’ * installing *source* package ‘vegawidget’ ... ** this is package ‘vegawidget’ version ‘0.5.0’ ** package ‘vegawidget’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vegawidget) begin installing package ‘StableEstim’ * installing *source* package ‘pipeR’ ... ** this is package ‘pipeR’ version ‘0.6.1.3’ ** package ‘pipeR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pipeR) begin installing package ‘NatureSounds’ * installing *source* package ‘superheat’ ... ** this is package ‘superheat’ version ‘0.1.0’ ** package ‘superheat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (superheat) begin installing package ‘monitoR’ * installing *source* package ‘maptpx’ ... ** this is package ‘maptpx’ version ‘1.9-7’ ** package ‘maptpx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3QyaKM/R.INSTALL383d533dd154fc/maptpx/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c latools.c -o latools.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rhelp.c -o rhelp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c topics.c -o topics.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o maptpx.so init.o latools.o rhelp.o topics.o -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3QyaKM/R.INSTALL383d533dd154fc/maptpx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-maptpx/00new/maptpx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maptpx) begin installing package ‘bioacoustics’ * installing *source* package ‘sofa’ ... ** this is package ‘sofa’ version ‘0.4.0’ ** package ‘sofa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sofa) begin installing package ‘Sim.DiffProc’ * installing *source* package ‘autoimage’ ... ** this is package ‘autoimage’ version ‘2.2.3’ ** package ‘autoimage’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (autoimage) begin installing package ‘V8’ * installing *source* package ‘kfigr’ ... ** this is package ‘kfigr’ version ‘1.2.1’ ** package ‘kfigr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kfigr) begin installing package ‘AdhereR’ * installing *source* package ‘sparkline’ ... ** this is package ‘sparkline’ version ‘2.0’ ** package ‘sparkline’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sparkline) begin installing package ‘speaq’ * installing *source* package ‘tippy’ ... ** this is package ‘tippy’ version ‘0.1.0’ ** package ‘tippy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tippy) begin installing package ‘chipPCR’ * installing *source* package ‘gistr’ ... ** this is package ‘gistr’ version ‘0.9.0’ ** package ‘gistr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gistr) begin installing package ‘EstimationTools’ * installing *source* package ‘phonTools’ ... ** this is package ‘phonTools’ version ‘0.2-2.2’ ** package ‘phonTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phonTools) begin installing package ‘xdvir’ * installing *source* package ‘elastic’ ... ** this is package ‘elastic’ version ‘1.2.2’ ** package ‘elastic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (elastic) begin installing package ‘soundgen’ * installing *source* package ‘scico’ ... ** this is package ‘scico’ version ‘1.5.0’ ** package ‘scico’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scico) * installing *source* package ‘AGHmatrix’ ... ** this is package ‘AGHmatrix’ version ‘2.1.4’ ** package ‘AGHmatrix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AGHmatrix) * installing *source* package ‘NatureSounds’ ... ** this is package ‘NatureSounds’ version ‘1.0.5’ ** package ‘NatureSounds’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NatureSounds) * installing *source* package ‘orientlib’ ... ** this is package ‘orientlib’ version ‘0.10.5’ ** package ‘orientlib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function from function ‘rotmatrix’ in package ‘orientlib’ Creating a generic function from function ‘rotvector’ in package ‘orientlib’ Creating a generic function from function ‘eulerzyx’ in package ‘orientlib’ Creating a generic function from function ‘quaternion’ in package ‘orientlib’ Creating a generic function from function ‘skewvector’ in package ‘orientlib’ Creating a generic function from function ‘skewmatrix’ in package ‘orientlib’ Creating a generic function from function ‘eulerzxz’ in package ‘orientlib’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (orientlib) * installing *source* package ‘manipulateWidget’ ... ** this is package ‘manipulateWidget’ version ‘0.11.2’ ** package ‘manipulateWidget’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (manipulateWidget) * installing *source* package ‘CCA’ ... ** this is package ‘CCA’ version ‘1.2.2’ ** package ‘CCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CCA) * installing *source* package ‘StableEstim’ ... ** this is package ‘StableEstim’ version ‘2.4’ ** package ‘StableEstim’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (StableEstim) * installing *source* package ‘gamlss.cens’ ... ** this is package ‘gamlss.cens’ version ‘5.0-7’ ** package ‘gamlss.cens’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gamlss.cens) * installing *source* package ‘trackeR’ ... ** this is package ‘trackeR’ version ‘1.6.1’ ** package ‘trackeR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trackeR) * installing *source* package ‘monitoR’ ... ** this is package ‘monitoR’ version ‘1.2’ ** package ‘monitoR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monitoR) * installing *source* package ‘alr4’ ... ** this is package ‘alr4’ version ‘1.0.7’ ** package ‘alr4’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alr4) * installing *source* package ‘CBPS’ ... ** this is package ‘CBPS’ version ‘0.24’ ** package ‘CBPS’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CBPS) * installing *source* package ‘EstimationTools’ ... ** this is package ‘EstimationTools’ version ‘4.3.1’ ** package ‘EstimationTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EstimationTools) * installing *source* package ‘qpcR’ ... ** this is package ‘qpcR’ version ‘1.4-2’ ** package ‘qpcR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpmyeDHN/R.INSTALL38415514aa93f/qpcR/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c smth.c -o smth.o 'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. 'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o qpcR.so registerDynamicSymbol.o smth.o -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR 'LdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. 'RcppLdFlags' has not been needed since 2013 (!!) and may get removed in 2027. Please update your 'Makevars'. make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpmyeDHN/R.INSTALL38415514aa93f/qpcR/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-qpcR/00new/qpcR/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (qpcR) * installing *source* package ‘xdvir’ ... ** this is package ‘xdvir’ version ‘0.2-0’ ** package ‘xdvir’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/freetype2 -I/usr/include/libpng16 Using PKG_LIBS=-lfreetype ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp6TMWSh/R.INSTALL38496b303b906c/xdvir/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include/freetype2 -I/usr/include/libpng16 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c freetype.c -o freetype.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I/usr/include/freetype2 -I/usr/include/libpng16 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o xdvir.so freetype.o register.o -lfreetype -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp6TMWSh/R.INSTALL38496b303b906c/xdvir/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-xdvir/00new/xdvir/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xdvir) * installing *source* package ‘speaq’ ... ** this is package ‘speaq’ version ‘2.7.0’ ** package ‘speaq’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (speaq) * installing *source* package ‘wrassp’ ... ** this is package ‘wrassp’ version ‘1.0.6’ ** package ‘wrassp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUj1J9H/R.INSTALL383d0b452af009/wrassp/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/acf.c -o assp/acf.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dataobj.c -o assp/dataobj.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/freqconv.c -o assp/freqconv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/mhs.c -o assp/mhs.o assp/mhs.c: In function ‘computeMHS’: assp/mhs.c:448:12: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 448 | int FILE_IN, FILE_OUT, CREATED, VOICED; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/smp2dur.c -o assp/smp2dur.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspana.c -o assp/asspana.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/diff.c -o assp/diff.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/headers.c -o assp/headers.o assp/headers.c: In function ‘getAIFhdr’: assp/headers.c:881:12: warning: variable ‘blockSize’ set but not used [-Wunused-but-set-variable] 881 | uint32_t blockSize; | ^~~~~~~~~ assp/headers.c: In function ‘getCSLhdr’: assp/headers.c:1230:12: warning: variable ‘peakMag’ set but not used [-Wunused-but-set-variable] 1230 | int16_t peakMag; | ^~~~~~~ assp/headers.c: In function ‘getWAVhdr’: assp/headers.c:1827:22: warning: variable ‘lspPosMask’ set but not used [-Wunused-but-set-variable] 1827 | uint32_t byteRate, lspPosMask; | ^~~~~~~~~~ assp/headers.c:1827:12: warning: variable ‘byteRate’ set but not used [-Wunused-but-set-variable] 1827 | uint32_t byteRate, lspPosMask; | ^~~~~~~~ assp/headers.c: In function ‘putSSFFhdr’: assp/headers.c:2823:7: warning: unused variable ‘prev_header_length’ [-Wunused-variable] 2823 | int prev_header_length = strlen(header); | ^~~~~~~~~~~~~~~~~~ assp/headers.c: At top level: assp/headers.c:874:11: warning: ‘getAIFhdr’ defined but not used [-Wunused-function] 874 | LOCAL int getAIFhdr(DOBJ *dop) | ^~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/miscstring.c -o assp/miscstring.