R Under development (unstable) (2024-09-08 r87106 ucrt) -- "Unsuffered Consequences"
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> library(testthat)
> library(TrialEmulation)
> 
> data.table::setDTthreads(2)
> test_check("TrialEmulation")
Starting data manipulation
Starting data extension
Summary of extended data:
Number of observations: 1939053
------------------------------------------------------------

Starting data manipulation
P(treatment = 1 | previous treatment = 0) for denominator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept) -3.84325    0.04785  -80.31   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 4329.7  on 21263  degrees of freedom
Residual deviance: 4329.7  on 21263  degrees of freedom
AIC: 4331.7

Number of Fisher Scoring iterations: 6

P(treatment = 1 | previous treatment = 0) for numerator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept) -3.84325    0.04785  -80.31   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 4329.7  on 21263  degrees of freedom
Residual deviance: 4329.7  on 21263  degrees of freedom
AIC: 4331.7

Number of Fisher Scoring iterations: 6

P(treatment = 1 | previous treatment = 1) for denominator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept)  4.37616    0.06815   64.21   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 2346.7  on 17555  degrees of freedom
Residual deviance: 2346.7  on 17555  degrees of freedom
AIC: 2348.7

Number of Fisher Scoring iterations: 7

P(treatment = 1 | previous treatment = 1) for numerator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept)  4.37616    0.06815   64.21   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 2346.7  on 17555  degrees of freedom
Residual deviance: 2346.7  on 17555  degrees of freedom
AIC: 2348.7

Number of Fisher Scoring iterations: 7

Starting data extension
Summary of extended data:
Number of observations: 963883
------------------------------------------------------------

Starting data manipulation
P(treatment = 1 | previous treatment = 0) for denominator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept) -3.32517    0.03599   -92.4   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 6948.7  on 23042  degrees of freedom
Residual deviance: 6948.7  on 23042  degrees of freedom
AIC: 6950.7

Number of Fisher Scoring iterations: 6

P(treatment = 1 | previous treatment = 0) for numerator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept) -3.32517    0.03599   -92.4   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 6948.7  on 23042  degrees of freedom
Residual deviance: 6948.7  on 23042  degrees of freedom
AIC: 6950.7

Number of Fisher Scoring iterations: 6

P(treatment = 1 | previous treatment = 1) for denominator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept)   3.9124     0.0453   86.37   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 4892.8  on 25356  degrees of freedom
Residual deviance: 4892.8  on 25356  degrees of freedom
AIC: 4894.8

Number of Fisher Scoring iterations: 6

P(treatment = 1 | previous treatment = 1) for numerator

Call:
glm(formula = treatment ~ 1, family = binomial(link = "logit"), 
    data = data)

Coefficients:
            Estimate Std. Error z value Pr(>|z|)    
(Intercept)   3.9124     0.0453   86.37   <2e-16 ***
---
Signif. codes:  0 '***' 0.001 '**' 0.01 '*' 0.05 '.' 0.1 ' ' 1

(Dispersion parameter for binomial family taken to be 1)

    Null deviance: 4892.8  on 25356  degrees of freedom
Residual deviance: 4892.8  on 25356  degrees of freedom
AIC: 4894.8

Number of Fisher Scoring iterations: 6

Starting data extension
Summary of extended data:
Number of observations: 1939053
------------------------------------------------------------

[ FAIL 0 | WARN 0 | SKIP 25 | PASS 139 ]

══ Skipped tests (25) ══════════════════════════════════════════════════════════
• On CRAN (25): 'test-data_utils.R:6:3', 'test-data_utils.R:111:3',
  'test-data_utils.R:131:3', 'test-generics.R:25:3', 'test-generics.R:66:3',
  'test-generics.R:95:3', 'test-modelling.R:99:3', 'test-modelling.R:154:3',
  'test-modelling.R:175:3', 'test-modelling.R:205:3', 'test-modelling.R:229:3',
  'test-modelling.R:266:3', 'test-modelling.R:290:3', 'test-modelling.R:314:3',
  'test-modelling.R:357:3', 'test-predict.R:26:3', 'test-predict.R:51:3',
  'test-predict.R:108:3', 'test-sampling.R:5:3', 'test-sampling.R:15:3',
  'test-sampling.R:34:3', 'test-sampling.R:54:3', 'test-sampling.R:86:3',
  'test-sampling.R:103:3', 'test-sampling.R:180:3'

[ FAIL 0 | WARN 0 | SKIP 25 | PASS 139 ]
> 
> proc.time()
   user  system elapsed 
 118.67   28.65  136.60