R Under development (unstable) (2026-02-23 r89469 ucrt) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(TreeMatcheR)
> 
> test_check("TreeMatcheR")
Evaluating 16100 hypotheses (Method: Exact Python Replication)...
Best: W=0.3158, dx=4.00, dy=3.00, theta=123.58
Linked Trees: Avg Diff 1.1503, SD 0.6806, Range 0.1253 - 3.1028
Saved transformed plot data to temporary directory: D:\temp\2026_02_24_10_05_17_20684\RtmpWYjA8S/OUT_Ground_Positions_trafo.txt
Saved other transformed data to temporary directory: D:\temp\2026_02_24_10_05_17_20684\RtmpWYjA8S/OUT_GroundPosOther_trafo.txt


--- First few rows of the transformed plot dataframe ---
  PLOT ID SPECIES STEMDIAM         Y            X X_trafo_p Y_trafo_p isLinked
1    6 73       2     21.3 -16.83972   1.01768320  330.9616  226.0109        1
2    6 74       2     48.0 -15.02722   2.76165154  328.4818  226.4318        1
3    6 75       2     26.2 -12.46991  -0.07185967  327.9636  222.6503        1
4    6 76       2     49.0 -12.73677  -4.67207261  330.7740  218.9986        1
5    6 77       2     43.0 -14.42013  -5.48482535  332.6229  219.2746        1
6    6 78       2     34.0 -12.66903 -10.24013566  333.8529  214.3587        1
  FILE_w  ID_w    X_w    Y_w   H_w  W_w
1     50 26087 333.25 226.25 24.53 5.38
2     50 26082 329.25 228.00 25.05 4.55
3     50 26084 329.75 222.50 26.77 5.63
4     50 26086 330.50 217.75 24.50 3.38
5     50 26091 332.50 219.25 15.43 2.44
6     50 26092 334.25 214.50 25.55 5.60
--------------------------------------------------------

[ FAIL 0 | WARN 0 | SKIP 0 | PASS 3 ]
> 
> proc.time()
   user  system elapsed 
 102.78   11.92  114.78