downloading reverse dependencies ... downloading adepro_4.2.7.tar.gz ... ok downloading AdhereRViz_0.2.1.tar.gz ... ok downloading ajv_1.0.0.tar.gz ... ok downloading almanac_1.0.0.tar.gz ... ok downloading asciicast_2.3.1.tar.gz ... ok downloading audubon_0.5.2.tar.gz ... ok downloading badgen_1.0.1.tar.gz ... ok downloading colormap_0.1.4.tar.gz ... ok downloading concaveman_1.1.0.tar.gz ... ok downloading covatest_1.2.4.tar.gz ... ok downloading cppcheckR_1.0.0.tar.gz ... ok downloading ctrdata_1.22.2.tar.gz ... ok downloading daff_1.1.1.tar.gz ... ok downloading dagitty_0.3-4.tar.gz ... ok downloading DiagrammeRsvg_0.1.tar.gz ... ok downloading DOT_0.1.tar.gz ... ok downloading dtrackr_0.4.6.tar.gz ... ok downloading emuR_2.5.0.tar.gz ... ok downloading geojsonio_0.11.3.tar.gz ... ok downloading gfer_0.1.12.tar.gz ... ok downloading h3jsr_1.3.1.tar.gz ... ok downloading ical_0.1.6.tar.gz ... ok downloading js_1.2.1.tar.gz ... ok downloading JSconsole_0.1.0.tar.gz ... ok downloading jsonld_2.2.1.tar.gz ... ok downloading jsonNormalize_1.0.0.tar.gz ... ok downloading jsonvalidate_1.5.0.tar.gz ... ok downloading juicyjuice_0.1.0.tar.gz ... ok downloading katex_1.5.0.tar.gz ... ok downloading nodbi_0.13.0.tar.gz ... ok downloading openrouteservice_0.6.2.tar.gz ... ok downloading prismjs_2.1.0.tar.gz ... ok downloading randomcoloR_1.1.0.1.tar.gz ... ok downloading rjade_0.1.1.tar.gz ... ok downloading rless_0.1.1.tar.gz ... ok downloading rmapshaper_0.5.0.tar.gz ... ok downloading sketch_1.1.20.3.tar.gz ... ok downloading trackeRapp_1.2.tar.gz ... ok downloading tweetcheck_0.1.0.tar.gz ... ok downloading uaparserjs_0.3.5.tar.gz ... ok downloading usincometaxes_0.7.1.tar.gz ... ok downloading altair_4.2.3.tar.gz ... ok downloading animate_0.3.9.4.tar.gz ... ok downloading ASRgenomics_1.1.4.tar.gz ... ok downloading bracer_1.2.2.tar.gz ... ok downloading causalOT_1.0.2.tar.gz ... ok downloading emhawkes_0.9.7.tar.gz ... ok downloading EstimationTools_4.0.0.tar.gz ... ok downloading glmm_1.4.5.tar.gz ... ok downloading inldata_1.2.7.tar.gz ... ok downloading leaflet.providers_2.0.0.tar.gz ... ok downloading matRiks_0.1.3.tar.gz ... ok downloading mlms_1.0.2.tar.gz ... ok downloading mousetRajectory_0.2.1.tar.gz ... ok downloading nomnoml_0.3.0.tar.gz ... ok downloading nscancor_0.7.0-6.tar.gz ... ok downloading phyloregion_1.0.8.tar.gz ... ok downloading pmwg_0.2.7.tar.gz ... ok downloading prettifyAddins_2.6.1.tar.gz ... ok downloading RDML_1.0.tar.gz ... ok downloading reactable_0.4.4.tar.gz ... ok downloading reactR_0.6.1.tar.gz ... ok downloading RelDists_1.0.0.tar.gz ... ok downloading rgl_1.3.18.tar.gz ... ok downloading rgl2gltf_1.0.7.tar.gz ... ok downloading rstan_2.32.7.tar.gz ... ok downloading rstanarm_2.32.1.tar.gz ... ok downloading shinyChakraUI_1.1.1.tar.gz ... ok downloading shortIRT_0.1.3.tar.gz ... ok downloading sim2Dpredictr_0.1.1.tar.gz ... ok downloading SpatMCA_1.0.4.tar.gz ... ok downloading SpatPCA_1.3.5.tar.gz ... ok downloading TDCM_0.1.0.tar.gz ... ok downloading TempStable_0.2.2.tar.gz ... ok downloading vegawidget_0.5.0.tar.gz ... ok downloading warbleR_1.1.34.tar.gz ... ok installing dependencies ‘AdequacyModel’, ‘AdhereR’, ‘AGHmatrix’, ‘alphashape3d’, ‘autoimage’, ‘bioacoustics’, ‘CBPS’, ‘CCA’, ‘CCP’, ‘chipPCR’, ‘compare’, ‘condMVNorm’, ‘connectapi’, ‘decor’, ‘elastic’, ‘EstimationTools’, ‘gamlss.cens’, ‘gaussquad’, ‘gistr’, ‘gsheet’, ‘inlcolor’, ‘inldata’, ‘js’, ‘kfigr’, ‘manipulateWidget’, ‘mapdeck’, ‘maptpx’, ‘MBmca’, ‘monitoR’, ‘NatureSounds’, ‘nodbi’, ‘orientlib’, ‘predicts’, ‘qpcR’, ‘rkeops’, ‘rtdists’, ‘scico’, ‘shinyMolBio’, ‘Sim.DiffProc’, ‘sofa’, ‘soundgen’, ‘spTimer’, ‘StableEstim’, ‘superheat’, ‘trackeR’, ‘tripack’, ‘V8’, ‘vegawidget’, ‘webmap’, ‘wrassp’, ‘XRJulia’ Warning: packages ‘rkeops’, ‘qpcR’ are not available for this version of R Versions of these packages for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘webp’, ‘colourvalues’, ‘interleave’, ‘spatialwidget’, ‘XR’, ‘outliers’, ‘ptw’, ‘Rfit’, ‘RDML’, ‘phonTools’, ‘nonlinearTseries’ begin installing package ‘webp’ begin installing package ‘colourvalues’ begin installing package ‘XR’ begin installing package ‘interleave’ begin installing package ‘outliers’ begin installing package ‘Rfit’ begin installing package ‘ptw’ begin installing package ‘RDML’ begin installing package ‘phonTools’ begin installing package ‘nonlinearTseries’ begin installing package ‘decor’ begin installing package ‘CCP’ begin installing package ‘wrassp’ begin installing package ‘compare’ begin installing package ‘gistr’ begin installing package ‘gsheet’ begin installing package ‘sofa’ begin installing package ‘elastic’ begin installing package ‘trackeR’ begin installing package ‘vegawidget’ begin installing package ‘AGHmatrix’ begin installing package ‘superheat’ begin installing package ‘CBPS’ begin installing package ‘gaussquad’ begin installing package ‘autoimage’ begin installing package ‘AdequacyModel’ begin installing package ‘connectapi’ begin installing package ‘inlcolor’ * installing *source* package ‘gsheet’ ... ** this is package ‘gsheet’ version ‘0.4.6’ ** package ‘gsheet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gsheet) begin installing package ‘webmap’ * installing *source* package ‘CCP’ ... ** this is package ‘CCP’ version ‘1.2’ ** package ‘CCP’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CCP) begin installing package ‘inldata’ * installing *source* package ‘inlcolor’ ... ** this is package ‘inlcolor’ version ‘1.0.6’ ** package ‘inlcolor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (inlcolor) begin installing package ‘CCA’ * installing *source* package ‘AdequacyModel’ ... ** this is package ‘AdequacyModel’ version ‘2.0.0’ ** package ‘AdequacyModel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AdequacyModel) begin installing package ‘maptpx’ * installing *source* package ‘webp’ ... ** this is package ‘webp’ version ‘1.3.0’ ** package ‘webp’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/webp Using PKG_LIBS=-lwebp ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZJVHJx/R.INSTALL103dff315c43b6/webp/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/webp -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c webp.c -o webp.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o webp.so register.o webp.o -lwebp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZJVHJx/R.INSTALL103dff315c43b6/webp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-webp/00new/webp/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (webp) begin installing package ‘predicts’ * installing *source* package ‘outliers’ ... ** this is package ‘outliers’ version ‘0.15’ ** package ‘outliers’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (outliers) begin installing package ‘condMVNorm’ * installing *source* package ‘gaussquad’ ... ** this is package ‘gaussquad’ version ‘1.0-3’ ** package ‘gaussquad’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gaussquad) begin installing package ‘rtdists’ * installing *source* package ‘compare’ ... ** this is package ‘compare’ version ‘0.2-6’ ** package ‘compare’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (compare) begin installing package ‘kfigr’ * installing *source* package ‘webmap’ ... ** this is package ‘webmap’ version ‘1.1.1’ ** package ‘webmap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (webmap) begin installing package ‘gamlss.cens’ * installing *source* package ‘superheat’ ... ** this is package ‘superheat’ version ‘0.1.0’ ** package ‘superheat’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (superheat) begin installing package ‘orientlib’ * installing *source* package ‘Rfit’ ... ** this is package ‘Rfit’ version ‘0.27.0’ ** package ‘Rfit’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFaRbxV/R.INSTALL103e2a6e540223/Rfit/src' gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hfuncd.f -o hfuncd.