installing dependencies ‘circlize’, ‘ComplexHeatmap’, ‘DESeq2’, ‘dplyr’, ‘edgeR’, ‘geomtextpath’, ‘ggalt’, ‘ggdensity’, ‘ggnewscale’, ‘ggplot2’, ‘ggpubr’, ‘ggraph’, ‘ggtree’, ‘ggtreeExtra’, ‘ggVennDiagram’, ‘Hmisc’, ‘hrbrthemes’, ‘knitr’, ‘limma’, ‘magrittr’, ‘prettydoc’, ‘rlang’, ‘rmarkdown’, ‘spiralize’, ‘stringr’, ‘sva’, ‘tibble’, ‘tidygraph’, ‘tidyr’ also installing the dependencies ‘rbibutils’, ‘bit’, ‘Deriv’, ‘modelr’, ‘microbenchmark’, ‘Rdpack’, ‘sys’, ‘bit64’, ‘blob’, ‘plogr’, ‘Biostrings’, ‘formatR’, ‘numDeriv’, ‘doBy’, ‘SparseM’, ‘MatrixModels’, ‘minqa’, ‘nloptr’, ‘reformulas’, ‘askpass’, ‘DBI’, ‘RSQLite’, ‘KEGGREST’, ‘XML’, ‘xtable’, ‘lambda.r’, ‘futile.options’, ‘UCSC.utils’, ‘GenomeInfoDbData’, ‘zlibbioc’, ‘abind’, ‘SparseArray’, ‘gridGraphics’, ‘backports’, ‘carData’, ‘pbkrtest’, ‘quantreg’, ‘lme4’, ‘fontBitstreamVera’, ‘fontLiberation’, ‘curl’, ‘openssl’, ‘later’, ‘rappdirs’, ‘utf8’, ‘AnnotationDbi’, ‘annotate’, ‘futile.logger’, ‘snow’, ‘BH’, ‘GenomeInfoDb’, ‘XVector’, ‘S4Arrays’, ‘DelayedArray’, ‘farver’, ‘labeling’, ‘munsell’, ‘viridisLite’, ‘ggplotify’, ‘patchwork’, ‘admisc’, ‘fs’, ‘broom’, ‘corrplot’, ‘car’, ‘lazyeval’, ‘extrafontdb’, ‘Rttf2pt1’, ‘fontquiver’, ‘tweenr’, ‘polyclip’, ‘RcppEigen’, ‘cachem’, ‘httr’, ‘htmlwidgets’, ‘crosstalk’, ‘promises’, ‘checkmate’, ‘rstudioapi’, ‘fastmap’, ‘rjson’, ‘crayon’, ‘timechange’, ‘iterators’, ‘mime’, ‘sass’, ‘cli’, ‘generics’, ‘glue’, ‘lifecycle’, ‘pillar’, ‘R6’, ‘tidyselect’, ‘vctrs’, ‘fansi’, ‘pkgconfig’, ‘genefilter’, ‘BiocParallel’, ‘matrixStats’, ‘S4Vectors’, ‘IRanges’, ‘GenomicRanges’, ‘SummarizedExperiment’, ‘BiocGenerics’, ‘Biobase’, ‘locfit’, ‘Rcpp’, ‘MatrixGenerics’, ‘RcppArmadillo’, ‘statmod’, ‘gtable’, ‘isoband’, ‘scales’, ‘withr’, ‘aplot’, ‘venn’, ‘yulab.utils’, ‘forcats’, ‘ggrepel’, ‘ggsci’, ‘purrr’, ‘cowplot’, ‘ggsignif’, ‘gridExtra’, ‘polynom’, ‘rstatix’, ‘ape’, ‘ggfun’, ‘tidytree’, ‘treeio’, ‘extrafont’, ‘gdtools’, ‘ggforce’, ‘igraph’, ‘viridis’, ‘graphlayouts’, ‘memoise’, ‘cpp11’, ‘stringi’, ‘systemfonts’, ‘textshaping’, ‘RColorBrewer’, ‘proj4’, ‘ash’, ‘maps’, ‘plotly’, ‘data.table’, ‘htmlTable’, ‘htmltools’, ‘base64enc’, ‘colorspace’, ‘Formula’, ‘GlobalOptions’, ‘shape’, ‘GetoptLong’, ‘lubridate’, ‘clue’, ‘png’, ‘digest’, ‘foreach’, ‘doParallel’, ‘evaluate’, ‘highr’, ‘xfun’, ‘yaml’, ‘bslib’, ‘fontawesome’, ‘jquerylib’, ‘jsonlite’, ‘tinytex’ begin installing package ‘rbibutils’ begin installing package ‘bit’ begin installing package ‘Deriv’ begin installing package ‘microbenchmark’ begin installing package ‘sys’ begin installing package ‘plogr’ begin installing package ‘formatR’ begin installing package ‘numDeriv’ begin installing package ‘SparseM’ begin installing package ‘MatrixModels’ begin installing package ‘nloptr’ begin installing package ‘DBI’ begin installing package ‘XML’ begin installing package ‘xtable’ begin installing package ‘futile.options’ begin installing package ‘GenomeInfoDbData’ begin installing package ‘zlibbioc’ begin installing package ‘abind’ begin installing package ‘gridGraphics’ begin installing package ‘carData’ begin installing package ‘backports’ begin installing package ‘fontBitstreamVera’ begin installing package ‘fontLiberation’ begin installing package ‘curl’ begin installing package ‘rappdirs’ begin installing package ‘utf8’ begin installing package ‘snow’ begin installing package ‘BH’ * installing *source* package ‘fontBitstreamVera’ ... ** this is package ‘fontBitstreamVera’ version ‘0.1.1’ ** package ‘fontBitstreamVera’ successfully unpacked and MD5 sums checked ** using staged installation ** inst ** help No man pages found in package ‘fontBitstreamVera’ *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontBitstreamVera) begin installing package ‘farver’ * installing *source* package ‘plogr’ ... ** this is package ‘plogr’ version ‘0.2.0’ ** package ‘plogr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plogr) begin installing package ‘labeling’ * installing *source* package ‘fontLiberation’ ... ** this is package ‘fontLiberation’ version ‘0.1.0’ ** package ‘fontLiberation’ successfully unpacked and MD5 sums checked ** using staged installation ** inst ** help No man pages found in package ‘fontLiberation’ *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontLiberation) begin installing package ‘viridisLite’ * installing *source* package ‘futile.options’ ... ** this is package ‘futile.options’ version ‘1.0.1’ ** package ‘futile.options’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (futile.options) begin installing package ‘admisc’ * installing *source* package ‘rappdirs’ ... ** this is package ‘rappdirs’ version ‘0.3.3’ ** package ‘rappdirs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphIQDbs/R.INSTALL182e1c147fca46/rappdirs/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c win-path.c -o win-path.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rappdirs.so init.o win-path.