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/spectra.c -o assp/spectra.o assp/spectra.c: In function ‘freeSPECT_GD’: assp/spectra.c:734:13: warning: unused variable ‘gd’ [-Wunused-variable] 734 | SPECT_GD *gd; | ^~ assp/spectra.c: In function ‘getCepstrum’: assp/spectra.c:932:23: warning: unused variable ‘M’ [-Wunused-variable] 932 | register long n, N, M, L; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspfio.c -o assp/asspfio.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dsputils.c -o assp/dsputils.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/isgerman.c -o assp/isgerman.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrand.c -o assp/myrand.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/statistics.c -o assp/statistics.o assp/statistics.c: In function ‘statPrintHist’: assp/statistics.c:478:10: warning: unused variable ‘centre’ [-Wunused-variable] 478 | double centre; | ^~~~~~ assp/statistics.c:477:10: warning: unused variable ‘i’ [-Wunused-variable] 477 | size_t i; | ^ assp/statistics.c:476:14: warning: unused variable ‘nd1’ [-Wunused-variable] 476 | int nd, nd1; | ^~~ assp/statistics.c:476:10: warning: unused variable ‘nd’ [-Wunused-variable] 476 | int nd, nd1; | ^~ assp/statistics.c:475:10: warning: unused variable ‘format’ [-Wunused-variable] 475 | char format[32]; | ^~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspmess.c -o assp/asspmess.o assp/asspmess.c: In function ‘prtAsspMsg’: assp/asspmess.c:169:9: warning: unused variable ‘funcVal’ [-Wunused-variable] 169 | int funcVal; | ^~~~~~~ assp/asspmess.c:168:20: warning: unused variable ‘indent’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~~~~ assp/asspmess.c:168:15: warning: unused variable ‘bug’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ assp/asspmess.c:168:9: warning: unused variable ‘msg’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fft.c -o assp/fft.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/ksv.c -o assp/ksv.o assp/ksv.c: In function ‘computeKSV’: assp/ksv.c:503:20: warning: unused variable ‘n’ [-Wunused-variable] 503 | int err, nd, n, type; | ^ assp/ksv.c:503:16: warning: unused variable ‘nd’ [-Wunused-variable] 503 | int err, nd, n, type; | ^~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrint.c -o assp/myrint.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/trace.c -o assp/trace.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/aucheck.c -o assp/aucheck.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fgetl.c -o assp/fgetl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/labelobj.c -o assp/labelobj.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/numdecim.c -o assp/numdecim.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/winfuncs.c -o assp/winfuncs.o assp/winfuncs.c: In function ‘listWFs’: assp/winfuncs.c:1139:11: warning: unused variable ‘specs’ [-Wunused-variable] 1139 | WFDATA *specs; | ^~~~~ assp/winfuncs.c:1138:11: warning: unused variable ‘wPtr’ [-Wunused-variable] 1138 | WFLIST *wPtr; | ^~~~ assp/winfuncs.c:1137:14: warning: unused variable ‘m’ [-Wunused-variable] 1137 | int l, m; | ^ assp/winfuncs.c:1137:11: warning: unused variable ‘l’ [-Wunused-variable] 1137 | int l, m; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/auconv.c -o assp/auconv.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filter.c -o assp/filter.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/lpc.c -o assp/lpc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/parsepath.c -o assp/parsepath.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/zcr.c -o assp/zcr.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/bitarray.c -o assp/bitarray.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filters.c -o assp/filters.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/math.c -o assp/math.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rfc.c -o assp/rfc.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/chain.c -o assp/chain.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fmt.c -o assp/fmt.o assp/fmt.c:1795:11: warning: ‘printRaw’ defined but not used [-Wunused-function] 1795 | LOCAL int printRaw(FMTDATA *fPtr, long frameNr, int numFMT, DOBJ *dop) | ^~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/memswab.c -o assp/memswab.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rms.c -o assp/rms.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataobj.c -o dataobj.o dataobj.c: In function ‘dobj2AsspDataObj’: dataobj.c:168:21: warning: unused variable ‘genVar’ [-Wunused-variable] 168 | TSSFF_Generic *genVar = NULL; | ^~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:403:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 403 | int8_t *i8Ptr; | ^~~~~ dataobj.c:395:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 395 | int i, | ^ dataobj.c: In function ‘sexp2dobj’: dataobj.c:606:21: warning: unused variable ‘varNames’ [-Wunused-variable] 606 | varNames; | ^~~~~~~~ dataobj.c:600:21: warning: unused variable ‘numFields’ [-Wunused-variable] 600 | size_t numFields = -1; | ^~~~~~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:892:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 892 | int8_t *i8Ptr; | ^~~~~ dataobj.c:884:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 