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c hubcor.f -o hubcor.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c lin3.f -o lin3.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c nscale.f -o nscale.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o Rfit.so hfuncd.o hubcor.o init.o lin3.o nscale.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFaRbxV/R.INSTALL103e2a6e540223/Rfit/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rfit/00new/Rfit/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rfit) begin installing package ‘tripack’ * installing *source* package ‘condMVNorm’ ... ** this is package ‘condMVNorm’ version ‘2025.1’ ** package ‘condMVNorm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (condMVNorm) begin installing package ‘alphashape3d’ * installing *source* package ‘sofa’ ... ** this is package ‘sofa’ version ‘0.4.0’ ** package ‘sofa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sofa) begin installing package ‘manipulateWidget’ * installing *source* package ‘vegawidget’ ... ** this is package ‘vegawidget’ version ‘0.5.0’ ** package ‘vegawidget’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vegawidget) begin installing package ‘spTimer’ * installing *source* package ‘ptw’ ... ** this is package ‘ptw’ version ‘1.9-16’ ** package ‘ptw’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZ29ABd/R.INSTALL103e2233c5703b/ptw/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c approx.c -o approx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c register.c -o register.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c smth.c -o smth.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wcc.c -o wcc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wccStick.c -o wccStick.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o ptw.so approx.o register.o smth.o wcc.o wccStick.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZ29ABd/R.INSTALL103e2233c5703b/ptw/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-ptw/00new/ptw/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ptw) begin installing package ‘scico’ * installing *source* package ‘autoimage’ ... ** this is package ‘autoimage’ version ‘2.2.3’ ** package ‘autoimage’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (autoimage) begin installing package ‘StableEstim’ * installing *source* package ‘gistr’ ... ** this is package ‘gistr’ version ‘0.9.0’ ** package ‘gistr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gistr) begin installing package ‘NatureSounds’ * installing *source* package ‘kfigr’ ... ** this is package ‘kfigr’ version ‘1.2.1’ ** package ‘kfigr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kfigr) begin installing package ‘monitoR’ * installing *source* package ‘decor’ ... ** this is package ‘decor’ version ‘1.0.2’ ** package ‘decor’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpG3LVLp/R.INSTALL103e46139aa9e7/decor/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c blank_comments.cpp -o blank_comments.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c parse_cpp_function.cpp -o parse_cpp_function.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o decor.so blank_comments.o init.o parse_cpp_function.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpG3LVLp/R.INSTALL103e46139aa9e7/decor/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-decor/00new/decor/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (decor) begin installing package ‘bioacoustics’ * installing *source* package ‘phonTools’ ... ** this is package ‘phonTools’ version ‘0.2-2.2’ ** package ‘phonTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phonTools) begin installing package ‘Sim.DiffProc’ * installing *source* package ‘maptpx’ ... ** this is package ‘maptpx’ version ‘1.9-7’ ** package ‘maptpx’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5SrlEe/R.INSTALL1041d63459aee4/maptpx/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c latools.c -o latools.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rhelp.c -o rhelp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DRPRINT -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c topics.c -o topics.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o maptpx.so init.o latools.o rhelp.o topics.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5SrlEe/R.INSTALL1041d63459aee4/maptpx/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-maptpx/00new/maptpx/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maptpx) begin installing package ‘V8’ * installing *source* package ‘XR’ ... ** this is package ‘XR’ version ‘0.7.2’ ** package ‘XR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XR) begin installing package ‘AdhereR’ * installing *source* package ‘elastic’ ... ** this is package ‘elastic’ version ‘1.2.0’ ** package ‘elastic’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (elastic) begin installing package ‘XRJulia’ * installing *source* package ‘AGHmatrix’ ... ** this is package ‘AGHmatrix’ version ‘2.1.4’ ** package ‘AGHmatrix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AGHmatrix) begin installing package ‘chipPCR’ * installing *source* package ‘scico’ ... ** this is package ‘scico’ version ‘1.5.0’ ** package ‘scico’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scico) begin installing package ‘EstimationTools’ * installing *source* package ‘orientlib’ ... ** this is package ‘orientlib’ version ‘0.10.5’ ** package ‘orientlib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function from function ‘rotmatrix’ in package ‘orientlib’ Creating a generic function from function ‘rotvector’ in package ‘orientlib’ Creating a generic function from function ‘eulerzyx’ in package ‘orientlib’ Creating a generic function from function ‘quaternion’ in package ‘orientlib’ Creating a generic function from function ‘skewvector’ in package ‘orientlib’ Creating a generic function from function ‘skewmatrix’ in package ‘orientlib’ Creating a generic function from function ‘eulerzxz’ in package ‘orientlib’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (orientlib) * installing *source* package ‘NatureSounds’ ... ** this is package ‘NatureSounds’ version ‘1.0.5’ ** package ‘NatureSounds’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (NatureSounds) * installing *source* package ‘alphashape3d’ ... ** this is package ‘alphashape3d’ version ‘1.3.2’ ** package ‘alphashape3d’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyuCzps/R.INSTALL1043eb6637e529/alphashape3d/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c alphashape3d.c -o alphashape3d.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c insideashape.c -o insideashape.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c surfaceNormals.c -o surfaceNormals.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o alphashape3d.so alphashape3d.o init.o insideashape.o surfaceNormals.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyuCzps/R.INSTALL1043eb6637e529/alphashape3d/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-alphashape3d/00new/alphashape3d/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alphashape3d) * installing *source* package ‘tripack’ ... ** this is package ‘tripack’ version ‘1.3-9.3’ ** package ‘tripack’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSfGM8q/R.INSTALL1043a167ca2c08/tripack/src' gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c dsos.f -o dsos.