Package check result: OK

Changes to worse in reverse depends:

Package: Rogue
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘Bayesian.Rmd’ using rmarkdown
  
  Quitting from Bayesian.Rmd:182-187 [rogue-plot-trees]
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  <error/rlang_error>
  Error in `treeEdge[[1]]`:
  ! subscript out of bounds
  ---
  Backtrace:
      ▆
   1. └─TreeTools::RoguePlot(...)
   2.   └─base::lapply(lapply(noRogue, DropTip, tip), AddTip, 0, dummyRoot)
   3.     └─TreeTools (local) FUN(X[[i]], ...)
   4.       └─base::rbind(...)
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  
  Error: processing vignette 'Bayesian.Rmd' failed with diagnostics:
  subscript out of bounds
  --- failed re-building ‘Bayesian.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘Bayesian.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: TreeSearch
Check: tests
New result: ERROR
    Running ‘spelling.R’ [0s/0s]
    Running ‘testthat.R’ [32s/32s]
  Running the tests in ‘tests/testthat.R’ failed.
  Complete output:
    > library("testthat")
    > library("TreeSearch")
    > 
    > test_check("TreeSearch")
    Saving _problems/test-MaximizeParsimony-89.R
    1 + 0 != 10
    [ FAIL 1 | WARN 1 | SKIP 4 | PASS 7351 ]
    
    ══ Skipped tests (4) ═══════════════════════════════════════════════════════════
    • On CRAN (4): 'test-Jackknife.R:27:1', 'test-PlotCharacter.R:1:1',
      'test-PlotCharacter.R:141:1', 'test-PlotCharacter.R:151:1'
    
    ══ Failed tests ════════════════════════════════════════════════════════════════
    ── Error ('test-MaximizeParsimony.R:87:3'): Seed trees retained ────────────────
    Error in `rep(names(firstHit), firstHit)`: invalid 'times' argument
    Backtrace:
        ▆
     1. └─TreeSearch::MaximizeParsimony(...) at test-MaximizeParsimony.R:87:3
     2.   └─TreeSearch (local) .ReturnValue(bestEdges)
     3.     ├─base::structure(...)
     4.     └─base::paste0(...)
    
    [ FAIL 1 | WARN 1 | SKIP 4 | PASS 7351 ]
    Error:
    ! Test failures.
    Execution halted