884 | int i, | ^ dataobj.c: At top level: dataobj.c:140:1: warning: ‘DObjFinalizer’ defined but not used [-Wunused-function] 140 | DObjFinalizer(SEXP dPtr) | ^~~~~~~~~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:411:21: warning: ‘Rans’ may be used uninitialized [-Wmaybe-uninitialized] 411 | double *Rans; | ^~~~ dataobj.c:412:21: warning: ‘Ians’ may be used uninitialized [-Wmaybe-uninitialized] 412 | int *Ians; | ^~~~ dataobj.c:402:21: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 402 | uint8_t *u8Ptr; | ^~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:931:30: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 931 | u8Ptr[n] = (int8_t) numPtr[m + n * dop->numRecords]; | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dataobj.c:891:21: note: ‘u8Ptr’ was declared here 891 | uint8_t *u8Ptr; | ^~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c performAssp.c -o performAssp.o performAssp.c: In function ‘computeFilter’: performAssp.c:1230:21: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 1230 | int FILE_IN, | ^~~~~~~ In file included from wrassp.h:5, from performAssp.c:1: performAssp.c: In function ‘performAssp’: /home/hornik/tmp/R-d-gcc-15/include/Rinternals.h:917:33: warning: ‘utilsPackage’ may be used uninitialized [-Wmaybe-uninitialized] 917 | #define eval Rf_eval performAssp.c:1187:13: note: in expansion of macro ‘eval’ 1187 | eval(R_fcall3, utilsPackage); | ^~~~ performAssp.c:489:9: note: ‘utilsPackage’ was declared here 489 | utilsPackage, /* to update the prograssbar */ | ^~~~~~~~~~~~ performAssp.c:1186:28: warning: ‘newVal’ may be used uninitialized [-Wmaybe-uninitialized] 1186 | INTEGER(newVal)[0] = i + 1; | ^ performAssp.c:490:9: note: ‘newVal’ was declared here 490 | newVal, | ^~~~~~ performAssp.c:1216:12: warning: ‘res’ may be used uninitialized [-Wmaybe-uninitialized] 1216 | return res; | ^~~ performAssp.c:487:21: note: ‘res’ was declared here 487 | res, | ^~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c types.c -o types.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wrassp_init.c -o wrassp_init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o wrassp.so assp/acf.o assp/dataobj.o assp/freqconv.o assp/mhs.o assp/smp2dur.o assp/asspana.o assp/diff.o assp/headers.o assp/miscstring.o assp/spectra.o assp/asspfio.o assp/dsputils.o assp/isgerman.o assp/myrand.o assp/statistics.o assp/asspmess.o assp/fft.o assp/ksv.o assp/myrint.o assp/trace.o assp/aucheck.o assp/fgetl.o assp/labelobj.o assp/numdecim.o assp/winfuncs.o assp/auconv.o assp/filter.o assp/lpc.o assp/parsepath.o assp/zcr.o assp/bitarray.o assp/filters.o assp/math.o assp/rfc.o assp/chain.o assp/fmt.o assp/memswab.o assp/rms.o dataobj.o performAssp.o types.o wrassp_init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUj1J9H/R.INSTALL383d0b452af009/wrassp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-wrassp/00new/wrassp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wrassp) * installing *source* package ‘chipPCR’ ... ** this is package ‘chipPCR’ version ‘1.0-2’ ** package ‘chipPCR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘qqline’ from package ‘stats’ in package ‘chipPCR’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (chipPCR) begin installing package ‘MBmca’ * installing *source* package ‘AdhereR’ ... ** this is package ‘AdhereR’ version ‘0.8.2’ ** package ‘AdhereR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AdhereR) * installing *source* package ‘rtdists’ ... ** this is package ‘rtdists’ version ‘0.11-5’ ** package ‘rtdists’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpKt04iB/R.INSTALL3840b972df6ec0/rtdists/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RFastDM.cpp -o RFastDM.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o rtdists.so RFastDM.o RcppExports.o init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpKt04iB/R.INSTALL3840b972df6ec0/rtdists/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-rtdists/00new/rtdists/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rtdists) * installing *source* package ‘Sim.DiffProc’ ... ** this is package ‘Sim.DiffProc’ version ‘5.0’ ** package ‘Sim.DiffProc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Sim.DiffProc) * installing *source* package ‘V8’ ... ** this is package ‘V8’ version ‘8.1.0’ ** using staged installation Found C++20 compiler: g++-15 Using CXXCPP=g++-15 -std=gnu++20 -E Using PKG_CFLAGS=-I/usr/include/v8 Using PKG_LIBS=-lv8 -lv8_libplatform Running feature test for pointer compression... Pointer compression not needed ** libs specified C++20 using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ using C++20 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxZqENd/R.INSTALL3844a74ff8ad1c/V8/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/v8 -DISNODEJS=12.4.254.21-node.39 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/include/v8 -DISNODEJS=12.4.254.21-node.39 -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c bindings.cpp -o bindings.