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c inhull.f -o inhull.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c left.f -o left.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c qsort.f -o qsort.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c tripack.f -o tripack.o tripack.f:3804:72: 3804 | . (YB-YA)*(YC-YA) .GE. 0. | 1 Warning: Obsolescent feature: Statement function at (1) tripack.f:4336:32: 4336 | SUBROUTINE TRLPRT (NCC,LCT,N,X,Y,NROW,NT,LTRI,LOUT, | 1 Warning: Unused dummy argument ‘lct’ at (1) [-Wunused-dummy-argument] tripack.f:4336:51: 4336 | SUBROUTINE TRLPRT (NCC,LCT,N,X,Y,NROW,NT,LTRI,LOUT, | 1 Warning: Unused dummy argument ‘ltri’ at (1) [-Wunused-dummy-argument] tripack.f:4336:28: 4336 | SUBROUTINE TRLPRT (NCC,LCT,N,X,Y,NROW,NT,LTRI,LOUT, | 1 Warning: Unused dummy argument ‘ncc’ at (1) [-Wunused-dummy-argument] tripack.f:4336:36: 4336 | SUBROUTINE TRLPRT (NCC,LCT,N,X,Y,NROW,NT,LTRI,LOUT, | 1 Warning: Unused dummy argument ‘x’ at (1) [-Wunused-dummy-argument] tripack.f:4336:38: 4336 | SUBROUTINE TRLPRT (NCC,LCT,N,X,Y,NROW,NT,LTRI,LOUT, | 1 Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument] tripack.f:5370:51: 5370 | . N,X,Y,LIST,LPTR,LEND,TITLE, | 1 Warning: Unused dummy argument ‘title’ at (1) [-Wunused-dummy-argument] tripack.f:5890:15: 5890 | INTEGER I, INC, K, LP, LPL, LUN, NA, NABOR(100), NB, | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] tripack.f:5833:32: 5833 | SUBROUTINE TRPRNT (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘lcc’ at (1) [-Wunused-dummy-argument] tripack.f:5833:28: 5833 | SUBROUTINE TRPRNT (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘ncc’ at (1) [-Wunused-dummy-argument] tripack.f:5833:36: 5833 | SUBROUTINE TRPRNT (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘x’ at (1) [-Wunused-dummy-argument] tripack.f:5833:38: 5833 | SUBROUTINE TRPRNT (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument] tripack.f:2308:14: 2308 | 5 IF (NK .LT. ILAST) THEN | ^ Warning: ‘ilast’ may be used uninitialized [-Wmaybe-uninitialized] tripack.f:2226:29: 2226 | INTEGER I, IFRST, ILAST, J, K, KM1, LCC1, LM1, LP, | ^ note: ‘ilast’ was declared here tripack.f:2485:72: 2485 | NPTS(L) = NL | ^ Warning: ‘nl’ may be used uninitialized [-Wmaybe-uninitialized] tripack.f:2228:30: 2228 | . NKBAK, NKFOR, NL, NN | ^ note: ‘nl’ was declared here tripack.f:4936:72: 4936 | NEXT(I0) = NEXTI | ^ Warning: ‘i0’ may be used uninitialized [-Wmaybe-uninitialized] tripack.f:4719:19: 4719 | INTEGER I, I0, J, K, KM1, LCC(1), LP, LPL, NCC, NEXTI, | ^ note: ‘i0’ was declared here gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c troutp.f -o troutp.o troutp.f:128:5: 128 | 110 FORMAT (1X,10X,'*** N IS OUTSIDE ITS VALID', | 1 Warning: Label 110 at (1) defined but not used [-Wunused-label] troutp.f:61:15: 61 | INTEGER I, INC, K, LP, LPL, LUN, | 1 Warning: Unused variable ‘i’ declared at (1) [-Wunused-variable] troutp.f:1:32: 1 | SUBROUTINE TROUTP (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘lcc’ at (1) [-Wunused-dummy-argument] troutp.f:1:28: 1 | SUBROUTINE TROUTP (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘ncc’ at (1) [-Wunused-dummy-argument] troutp.f:1:36: 1 | SUBROUTINE TROUTP (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘x’ at (1) [-Wunused-dummy-argument] troutp.f:1:38: 1 | SUBROUTINE TROUTP (NCC,LCC,N,X,Y,LIST,LPTR,LEND,LOUT, | 1 Warning: Unused dummy argument ‘y’ at (1) [-Wunused-dummy-argument] gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c troutq.f -o troutq.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c vleft.f -o vleft.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c voronoi.f -o voronoi.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o tripack.so dsos.o inhull.o init.o left.o qsort.o tripack.o troutp.o troutq.o vleft.o voronoi.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSfGM8q/R.INSTALL1043a167ca2c08/tripack/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-tripack/00new/tripack/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tripack) * installing *source* package ‘manipulateWidget’ ... ** this is package ‘manipulateWidget’ version ‘0.11.1’ ** package ‘manipulateWidget’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (manipulateWidget) * installing *source* package ‘gamlss.cens’ ... ** this is package ‘gamlss.cens’ version ‘5.0-7’ ** package ‘gamlss.cens’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gamlss.cens) * installing *source* package ‘CCA’ ... ** this is package ‘CCA’ version ‘1.2.2’ ** package ‘CCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CCA) * installing *source* package ‘XRJulia’ ... ** this is package ‘XRJulia’ version ‘0.9.0.1’ ** package ‘XRJulia’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XRJulia) * installing *source* package ‘CBPS’ ... ** this is package ‘CBPS’ version ‘0.23’ ** package ‘CBPS’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CBPS) * installing *source* package ‘trackeR’ ... ** this is package ‘trackeR’ version ‘1.6.0’ ** package ‘trackeR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (trackeR) * installing *source* package ‘connectapi’ ... ** this is package ‘connectapi’ version ‘0.7.0’ ** package ‘connectapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (connectapi) * installing *source* package ‘monitoR’ ... ** this is package ‘monitoR’ version ‘1.2’ ** package ‘monitoR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (monitoR) * installing *source* package ‘StableEstim’ ... ** this is package ‘StableEstim’ version ‘2.3’ ** package ‘StableEstim’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (StableEstim) * installing *source* package ‘EstimationTools’ ... ** this is package ‘EstimationTools’ version ‘4.0.0’ ** package ‘EstimationTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EstimationTools) * installing *source* package ‘wrassp’ ... ** this is package ‘wrassp’ version ‘1.0.5’ ** package ‘wrassp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpolSKOm/R.INSTALL103e396a4e33f4/wrassp/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/acf.c -o assp/acf.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dataobj.c -o assp/dataobj.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/freqconv.c -o assp/freqconv.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/mhs.c -o assp/mhs.o assp/mhs.c: In function ‘computeMHS’: assp/mhs.c:448:12: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 448 | int FILE_IN, FILE_OUT, CREATED, VOICED; | ^~~~~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/smp2dur.c -o assp/smp2dur.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspana.c -o assp/asspana.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/diff.c -o assp/diff.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/headers.c -o assp/headers.o assp/headers.c: In function ‘getAIFhdr’: assp/headers.c:882:12: warning: variable ‘blockSize’ set but not used [-Wunused-but-set-variable] 882 | uint32_t blockSize; | ^~~~~~~~~ assp/headers.c: In function ‘getCSLhdr’: assp/headers.c:1231:12: warning: variable ‘peakMag’ set but not used [-Wunused-but-set-variable] 1231 | int16_t peakMag; | ^~~~~~~ assp/headers.c: In function ‘getWAVhdr’: assp/headers.c:1828:22: warning: variable ‘lspPosMask’ set but not used [-Wunused-but-set-variable] 1828 | uint32_t byteRate, lspPosMask; | ^~~~~~~~~~ assp/headers.c:1828:12: warning: variable ‘byteRate’ set but not used [-Wunused-but-set-variable] 1828 | uint32_t byteRate, lspPosMask; | ^~~~~~~~ assp/headers.c: In function ‘putSSFFhdr’: assp/headers.c:2824:7: warning: unused variable ‘prev_header_length’ [-Wunused-variable] 2824 | int prev_header_length = strlen(header); | ^~~~~~~~~~~~~~~~~~ assp/headers.c: At top level: assp/headers.c:875:11: warning: ‘getAIFhdr’ defined but not used [-Wunused-function] 875 | LOCAL int getAIFhdr(DOBJ *dop) | ^~~~~~~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/miscstring.c -o assp/miscstring.