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphIQDbs/R.INSTALL182e1c147fca46/rappdirs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rappdirs/00new/rappdirs/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rappdirs) begin installing package ‘fs’ * installing *source* package ‘zlibbioc’ ... ** this is package ‘zlibbioc’ version ‘1.52.0’ ** package ‘zlibbioc’ successfully unpacked and MD5 sums checked ** using staged installation configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphHUV9m/R.INSTALL182dfd3cd26a10/zlibbioc/src' mkdir -p "/home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-zlibbioc/00new/zlibbioc/include" clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_zlibbioc.c -o R_init_zlibbioc.o R_init_zlibbioc.c:1:20: warning: ISO C requires a translation unit to contain at least one declaration [-Wempty-translation-unit] 1 | /* do not remove */ | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o zlibbioc.so R_init_zlibbioc.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphHUV9m/R.INSTALL182dfd3cd26a10/zlibbioc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-zlibbioc/00new/zlibbioc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in fun(libname, pkgname) : Package 'zlibbioc' is deprecated and will be removed from Bioconductor version 3.22 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning in fun(libname, pkgname) : Package 'zlibbioc' is deprecated and will be removed from Bioconductor version 3.22 ** testing if installed package keeps a record of temporary installation path * DONE (zlibbioc) begin installing package ‘corrplot’ * installing *source* package ‘sys’ ... ** this is package ‘sys’ version ‘3.4.3’ ** package ‘sys’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8XmdCC/R.INSTALL182df63ef8408d/sys/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c exec.c -o exec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sys.so exec.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8XmdCC/R.INSTALL182df63ef8408d/sys/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sys/00new/sys/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sys) begin installing package ‘lazyeval’ * installing *source* package ‘GenomeInfoDbData’ ... ** this is package ‘GenomeInfoDbData’ version ‘1.2.13’ ** using staged installation ** data ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomeInfoDbData) begin installing package ‘extrafontdb’ * installing *source* package ‘numDeriv’ ... ** this is package ‘numDeriv’ version ‘2016.8-1.1’ ** package ‘numDeriv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (numDeriv) begin installing package ‘Rttf2pt1’ * installing *source* package ‘formatR’ ... ** this is package ‘formatR’ version ‘1.14’ ** package ‘formatR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (formatR) begin installing package ‘polyclip’ * installing *source* package ‘abind’ ... ** this is package ‘abind’ version ‘1.4-8’ ** package ‘abind’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (abind) begin installing package ‘rstudioapi’ * installing *source* package ‘carData’ ... ** this is package ‘carData’ version ‘3.0-5’ ** package ‘carData’ successfully unpacked and MD5 sums checked ** using staged installation ** data *** moving datasets to lazyload DB ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (carData) begin installing package ‘fastmap’ * installing *source* package ‘backports’ ... ** this is package ‘backports’ version ‘1.5.0’ ** package ‘backports’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjhxsTm/R.INSTALL182e14e1ba52a/backports/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsElt.c -o dotsElt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsLength.c -o dotsLength.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dotsNames.c -o dotsNames.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o backports.so dotsElt.o dotsLength.o dotsNames.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjhxsTm/R.INSTALL182e14e1ba52a/backports/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-backports/00new/backports/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (backports) begin installing package ‘rjson’ * installing *source* package ‘snow’ ... ** this is package ‘snow’ version ‘0.4-4’ ** package ‘snow’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (snow) begin installing package ‘crayon’ * installing *source* package ‘extrafontdb’ ... ** this is package ‘extrafontdb’ version ‘1.0’ ** package ‘extrafontdb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (extrafontdb) * installing *source* package ‘microbenchmark’ ... ** this is package ‘microbenchmark’ version ‘1.5.0’ ** package ‘microbenchmark’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to enable C11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for stdint.h... (cached) yes checking for stdlib.h... (cached) yes checking for sys/time.h... yes checking for uint64_t... yes checking for error_at_line... yes checking for mach_absolute_time... no checking for library containing clock_gettime... none required checking for best clockid_t to use with clock_gettime... CLOCK_MONOTONIC_RAW configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpzzN7Pc/R.INSTALL182de6514ba621/microbenchmark/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -D_POSIX_C_SOURCE=200112L -DHAVE_CONFIG_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c do_nothing.c -o do_nothing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -D_POSIX_C_SOURCE=200112L -DHAVE_CONFIG_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -D_POSIX_C_SOURCE=200112L -DHAVE_CONFIG_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nanotimer.c -o nanotimer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o microbenchmark.so do_nothing.o init.o nanotimer.