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o V8.so RcppExports.o bindings.o -lv8 -lv8_libplatform -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxZqENd/R.INSTALL3844a74ff8ad1c/V8/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-V8/00new/V8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (V8) begin installing package ‘nodbi’ begin installing package ‘js’ * installing *source* package ‘spTimer’ ... ** this is package ‘spTimer’ version ‘3.3.4’ ** package ‘spTimer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeV3rVd/R.INSTALL3843823a935a0a/spTimer/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common.c -o common.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c covariance.c -o covariance.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation_xb_ar.c -o equation_xb_ar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation_xb_gp.c -o equation_xb_gp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation_xb_gpp.c -o equation_xb_gpp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c forecast_xb_ar.c -o forecast_xb_ar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c forecast_xb_gp.c -o forecast_xb_gp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c forecast_xb_gpp.c -o forecast_xb_gpp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gibbs_ar.c -o gibbs_ar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gibbs_gp.c -o gibbs_gp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gibbs_gpp.c -o gibbs_gpp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mathematics.c -o mathematics.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prediction_xb_ar.c -o prediction_xb_ar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prediction_xb_gp.c -o prediction_xb_gp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prediction_xb_gpp.c -o prediction_xb_gpp.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c randgenerator.c -o randgenerator.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c spTimer_init.c -o spTimer_init.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o spTimer.so common.o covariance.o equation_xb_ar.o equation_xb_gp.o equation_xb_gpp.o forecast_xb_ar.o forecast_xb_gp.o forecast_xb_gpp.o gibbs_ar.o gibbs_gp.o gibbs_gpp.o mathematics.o prediction_xb_ar.o prediction_xb_gp.o prediction_xb_gpp.o randgenerator.o spTimer_init.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeV3rVd/R.INSTALL3843823a935a0a/spTimer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spTimer/00new/spTimer/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spTimer) * installing *source* package ‘interleave’ ... ** this is package ‘interleave’ version ‘0.1.2’ ** package ‘interleave’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFkSx48/R.INSTALL383d047316f2c4/interleave/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -fpic -g -O2 -Wall -pedantic -mtune=native -c interleave.cpp -o interleave.o In file included from interleave.cpp:2: ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:246:9: warning: ‘n_input_coordinates’ may be used uninitialized [-Wmaybe-uninitialized] 246 | if( Rf_length( p ) != n_input_coordinates ) { | ^~ ../inst/include/interleave/primitives/primitives.hpp:149:14: note: ‘n_input_coordinates’ was declared here 149 | R_xlen_t n_input_coordinates; | ^~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:188, from ../inst/include/interleave/earcut/interleave.hpp:4, from interleave.cpp:1: In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]’, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:471:46, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:495:40, inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter::get(const T&) [with T = int; int RTYPE = 19]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:530:13, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:523:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:512:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&) [with T = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1164:24, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1146:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1128:50, inlined from ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’ at ../inst/include/interleave/primitives/primitives.hpp:286:30: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:448:41: warning: ‘stride’ may be used uninitialized [-Wmaybe-uninitialized] 448 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:158:9: note: ‘stride’ was declared here 158 | int stride; | ^~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -fpic -g -O2 -Wall -pedantic -mtune=native -c tests.cpp -o tests.o In file included from tests.cpp:5: ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:246:9: warning: ‘n_input_coordinates’ may be used uninitialized [-Wmaybe-uninitialized] 246 | if( Rf_length( p ) != n_input_coordinates ) { | ^~ ../inst/include/interleave/primitives/primitives.hpp:149:14: note: ‘n_input_coordinates’ was declared here 149 | R_xlen_t n_input_coordinates; | ^~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:188, from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27, from