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/spectra.c -o assp/spectra.o assp/spectra.c: In function ‘freeSPECT_GD’: assp/spectra.c:734:13: warning: unused variable ‘gd’ [-Wunused-variable] 734 | SPECT_GD *gd; | ^~ assp/spectra.c: In function ‘getCepstrum’: assp/spectra.c:932:23: warning: unused variable ‘M’ [-Wunused-variable] 932 | register long n, N, M, L; | ^ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspfio.c -o assp/asspfio.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/dsputils.c -o assp/dsputils.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/isgerman.c -o assp/isgerman.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrand.c -o assp/myrand.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/statistics.c -o assp/statistics.o assp/statistics.c: In function ‘statPrintHist’: assp/statistics.c:478:10: warning: unused variable ‘centre’ [-Wunused-variable] 478 | double centre; | ^~~~~~ assp/statistics.c:477:10: warning: unused variable ‘i’ [-Wunused-variable] 477 | size_t i; | ^ assp/statistics.c:476:14: warning: unused variable ‘nd1’ [-Wunused-variable] 476 | int nd, nd1; | ^~~ assp/statistics.c:476:10: warning: unused variable ‘nd’ [-Wunused-variable] 476 | int nd, nd1; | ^~ assp/statistics.c:475:10: warning: unused variable ‘format’ [-Wunused-variable] 475 | char format[32]; | ^~~~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/asspmess.c -o assp/asspmess.o assp/asspmess.c: In function ‘prtAsspMsg’: assp/asspmess.c:169:9: warning: unused variable ‘funcVal’ [-Wunused-variable] 169 | int funcVal; | ^~~~~~~ assp/asspmess.c:168:20: warning: unused variable ‘indent’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~~~~ assp/asspmess.c:168:15: warning: unused variable ‘bug’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ assp/asspmess.c:168:9: warning: unused variable ‘msg’ [-Wunused-variable] 168 | char *msg, *bug, indent[16]; | ^~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fft.c -o assp/fft.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/ksv.c -o assp/ksv.o assp/ksv.c: In function ‘computeKSV’: assp/ksv.c:503:20: warning: unused variable ‘n’ [-Wunused-variable] 503 | int err, nd, n, type; | ^ assp/ksv.c:503:16: warning: unused variable ‘nd’ [-Wunused-variable] 503 | int err, nd, n, type; | ^~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/myrint.c -o assp/myrint.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/trace.c -o assp/trace.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/aucheck.c -o assp/aucheck.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fgetl.c -o assp/fgetl.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/labelobj.c -o assp/labelobj.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/numdecim.c -o assp/numdecim.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/winfuncs.c -o assp/winfuncs.o assp/winfuncs.c: In function ‘listWFs’: assp/winfuncs.c:1139:11: warning: unused variable ‘specs’ [-Wunused-variable] 1139 | WFDATA *specs; | ^~~~~ assp/winfuncs.c:1138:11: warning: unused variable ‘wPtr’ [-Wunused-variable] 1138 | WFLIST *wPtr; | ^~~~ assp/winfuncs.c:1137:14: warning: unused variable ‘m’ [-Wunused-variable] 1137 | int l, m; | ^ assp/winfuncs.c:1137:11: warning: unused variable ‘l’ [-Wunused-variable] 1137 | int l, m; | ^ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/auconv.c -o assp/auconv.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filter.c -o assp/filter.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/lpc.c -o assp/lpc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/parsepath.c -o assp/parsepath.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/zcr.c -o assp/zcr.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/bitarray.c -o assp/bitarray.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/filters.c -o assp/filters.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/math.c -o assp/math.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rfc.c -o assp/rfc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/chain.c -o assp/chain.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/fmt.c -o assp/fmt.o assp/fmt.c:1795:11: warning: ‘printRaw’ defined but not used [-Wunused-function] 1795 | LOCAL int printRaw(FMTDATA *fPtr, long frameNr, int numFMT, DOBJ *dop) | ^~~~~~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/memswab.c -o assp/memswab.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c assp/rms.c -o assp/rms.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dataobj.c -o dataobj.o dataobj.c: In function ‘dobj2AsspDataObj’: dataobj.c:170:21: warning: unused variable ‘genVar’ [-Wunused-variable] 170 | TSSFF_Generic *genVar = NULL; | ^~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:405:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 405 | int8_t *i8Ptr; | ^~~~~ dataobj.c:397:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 397 | int i, | ^ dataobj.c: In function ‘sexp2dobj’: dataobj.c:608:21: warning: unused variable ‘varNames’ [-Wunused-variable] 608 | varNames; | ^~~~~~~~ dataobj.c:602:21: warning: unused variable ‘numFields’ [-Wunused-variable] 602 | size_t numFields = -1; | ^~~~~~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:894:21: warning: variable ‘i8Ptr’ set but not used [-Wunused-but-set-variable] 894 | int8_t *i8Ptr; | ^~~~~ dataobj.c:886:21: warning: variable ‘i’ set but not used [-Wunused-but-set-variable] 886 | int i, | ^ dataobj.c: At top level: dataobj.c:142:1: warning: ‘DObjFinalizer’ defined but not used [-Wunused-function] 142 | DObjFinalizer(SEXP dPtr) | ^~~~~~~~~~~~~ dataobj.c: In function ‘getDObjTrackData’: dataobj.c:413:21: warning: ‘Rans’ may be used uninitialized [-Wmaybe-uninitialized] 413 | double *Rans; | ^~~~ dataobj.c:414:21: warning: ‘Ians’ may be used uninitialized [-Wmaybe-uninitialized] 414 | int *Ians; | ^~~~ dataobj.c:404:21: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 404 | uint8_t *u8Ptr; | ^~~~~ dataobj.c: In function ‘addTrackData’: dataobj.c:933:30: warning: ‘u8Ptr’ may be used uninitialized [-Wmaybe-uninitialized] 933 | u8Ptr[n] = (int8_t) numPtr[m + n * dop->numRecords]; | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ dataobj.c:893:21: note: ‘u8Ptr’ was declared here 893 | uint8_t *u8Ptr; | ^~~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c performAssp.c -o performAssp.o performAssp.c: In function ‘computeFilter’: performAssp.c:1231:21: warning: variable ‘FILE_IN’ set but not used [-Wunused-but-set-variable] 1231 | int FILE_IN, | ^~~~~~~ In file included from wrassp.h:5, from performAssp.c:1: performAssp.c: In function ‘performAssp’: /home/hornik/tmp/R-d-gcc-14/include/Rinternals.h:934:33: warning: ‘utilsPackage’ may be used uninitialized [-Wmaybe-uninitialized] 934 | #define eval Rf_eval performAssp.c:1188:13: note: in expansion of macro ‘eval’ 1188 | eval(R_fcall3, utilsPackage); | ^~~~ performAssp.c:490:9: note: ‘utilsPackage’ was declared here 490 | utilsPackage, /* to update the prograssbar */ | ^~~~~~~~~~~~ performAssp.c:1187:28: warning: ‘newVal’ may be used uninitialized [-Wmaybe-uninitialized] 1187 | INTEGER(newVal)[0] = i + 1; | ^ performAssp.c:491:9: note: ‘newVal’ was declared here 491 | newVal, | ^~~~~~ performAssp.c:1217:12: warning: ‘res’ may be used uninitialized [-Wmaybe-uninitialized] 1217 | return res; | ^~~ performAssp.c:488:21: note: ‘res’ was declared here 488 | res, | ^~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c types.c -o types.