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpzzN7Pc/R.INSTALL182de6514ba621/microbenchmark/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-microbenchmark/00new/microbenchmark/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (microbenchmark) * installing *source* package ‘viridisLite’ ... ** this is package ‘viridisLite’ version ‘0.4.2’ ** package ‘viridisLite’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viridisLite) begin installing package ‘iterators’ begin installing package ‘mime’ begin installing package ‘cli’ * installing *source* package ‘xtable’ ... ** this is package ‘xtable’ version ‘1.8-4’ ** package ‘xtable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xtable) begin installing package ‘generics’ * installing *source* package ‘labeling’ ... ** this is package ‘labeling’ version ‘0.4.3’ ** package ‘labeling’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (labeling) begin installing package ‘glue’ * installing *source* package ‘Deriv’ ... ** this is package ‘Deriv’ version ‘4.1.6’ ** package ‘Deriv’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Deriv) begin installing package ‘R6’ * installing *source* package ‘utf8’ ... ** this is package ‘utf8’ version ‘1.2.4’ ** package ‘utf8’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpoEA9AY/R.INSTALL182e1f54799cc4/utf8/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c as_utf8.c -o as_utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c bytes.c -o bytes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c context.c -o context.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c render.c -o render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c render_table.c -o render_table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c string.c -o string.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c text.c -o text.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_encode.c -o utf8_encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_format.c -o utf8_format.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_normalize.c -o utf8_normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_valid.c -o utf8_valid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8_width.c -o utf8_width.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c util.c -o util.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/array.c -o utf8lite/src/array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/char.c -o utf8lite/src/char.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/encode.c -o utf8lite/src/encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/error.c -o utf8lite/src/error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/escape.c -o utf8lite/src/escape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/graph.c -o utf8lite/src/graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/render.c -o utf8lite/src/render.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/text.c -o utf8lite/src/text.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -Iutf8lite/src -fpic -g -O3 -Wall -pedantic -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpoEA9AY/R.INSTALL182e1f54799cc4/utf8/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-utf8/00new/utf8/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (utf8) begin installing package ‘fansi’ * installing *source* package ‘nloptr’ ... ** this is package ‘nloptr’ version ‘2.1.1’ ** package ‘nloptr’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... (cached) yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... (cached) none needed checking for pkg-config... /usr/bin/pkg-config checking if pkg-config knows NLopt... yes checking for pkg-config checking NLopt version... >= 2.7.0 configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpR8HPlr/R.INSTALL182def73e8d14b/nloptr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c dummy.cpp -o dummy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init_nloptr.c -o init_nloptr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nloptr.c -o nloptr.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o nloptr.so dummy.o init_nloptr.o nloptr.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -lnlopt -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpR8HPlr/R.INSTALL182def73e8d14b/nloptr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-nloptr/00new/nloptr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nloptr) begin installing package ‘pkgconfig’ * installing *source* package ‘curl’ ... ** this is package ‘curl’ version ‘6.2.0’ ** package ‘curl’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 Using PKG_LIBS=-lcurl Found recent recent version of libcurl ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpkLKjx1/R.INSTALL182e1d11c455bd/curl/src' rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o findport.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o options.o reflist.o split.o ssl.o typechecking.o urlparser.o utils.o version.o winidn.o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c callbacks.c -o callbacks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c curl.c -o curl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c download.c -o download.