tests.cpp:1: In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]’, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:471:46, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:495:40, inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter::get(const T&) [with T = int; int RTYPE = 19]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:530:13, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:523:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:512:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&) [with T = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1164:24, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1170:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1146:29, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1128:50, inlined from ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’ at ../inst/include/interleave/primitives/primitives.hpp:286:30: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:448:41: warning: ‘stride’ may be used uninitialized [-Wmaybe-uninitialized] 448 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:158:9: note: ‘stride’ was declared here 158 | int stride; | ^~~~~~ g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o interleave.so RcppExports.o interleave.o tests.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFkSx48/R.INSTALL383d047316f2c4/interleave/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-interleave/00new/interleave/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (interleave) * installing *source* package ‘js’ ... ** this is package ‘js’ version ‘1.2.1’ ** package ‘js’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (js) * installing *source* package ‘soundgen’ ... ** this is package ‘soundgen’ version ‘2.9.0’ ** package ‘soundgen’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (soundgen) * installing *source* package ‘predicts’ ... ** this is package ‘predicts’ version ‘0.1-19’ ** package ‘predicts’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (predicts) * installing *source* package ‘nodbi’ ... ** this is package ‘nodbi’ version ‘0.14.0’ ** package ‘nodbi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nodbi) * installing *source* package ‘MBmca’ ... ** this is package ‘MBmca’ version ‘1.1-0’ ** package ‘MBmca’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MBmca) * installing *source* package ‘colourvalues’ ... ** this is package ‘colourvalues’ version ‘0.3.11’ ** package ‘colourvalues’ successfully unpacked and MD5 sums checked ** using staged installation ** libs specified C++17 using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRQLdad/R.INSTALL383d001d22afb7/colourvalues/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ColourValues.cpp -o ColourValues.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConvertColours.cpp -o ConvertColours.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c alpha.cpp -o alpha.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c format.cpp -o format.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c list.cpp -o list.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c palette_utils.cpp -o palette_utils.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c palettes.cpp -o palettes.o g++-15 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c scale.cpp -o scale.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o colourvalues.so ColourValues.o ConvertColours.o RcppExports.o alpha.o format.o list.o palette_utils.o palettes.o scale.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRQLdad/R.INSTALL383d001d22afb7/colourvalues/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-colourvalues/00new/colourvalues/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (colourvalues) begin installing package ‘spatialwidget’ * installing *source* package ‘bioacoustics’ ... ** this is package ‘bioacoustics’ version ‘0.2.10’ ** package ‘bioacoustics’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-15 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether gcc-15 accepts -g... yes checking for gcc-15 option to enable C11 features... none needed checking whether the compiler supports GNU C++... yes checking whether g++-15 -std=gnu++20 accepts -g... yes checking for g++-15 -std=gnu++20 option to enable C++11 features... none needed configure: CC: gcc-15 configure: CXX: g++-15 -std=gnu++20 checking for cmake... /usr/bin/cmake configure: Found cmake: /usr/bin/cmake checking for OpenMP support... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for fftw3.h... yes checking for library containing fftw_plan_r2r_1d... -lfftw3 configure: Suitable fftw3 library found. configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmplrniRh/R.INSTALL38447342f37b21/bioacoustics/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bat_bioacoustics.cpp -o bat_bioacoustics.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bat_classify.cpp -o bat_classify.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_analyse.cpp -o bb_analyse.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_detect.cpp -o bb_detect.