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I assp -DWRASSP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c wrassp_init.c -o wrassp_init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o wrassp.so assp/acf.o assp/dataobj.o assp/freqconv.o assp/mhs.o assp/smp2dur.o assp/asspana.o assp/diff.o assp/headers.o assp/miscstring.o assp/spectra.o assp/asspfio.o assp/dsputils.o assp/isgerman.o assp/myrand.o assp/statistics.o assp/asspmess.o assp/fft.o assp/ksv.o assp/myrint.o assp/trace.o assp/aucheck.o assp/fgetl.o assp/labelobj.o assp/numdecim.o assp/winfuncs.o assp/auconv.o assp/filter.o assp/lpc.o assp/parsepath.o assp/zcr.o assp/bitarray.o assp/filters.o assp/math.o assp/rfc.o assp/chain.o assp/fmt.o assp/memswab.o assp/rms.o dataobj.o performAssp.o types.o wrassp_init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpolSKOm/R.INSTALL103e396a4e33f4/wrassp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-wrassp/00new/wrassp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (wrassp) * installing *source* package ‘rtdists’ ... ** this is package ‘rtdists’ version ‘0.11-5’ ** package ‘rtdists’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpscVFYs/R.INSTALL104270cd805f2/rtdists/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RFastDM.cpp -o RFastDM.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o rtdists.so RFastDM.o RcppExports.o init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpscVFYs/R.INSTALL104270cd805f2/rtdists/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-rtdists/00new/rtdists/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rtdists) * installing *source* package ‘chipPCR’ ... ** this is package ‘chipPCR’ version ‘1.0-2’ ** package ‘chipPCR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘qqline’ from package ‘stats’ in package ‘chipPCR’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (chipPCR) begin installing package ‘MBmca’ * installing *source* package ‘AdhereR’ ... ** this is package ‘AdhereR’ version ‘0.8.1’ ** package ‘AdhereR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AdhereR) * installing *source* package ‘interleave’ ... ** this is package ‘interleave’ version ‘0.1.2’ ** package ‘interleave’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpw7MgmJ/R.INSTALL103e1d332569f4/interleave/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -fpic -g -O2 -Wall -pedantic -mtune=native -c interleave.cpp -o interleave.o In file included from interleave.cpp:2: ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:246:9: warning: ‘n_input_coordinates’ may be used uninitialized [-Wmaybe-uninitialized] 246 | if( Rf_length( p ) != n_input_coordinates ) { | ^~ ../inst/include/interleave/primitives/primitives.hpp:149:14: note: ‘n_input_coordinates’ was declared here 149 | R_xlen_t n_input_coordinates; | ^~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:189, from ../inst/include/interleave/earcut/interleave.hpp:4, from interleave.cpp:1: In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]’, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:465:46, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:489:40, inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter::get(const T&) [with T = int; int RTYPE = 19]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:532:13, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:525:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:514:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&) [with T = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1164:32, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1148:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1131:33, inlined from ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’ at ../inst/include/interleave/primitives/primitives.hpp:286:30: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: ‘stride’ may be used uninitialized [-Wmaybe-uninitialized] 442 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:158:9: note: ‘stride’ was declared here 158 | int stride; | ^~~~~~ g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -fpic -g -O2 -Wall -pedantic -mtune=native -c tests.cpp -o tests.o In file included from tests.cpp:5: ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:246:9: warning: ‘n_input_coordinates’ may be used uninitialized [-Wmaybe-uninitialized] 246 | if( Rf_length( p ) != n_input_coordinates ) { | ^~ ../inst/include/interleave/primitives/primitives.hpp:149:14: note: ‘n_input_coordinates’ was declared here 149 | R_xlen_t n_input_coordinates; | ^~~~~~~~~~~~~~~~~~~ In file included from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:189, from /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27, from tests.cpp:1: In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]’, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:465:46, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:489:40, inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter::get(const T&) [with T = int; int RTYPE = 19]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:532:13, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:525:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:514:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&) [with T = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1164:32, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1148:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1131:33, inlined from ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’ at ../inst/include/interleave/primitives/primitives.hpp:286:30: /home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: ‘stride’ may be used uninitialized [-Wmaybe-uninitialized] 442 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ ../inst/include/interleave/primitives/primitives.hpp: In function ‘SEXPREC* interleave::primitives::interleave_triangle(SEXPREC*&, Rcpp::List)’: ../inst/include/interleave/primitives/primitives.hpp:158:9: note: ‘stride’ was declared here 158 | int stride; | ^~~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o interleave.so RcppExports.o interleave.o tests.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpw7MgmJ/R.INSTALL103e1d332569f4/interleave/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-interleave/00new/interleave/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (interleave) * installing *source* package ‘spTimer’ ... ** this is package ‘spTimer’ version ‘3.3.3’ ** package ‘spTimer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLvSzmy/R.INSTALL10443e773fb576/spTimer/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c common.c -o common.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c covariance.c -o covariance.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation_xb_ar.c -o equation_xb_ar.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation_xb_gp.c -o equation_xb_gp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c equation_xb_gpp.c -o equation_xb_gpp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c forecast_xb_ar.c -o forecast_xb_ar.