* installing *source* package ‘TreeDist’ ...
** using staged installation
** libs
using C++ compiler: ‘Debian clang version 16.0.6 (10)’
using C++17
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c day_1985.cpp -o day_1985.o
In file included from day_1985.cpp:4:
In file included from ./tree_distances.h:9:
./ints.h:9:21: warning: extension used [-Wlanguage-extension-token]
typedef std::vector<typeof(NA_INTEGER)> grf_match;
                    ^
1 warning generated.
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c lap.cpp -o lap.o
In file included from lap.cpp:27:
In file included from ./tree_distances.h:9:
./ints.h:9:21: warning: extension used [-Wlanguage-extension-token]
typedef std::vector<typeof(NA_INTEGER)> grf_match;
                    ^
1 warning generated.
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c mast.cpp -o mast.o
In file included from mast.cpp:3:
./ints.h:9:21: warning: extension used [-Wlanguage-extension-token]
typedef std::vector<typeof(NA_INTEGER)> grf_match;
                    ^
1 warning generated.
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c nni_distance.cpp -o nni_distance.o
In file included from nni_distance.cpp:6:
In file included from ./tree_distances.h:9:
./ints.h:9:21: warning: extension used [-Wlanguage-extension-token]
typedef std::vector<typeof(NA_INTEGER)> grf_match;
                    ^
1 warning generated.
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c tree_distance_functions.cpp -o tree_distance_functions.o
In file included from tree_distance_functions.cpp:6:
In file included from ./tree_distances.h:9:
./ints.h:9:21: warning: extension used [-Wlanguage-extension-token]
typedef std::vector<typeof(NA_INTEGER)> grf_match;
                    ^
1 warning generated.
clang++-16  -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN/Library/TreeTools/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c tree_distances.cpp -o tree_distances.o
In file included from tree_distances.cpp:5:
In file included from ./tree_distances.h:9:
./ints.h:9:21: warning: extension used [-Wlanguage-extension-token]
typedef std::vector<typeof(NA_INTEGER)> grf_match;
                    ^
1 warning generated.
clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o TreeDist.so RcppExports.o day_1985.o lap.o mast.o nni_distance.o tree_distance_functions.o tree_distances.o -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/TreeDist.Rcheck/00LOCK-TreeDist/00new/TreeDist/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (TreeDist)