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_extract.cpp -o bb_extract.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_blob_finder.cpp -o bc_blob_finder.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_features.cpp -o bc_features.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_img_processing.cpp -o bc_img_processing.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c fft.cpp -o fft.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c read_wac.cpp -o read_wac.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -fpic -fpic -g -O2 -Wall -pedantic -mtune=native -c spectro.cpp -o spectro.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o bioacoustics.so RcppExports.o bat_bioacoustics.o bat_classify.o bb_analyse.o bb_detect.o bb_extract.o bc_blob_finder.o bc_features.o bc_img_processing.o fft.o read_wac.o spectro.o -lfftw3 -fopenmp -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmplrniRh/R.INSTALL38447342f37b21/bioacoustics/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bioacoustics/00new/bioacoustics/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bioacoustics) * installing *source* package ‘spatialwidget’ ... ** this is package ‘spatialwidget’ version ‘0.2.6’ ** package ‘spatialwidget’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEnQdhi/R.INSTALL3851d342461989/spatialwidget/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c colour.cpp -o colour.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c data_construction.cpp -o data_construction.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c geojson.cpp -o geojson.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c geometrycollection.cpp -o geometrycollection.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c legends.cpp -o legends.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c mesh.cpp -o mesh.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c palette.cpp -o palette.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c parameters.cpp -o parameters.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c spatialwidget_defaults.cpp -o spatialwidget_defaults.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c widget_line.cpp -o widget_line.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c widget_point.cpp -o widget_point.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c widget_polygon.cpp -o widget_polygon.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o spatialwidget.so RcppExports.o colour.o data_construction.o geojson.o geometrycollection.o legends.o mesh.o palette.o parameters.o spatialwidget_defaults.o utils.o widget_line.o widget_point.o widget_polygon.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEnQdhi/R.INSTALL3851d342461989/spatialwidget/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spatialwidget/00new/spatialwidget/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spatialwidget) begin installing package ‘mapdeck’ * installing *source* package ‘mapdeck’ ... ** this is package ‘mapdeck’ version ‘0.3.6’ ** package ‘mapdeck’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-16) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMXeygV/R.INSTALL385559fa8c797/mapdeck/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c aggregate.cpp -o aggregate.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c geojson.cpp -o geojson.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c mesh.cpp -o mesh.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c od.cpp -o od.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c path.cpp -o path.o path.cpp: In function ‘SEXPREC* rcpp_path_interleaved(Rcpp::DataFrame, Rcpp::List, Rcpp::IntegerVector, int, std::string)’: path.cpp:102:13: warning: unused variable ‘n_coordinates’ [-Wunused-variable] 102 | int n_coordinates = coordinates.length(); | ^~~~~~~~~~~~~ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c point.cpp -o point.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c polygon.cpp -o polygon.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c text.cpp -o text.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o mapdeck.so RcppExports.o aggregate.o geojson.o mesh.o od.o path.o point.o polygon.o text.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMXeygV/R.INSTALL385559fa8c797/mapdeck/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mapdeck/00new/mapdeck/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mapdeck) checking V8_8.1.0.tar.gz ... checking adepro_4.2.7.tar.gz ... checking ajv_1.0.0.tar.gz ... checking AdhereRViz_0.2.2.tar.gz ... checking almanac_1.0.0.tar.gz ... checking asciicast_2.3.1.tar.gz ... checking audubon_0.6.2.tar.gz ... checking badgen_1.0.1.tar.gz ... checking colormap_0.1.4.tar.gz ... checking concaveman_1.2.0.tar.gz ... checking covatest_1.2.4.tar.gz ... checking cppcheckR_1.0.0.tar.gz ... checking daff_1.1.1.tar.gz ... checking ctrdata_1.26.1.tar.gz ... checking dagitty_0.3-4.tar.gz ... checking DiagrammeRsvg_0.1.tar.gz ... checking DOT_0.1.tar.gz ... checking dtrackr_0.5.0.tar.gz ... checking