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c forecast_xb_gp.c -o forecast_xb_gp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c forecast_xb_gpp.c -o forecast_xb_gpp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gibbs_ar.c -o gibbs_ar.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gibbs_gp.c -o gibbs_gp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gibbs_gpp.c -o gibbs_gpp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mathematics.c -o mathematics.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prediction_xb_ar.c -o prediction_xb_ar.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prediction_xb_gp.c -o prediction_xb_gp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c prediction_xb_gpp.c -o prediction_xb_gpp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c randgenerator.c -o randgenerator.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c spTimer_init.c -o spTimer_init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o spTimer.so common.o covariance.o equation_xb_ar.o equation_xb_gp.o equation_xb_gpp.o forecast_xb_ar.o forecast_xb_gp.o forecast_xb_gpp.o gibbs_ar.o gibbs_gp.o gibbs_gpp.o mathematics.o prediction_xb_ar.o prediction_xb_gp.o prediction_xb_gpp.o randgenerator.o spTimer_init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLvSzmy/R.INSTALL10443e773fb576/spTimer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spTimer/00new/spTimer/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spTimer) * installing *source* package ‘V8’ ... ** this is package ‘V8’ version ‘6.0.4’ ** using staged installation Found C++20 compiler: g++-14 Using CXXCPP=g++-14 -std=gnu++20 -E Using PKG_CFLAGS=-I/usr/include/v8 Using PKG_LIBS=-lv8 -lv8_libplatform Running feature test for pointer compression... Pointer compression not needed ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++20 make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpf8DooJ/R.INSTALL1047556657a79c/V8/src' g++-14 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/v8 -DV8_ENABLE_CHECKS -DISNODEJS=11.3.244.8-node.26 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/include/v8 -DV8_ENABLE_CHECKS -DISNODEJS=11.3.244.8-node.26 -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O2 -Wall -pedantic -mtune=native -c bindings.cpp -o bindings.o g++-14 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o V8.so RcppExports.o bindings.o -lv8 -lv8_libplatform -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpf8DooJ/R.INSTALL1047556657a79c/V8/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-V8/00new/V8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (V8) begin installing package ‘nodbi’ begin installing package ‘js’ * installing *source* package ‘predicts’ ... ** this is package ‘predicts’ version ‘0.1-19’ ** package ‘predicts’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (predicts) * installing *source* package ‘RDML’ ... ** this is package ‘RDML’ version ‘1.0’ ** package ‘RDML’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RDML) begin installing package ‘shinyMolBio’ * installing *source* package ‘Sim.DiffProc’ ... ** this is package ‘Sim.DiffProc’ version ‘4.9’ ** package ‘Sim.DiffProc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFNT8tU/R.INSTALL1046453e9eae89/Sim.DiffProc/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Sim.DiffProc.c -o Sim.DiffProc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o Sim.DiffProc.so Sim.DiffProc.o init.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFNT8tU/R.INSTALL1046453e9eae89/Sim.DiffProc/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Sim.DiffProc/00new/Sim.DiffProc/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Sim.DiffProc) * installing *source* package ‘js’ ... ** this is package ‘js’ version ‘1.2.1’ ** package ‘js’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (js) * installing *source* package ‘MBmca’ ... ** this is package ‘MBmca’ version ‘1.0.1-3’ ** package ‘MBmca’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MBmca) * installing *source* package ‘nodbi’ ... ** this is package ‘nodbi’ version ‘0.13.0’ ** package ‘nodbi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nodbi) * installing *source* package ‘shinyMolBio’ ... ** this is package ‘shinyMolBio’ version ‘0.2’ ** package ‘shinyMolBio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyMolBio) * installing *source* package ‘inldata’ ... ** this is package ‘inldata’ version ‘1.2.7’ ** package ‘inldata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (inldata) * installing *source* package ‘colourvalues’ ... ** this is package ‘colourvalues’ version ‘0.3.9’ ** package ‘colourvalues’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++17 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkB6Srw/R.INSTALL103ded1615167d/colourvalues/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ColourValues.cpp -o ColourValues.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ConvertColours.cpp -o ConvertColours.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c alpha.cpp -o alpha.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c format.cpp -o format.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c list.cpp -o list.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c palette_utils.cpp -o palette_utils.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c palettes.cpp -o palettes.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I../inst/include -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c scale.cpp -o scale.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o colourvalues.so ColourValues.o ConvertColours.o RcppExports.o alpha.o format.o list.o palette_utils.o palettes.o scale.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkB6Srw/R.INSTALL103ded1615167d/colourvalues/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-colourvalues/00new/colourvalues/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (colourvalues) begin installing package ‘spatialwidget’ * installing *source* package ‘bioacoustics’ ... ** this is package ‘bioacoustics’ version ‘0.2.8’ ** package ‘bioacoustics’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 -std=gnu23 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc-14 -std=gnu23 accepts -g... yes checking for gcc-14 -std=gnu23 option to accept ISO C89... none needed checking whether we are using the GNU C++ compiler... yes checking whether g++-14 -std=gnu++17 accepts -g... yes configure: CXX: g++-14 -std=gnu++17 checking for cmake... cmake checking for g++-14 -std=gnu++17 option to support OpenMP... -fopenmp checking for gcc-14 -std=gnu23 option to support OpenMP... -fopenmp checking how to run the C preprocessor... gcc-14 -std=gnu23 -E checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking fftw3.h usability... yes checking fftw3.h presence... yes checking for fftw3.h... yes checking for library containing fftw_plan_r2r_1d... -lfftw3 configure: Suitable fftw3 library found. configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMz9j0L/R.INSTALL10452029ef03c8/bioacoustics/src' g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bat_bioacoustics.cpp -o bat_bioacoustics.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bat_classify.cpp -o bat_classify.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_analyse.cpp -o bb_analyse.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_detect.cpp -o bb_detect.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bb_extract.cpp -o bb_extract.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_blob_finder.cpp -o bc_blob_finder.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_features.cpp -o bc_features.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c bc_img_processing.cpp -o bc_img_processing.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c fft.cpp -o fft.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c read_wac.cpp -o read_wac.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O2 -Wall -pedantic -mtune=native -std=gnu++11 -fpic -g -O2 -Wall -pedantic -mtune=native -c spectro.cpp -o spectro.o g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o bioacoustics.so RcppExports.o bat_bioacoustics.o bat_classify.o bb_analyse.o bb_detect.o bb_extract.o bc_blob_finder.o bc_features.o bc_img_processing.o fft.o read_wac.o spectro.o -lfftw3 -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMz9j0L/R.INSTALL10452029ef03c8/bioacoustics/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bioacoustics/00new/bioacoustics/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bioacoustics) * installing *source* package ‘nonlinearTseries’ ... ** this is package ‘nonlinearTseries’ version ‘0.3.1’ ** package ‘nonlinearTseries’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqFhxrO/R.INSTALL103e264e781425/nonlinearTseries/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ANN.cpp -o ANN.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c DFA.cpp -o DFA.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c NN.cpp -o NN.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bd_fix_rad_search.cpp -o bd_fix_rad_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bd_pr_search.cpp -o bd_pr_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bd_search.cpp -o bd_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c bd_tree.cpp -o bd_tree.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c brute.cpp -o brute.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c corr_dim.cpp -o corr_dim.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c generic_functions.cpp -o generic_functions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c information_dimension.cpp -o information_dimension.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_dump.cpp -o kd_dump.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_fix_rad_search.cpp -o kd_fix_rad_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_pr_search.cpp -o kd_pr_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_search.cpp -o kd_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_split.cpp -o kd_split.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_tree.cpp -o kd_tree.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kd_util.cpp -o kd_util.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lyapunov_exponent.cpp -o lyapunov_exponent.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c mutual_information.cpp -o mutual_information.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c neighbour_search.cpp -o neighbour_search.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c neighbour_search_wrapper.cpp -o neighbour_search_wrapper.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c nonlinear_noise_reduction.cpp -o nonlinear_noise_reduction.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c poincare_map.cpp -o poincare_map.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rqa.cpp -o rqa.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c space_time_plot.cpp -o space_time_plot.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I. -IANN -DRANN -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o nonlinearTseries.so ANN.o DFA.o NN.o RcppExports.o bd_fix_rad_search.o bd_pr_search.o bd_search.o bd_tree.o brute.o corr_dim.o generic_functions.o information_dimension.o kd_dump.o kd_fix_rad_search.o kd_pr_search.o kd_search.o kd_split.o kd_tree.o kd_util.o lyapunov_exponent.o mutual_information.o neighbour_search.o neighbour_search_wrapper.o nonlinear_noise_reduction.o poincare_map.o rqa.o space_time_plot.o utils.o -llapack -L/home/hornik/tmp/R-d-gcc-14/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqFhxrO/R.INSTALL103e264e781425/nonlinearTseries/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-nonlinearTseries/00new/nonlinearTseries/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nonlinearTseries) begin installing package ‘soundgen’ * installing *source* package ‘soundgen’ ... ** this is package ‘soundgen’ version ‘2.7.2’ ** package ‘soundgen’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (soundgen) * installing *source* package ‘spatialwidget’ ... ** this is package ‘spatialwidget’ version ‘0.2.5’ ** package ‘spatialwidget’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++14 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkauKz8/R.INSTALL1052bb3a092e23/spatialwidget/src' g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c colour.cpp -o colour.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c data_construction.cpp -o data_construction.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c geojson.cpp -o geojson.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c geometrycollection.cpp -o geometrycollection.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c legends.cpp -o legends.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c mesh.cpp -o mesh.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c palette.cpp -o palette.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c parameters.cpp -o parameters.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c spatialwidget_defaults.cpp -o spatialwidget_defaults.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c utils.cpp -o utils.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c widget_line.cpp -o widget_line.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c widget_point.cpp -o widget_point.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c widget_polygon.cpp -o widget_polygon.o g++-14 -std=gnu++14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o spatialwidget.so RcppExports.o colour.o data_construction.o geojson.o geometrycollection.o legends.o mesh.o palette.o parameters.o spatialwidget_defaults.o utils.o widget_line.o widget_point.o widget_polygon.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkauKz8/R.INSTALL1052bb3a092e23/spatialwidget/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spatialwidget/00new/spatialwidget/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spatialwidget) begin installing package ‘mapdeck’ * installing *source* package ‘mapdeck’ ... ** this is package ‘mapdeck’ version ‘0.3.5’ ** package ‘mapdeck’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ using C++14 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiA3q11/R.INSTALL1055c01a82c39a/mapdeck/src' g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c aggregate.cpp -o aggregate.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c geojson.cpp -o geojson.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c mesh.cpp -o mesh.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c od.cpp -o od.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c path.cpp -o path.o path.cpp: In function ‘SEXPREC* rcpp_path_interleaved(Rcpp::DataFrame, Rcpp::List, Rcpp::IntegerVector, int, std::string)’: path.cpp:102:13: warning: unused variable ‘n_coordinates’ [-Wunused-variable] 102 | int n_coordinates = coordinates.length(); | ^~~~~~~~~~~~~ g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c point.cpp -o point.