emuR_2.6.0.tar.gz ... checking geojsonio_0.11.3.tar.gz ... checking gfer_0.1.12.tar.gz ... checking h3jsr_1.3.1.tar.gz ... checking ical_0.1.6.tar.gz ... checking js_1.2.1.tar.gz ... checking JSconsole_0.1.0.tar.gz ... checking jsonld_2.2.1.tar.gz ... checking jsonNormalize_1.0.0.tar.gz ... checking jsonvalidate_1.5.0.tar.gz ... checking S7schema_0.1.0.tar.gz ... checking leaflet.providers_3.0.0.tar.gz ... checking usincometaxes_0.7.1.tar.gz ... checking metabodecon_1.6.2.tar.gz ... checking matRiks_0.1.5.tar.gz ... checking rless_0.1.1.tar.gz ... checking altair_4.2.3.tar.gz ... checking glmm_1.4.5.tar.gz ... checking rmapshaper_0.6.0.tar.gz ... checking mousetRajectory_0.2.1.tar.gz ... checking openrouteservice_0.6.2.tar.gz ... checking tweetcheck_0.1.0.tar.gz ... checking hydroState_0.2.0.0.tar.gz ... checking toml_1.0.0.tar.gz ... checking rjade_0.1.1.tar.gz ... checking randomcoloR_1.1.0.1.tar.gz ... checking uaparserjs_0.3.7.tar.gz ... checking RelDists_1.0.1.tar.gz ... checking shinyChakraUI_1.1.1.tar.gz ... checking nodbi_0.14.0.tar.gz ... checking rgl2gltf_1.0.7.tar.gz ... checking rstanarm_2.32.2.tar.gz ... checking juicyjuice_0.1.0.tar.gz ... checking sim2Dpredictr_0.1.1.tar.gz ... checking reactR_0.6.1.tar.gz ... checking bracer_1.2.2.tar.gz ... checking katex_1.5.0.tar.gz ... checking pmwg_0.2.7.tar.gz ... checking reactable_0.4.5.tar.gz ... checking nomnoml_0.3.0.tar.gz ... checking causalOT_1.0.4.tar.gz ... checking EstimationTools_4.3.1.tar.gz ... checking sketch_1.1.20.3.tar.gz ... checking SpatMCA_1.0.7.tar.gz ... checking rgl_1.3.36.tar.gz ... checking trackeRapp_1.2.tar.gz ... checking TempStable_0.2.2.tar.gz ... checking nscancor_0.7.0-6.tar.gz ... checking phyloregion_1.0.9.tar.gz ... checking rstan_2.32.7.tar.gz ... checking prismjs_2.1.0.tar.gz ... checking animate_0.3.9.4.tar.gz ... checking RDML_1.1.tar.gz ... checking shortIRT_1.0.0.tar.gz ... checking rsvddpd_1.0.1.tar.gz ... checking SpatPCA_1.3.8.tar.gz ... checking ASRgenomics_1.1.5.tar.gz ... checking vegawidget_0.5.0.tar.gz ... checking warbleR_1.1.37.tar.gz ... checking TDCM_0.1.0.tar.gz ... Depends: Package: V8 Imports: Rcpp (>= 0.12.12), jsonlite (>= 1.0), curl (>= 1.0), utils LinkingTo: Rcpp Timings: user system elapsed V8 56.771 6.475 66.053 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 4 73 Check results summary: V8 ... OK rdepends_adepro ... OK rdepends_AdhereRViz ... OK rdepends_ajv ... OK rdepends_almanac ... OK rdepends_altair ... OK rdepends_animate ... NOTE * checking DESCRIPTION meta-information ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_asciicast ... OK rdepends_ASRgenomics ... OK rdepends_audubon ... OK rdepends_badgen ... OK rdepends_bracer ... OK rdepends_causalOT ... OK rdepends_colormap ... OK rdepends_concaveman ... OK rdepends_covatest ... OK rdepends_cppcheckR ... OK rdepends_ctrdata ... OK rdepends_daff ... OK rdepends_dagitty ... OK rdepends_DiagrammeRsvg ... OK rdepends_DOT ... NOTE * checking for non-standard things in the check directory ... NOTE rdepends_dtrackr ... OK rdepends_emuR ... OK rdepends_EstimationTools ... OK rdepends_geojsonio ... OK rdepends_gfer ... OK rdepends_glmm ... OK rdepends_h3jsr ... OK rdepends_hydroState ... OK rdepends_ical ... OK rdepends_js ... OK rdepends_JSconsole ... OK rdepends_jsonld ... OK rdepends_jsonNormalize ... OK rdepends_jsonvalidate ... OK rdepends_juicyjuice ... OK rdepends_katex ... OK rdepends_leaflet.providers ... OK rdepends_matRiks ... OK rdepends_metabodecon ... OK rdepends_mousetRajectory ... OK rdepends_nodbi ... OK rdepends_nomnoml ... OK rdepends_nscancor ... OK rdepends_openrouteservice ... OK rdepends_phyloregion ... OK rdepends_pmwg ... OK rdepends_prismjs ... OK rdepends_randomcoloR ... OK rdepends_RDML ... OK rdepends_reactable ... OK rdepends_reactR ... OK rdepends_RelDists ... OK rdepends_rgl ... OK rdepends_rgl2gltf ... OK rdepends_rjade ... OK rdepends_rless ... OK rdepends_rmapshaper ... OK rdepends_rstan ... OK rdepends_rstanarm ... OK rdepends_rsvddpd ... OK rdepends_S7schema ... OK rdepends_shinyChakraUI ... OK rdepends_shortIRT ... OK rdepends_sim2Dpredictr ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_sketch ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_SpatMCA ... OK rdepends_SpatPCA ... OK rdepends_TDCM ... OK rdepends_TempStable ... OK rdepends_toml ... OK rdepends_trackeRapp ... OK rdepends_tweetcheck ... OK rdepends_uaparserjs ... OK rdepends_usincometaxes ... OK rdepends_vegawidget ... OK rdepends_warbleR ... OK Check results changes: Package: dagitty Check: CRAN incoming feasibility Old result: NOTE Package: DOT Check: CRAN incoming feasibility Old result: NOTE Package: JSconsole Check: CRAN incoming feasibility Old result: NOTE Package: randomcoloR Check: CRAN incoming feasibility Old result: NOTE Package: rjade Check: CRAN incoming feasibility Old result: NOTE Package: sim2Dpredictr Check: CRAN incoming feasibility Old result: NOTE Package: sketch Check: CRAN incoming feasibility Old result: NOTE Package: TempStable Check: CRAN incoming feasibility Old result: NOTE