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c polygon.cpp -o polygon.o g++-14 -std=gnu++14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/BH/include' -I'/home/hornik/tmp/CRAN_recheck/Library/colourvalues/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geojsonsf/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/geometries/include' -I'/home/hornik/tmp/CRAN_recheck/Library/interleave/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/jsonify/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/rapidjsonr/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/sfheaders/include' -I'/home/hornik/tmp/CRAN_recheck/Library/spatialwidget/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O2 -Wall -pedantic -mtune=native -c text.cpp -o text.o g++-14 -std=gnu++14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o mapdeck.so RcppExports.o aggregate.o geojson.o mesh.o od.o path.o point.o polygon.o text.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiA3q11/R.INSTALL1055c01a82c39a/mapdeck/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mapdeck/00new/mapdeck/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mapdeck) checking V8_6.0.4.tar.gz ... checking adepro_4.2.7.tar.gz ... checking ajv_1.0.0.tar.gz ... checking AdhereRViz_0.2.1.tar.gz ... checking almanac_1.0.0.tar.gz ... checking asciicast_2.3.1.tar.gz ... checking audubon_0.5.2.tar.gz ... checking badgen_1.0.1.tar.gz ... checking colormap_0.1.4.tar.gz ... checking concaveman_1.1.0.tar.gz ... checking cppcheckR_1.0.0.tar.gz ... checking covatest_1.2.4.tar.gz ... checking ctrdata_1.22.2.tar.gz ... checking daff_1.1.1.tar.gz ... checking DiagrammeRsvg_0.1.tar.gz ... checking dagitty_0.3-4.tar.gz ... checking DOT_0.1.tar.gz ... checking dtrackr_0.4.6.tar.gz ... checking emuR_2.5.0.tar.gz ... checking geojsonio_0.11.3.tar.gz ... checking gfer_0.1.12.tar.gz ... checking h3jsr_1.3.1.tar.gz ... checking ical_0.1.6.tar.gz ... checking js_1.2.1.tar.gz ... checking JSconsole_0.1.0.tar.gz ... checking jsonld_2.2.1.tar.gz ... checking jsonNormalize_1.0.0.tar.gz ... checking jsonvalidate_1.5.0.tar.gz ... checking matRiks_0.1.3.tar.gz ... checking sketch_1.1.20.3.tar.gz ... checking mousetRajectory_0.2.1.tar.gz ... checking animate_0.3.9.4.tar.gz ... checking rless_0.1.1.tar.gz ... checking mlms_1.0.2.tar.gz ... checking inldata_1.2.7.tar.gz ... checking ASRgenomics_1.1.4.tar.gz ... checking nomnoml_0.3.0.tar.gz ... checking rmapshaper_0.5.0.tar.gz ... checking openrouteservice_0.6.2.tar.gz ... checking usincometaxes_0.7.1.tar.gz ... checking leaflet.providers_2.0.0.tar.gz ... checking tweetcheck_0.1.0.tar.gz ... checking randomcoloR_1.1.0.1.tar.gz ... checking rjade_0.1.1.tar.gz ... checking RelDists_1.0.0.tar.gz ... checking altair_4.2.3.tar.gz ... checking nodbi_0.13.0.tar.gz ... checking SpatMCA_1.0.4.tar.gz ... checking rstanarm_2.32.1.tar.gz ... checking juicyjuice_0.1.0.tar.gz ... checking emhawkes_0.9.7.tar.gz ... checking EstimationTools_4.0.0.tar.gz ... checking katex_1.5.0.tar.gz ... checking shortIRT_0.1.3.tar.gz ... checking rgl2gltf_1.0.7.tar.gz ... checking reactR_0.6.1.tar.gz ... checking prettifyAddins_2.6.1.tar.gz ... checking reactable_0.4.4.tar.gz ... checking nscancor_0.7.0-6.tar.gz ... checking trackeRapp_1.2.tar.gz ... checking glmm_1.4.5.tar.gz ... checking rgl_1.3.18.tar.gz ... checking uaparserjs_0.3.5.tar.gz ... checking phyloregion_1.0.8.tar.gz ... checking pmwg_0.2.7.tar.gz ... checking sim2Dpredictr_0.1.1.tar.gz ... checking shinyChakraUI_1.1.1.tar.gz ... checking prismjs_2.1.0.tar.gz ... checking bracer_1.2.2.tar.gz ... checking RDML_1.0.tar.gz ... checking TDCM_0.1.0.tar.gz ... checking rstan_2.32.7.tar.gz ... checking causalOT_1.0.2.tar.gz ... checking SpatPCA_1.3.5.tar.gz ... checking warbleR_1.1.34.tar.gz ... checking vegawidget_0.5.0.tar.gz ... checking TempStable_0.2.2.tar.gz ... Depends: Package: V8 Imports: Rcpp (>= 0.12.12), jsonlite (>= 1.0), curl (>= 1.0), utils LinkingTo: Rcpp Timings: user system elapsed V8 56.25 6.467 65.386 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 15 61 Check results summary: V8 ... OK rdepends_adepro ... OK rdepends_AdhereRViz ... OK rdepends_ajv ... OK rdepends_almanac ... OK rdepends_altair ... OK rdepends_animate ... NOTE * checking DESCRIPTION meta-information ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_asciicast ... OK rdepends_ASRgenomics ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_audubon ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_badgen ... OK rdepends_bracer ... OK rdepends_causalOT ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_colormap ... OK rdepends_concaveman ... OK rdepends_covatest ... OK rdepends_cppcheckR ... OK rdepends_ctrdata ... OK rdepends_daff ... OK rdepends_dagitty ... OK rdepends_DiagrammeRsvg ... OK rdepends_DOT ... NOTE * checking for non-standard things in the check directory ... NOTE rdepends_dtrackr ... OK rdepends_emhawkes ... NOTE * checking Rd cross-references ... NOTE rdepends_emuR ... NOTE * checking Rd cross-references ... NOTE rdepends_EstimationTools ... NOTE * checking Rd files ... [2s/2s] NOTE * checking Rd cross-references ... NOTE rdepends_geojsonio ... OK rdepends_gfer ... OK rdepends_glmm ... OK rdepends_h3jsr ... OK rdepends_ical ... OK rdepends_inldata ... OK rdepends_js ... OK rdepends_JSconsole ... OK rdepends_jsonld ... OK rdepends_jsonNormalize ... OK rdepends_jsonvalidate ... OK rdepends_juicyjuice ... OK rdepends_katex ... OK rdepends_leaflet.providers ... OK rdepends_matRiks ... OK rdepends_mlms ... OK rdepends_mousetRajectory ... OK rdepends_nodbi ... OK rdepends_nomnoml ... OK rdepends_nscancor ... OK rdepends_openrouteservice ... OK rdepends_phyloregion ... NOTE * checking Rd files ... [0s/0s] NOTE * checking Rd cross-references ... NOTE rdepends_pmwg ... OK rdepends_prettifyAddins ... OK rdepends_prismjs ... OK rdepends_randomcoloR ... OK rdepends_RDML ... NOTE * checking Rd cross-references ... NOTE rdepends_reactable ... OK rdepends_reactR ... OK rdepends_RelDists ... OK rdepends_rgl ... OK rdepends_rgl2gltf ... OK rdepends_rjade ... OK rdepends_rless ... OK rdepends_rmapshaper ... NOTE * checking Rd files ... [0s/0s] NOTE rdepends_rstan ... OK rdepends_rstanarm ... NOTE * checking Rd cross-references ... NOTE rdepends_shinyChakraUI ... OK rdepends_shortIRT ... OK rdepends_sim2Dpredictr ... NOTE * checking Rd files ... [1s/1s] NOTE rdepends_sketch ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_SpatMCA ... OK rdepends_SpatPCA ... OK rdepends_TDCM ... OK rdepends_TempStable ... OK rdepends_trackeRapp ... OK rdepends_tweetcheck ... OK rdepends_uaparserjs ... NOTE * checking package subdirectories ... NOTE rdepends_usincometaxes ... OK rdepends_vegawidget ... OK rdepends_warbleR ... OK Check results changes: Package: AdhereRViz Check: CRAN incoming feasibility Old result: NOTE Package: causalOT Check: CRAN incoming feasibility Old result: NOTE Package: dagitty Check: CRAN incoming feasibility Old result: NOTE Package: DOT Check: CRAN incoming feasibility Old result: NOTE Package: inldata Check: tests Old result: ERROR New result: OK Package: JSconsole Check: CRAN incoming feasibility Old result: NOTE Package: matRiks Check: CRAN incoming feasibility Old result: NOTE Package: randomcoloR Check: CRAN incoming feasibility Old result: NOTE Package: RDML Check: CRAN incoming feasibility Old result: NOTE Package: rjade Check: CRAN incoming feasibility Old result: NOTE Package: shortIRT Check: CRAN incoming feasibility Old result: NOTE Package: sim2Dpredictr Check: CRAN incoming feasibility Old result: NOTE Package: sketch Check: CRAN incoming feasibility Old result: NOTE Package: TempStable Check: CRAN incoming feasibility Old result: NOTE