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c escape.c -o escape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fetch.c -o fetch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c findport.c -o findport.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c form.c -o form.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c getdate.c -o getdate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c handle.c -o handle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ieproxy.c -o ieproxy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c interrupt.c -o interrupt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c multi.c -o multi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c nslookup.c -o nslookup.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c options.c -o options.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c reflist.c -o reflist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c split.c -o split.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ssl.c -o ssl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typechecking.c -o typechecking.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c urlparser.c -o urlparser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c winidn.c -o winidn.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/x86_64-linux-gnu -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c writer.c -o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o curl.so callbacks.o curl.o download.o escape.o fetch.o findport.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o options.o reflist.o split.o ssl.o typechecking.o urlparser.o utils.o version.o winidn.o writer.o -lcurl -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpkLKjx1/R.INSTALL182e1d11c455bd/curl/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-curl/00new/curl/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (curl) begin installing package ‘matrixStats’ * installing *source* package ‘lazyeval’ ... ** this is package ‘lazyeval’ version ‘0.2.2’ ** package ‘lazyeval’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp1watDq/R.INSTALL183b3b39005e0/lazyeval/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c expr.c -o expr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c interp.c -o interp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lazy.c -o lazy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c name.c -o name.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o lazyeval.so expr.o init.o interp.o lazy.o name.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp1watDq/R.INSTALL183b3b39005e0/lazyeval/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-lazyeval/00new/lazyeval/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lazyeval) begin installing package ‘BiocGenerics’ * installing *source* package ‘corrplot’ ... ** this is package ‘corrplot’ version ‘0.95’ ** package ‘corrplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (corrplot) begin installing package ‘locfit’ * installing *source* package ‘rjson’ ... ** this is package ‘rjson’ version ‘0.2.23’ ** package ‘rjson’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaptFWD/R.INSTALL183dd52962f420/rjson/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c dump.cpp -o dump.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c parser.c -o parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c register.c -o register.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rjson.so dump.o parser.o register.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaptFWD/R.INSTALL183dd52962f420/rjson/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rjson/00new/rjson/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rjson) begin installing package ‘Rcpp’ * installing *source* package ‘mime’ ... ** this is package ‘mime’ version ‘0.12’ ** package ‘mime’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuYj7Tr/R.INSTALL1840735dc665a7/mime/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rawmatch.c -o rawmatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o mime.so init.o rawmatch.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuYj7Tr/R.INSTALL1840735dc665a7/mime/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-mime/00new/mime/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mime) begin installing package ‘statmod’ * installing *source* package ‘iterators’ ... ** this is package ‘iterators’ version ‘1.0.14’ ** package ‘iterators’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iterators) begin installing package ‘isoband’ * installing *source* package ‘rstudioapi’ ... ** this is package ‘rstudioapi’ version ‘0.17.1’ ** package ‘rstudioapi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rstudioapi) begin installing package ‘withr’ * installing *source* package ‘crayon’ ... ** this is package ‘crayon’ version ‘1.5.3’ ** package ‘crayon’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crayon) begin installing package ‘polynom’ * installing *source* package ‘generics’ ... ** this is package ‘generics’ version ‘0.1.3’ ** package ‘generics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (generics) begin installing package ‘cpp11’ * installing *source* package ‘pkgconfig’ ... ** this is package ‘pkgconfig’ version ‘2.0.3’ ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pkgconfig) begin installing package ‘stringi’ * installing *source* package ‘gridGraphics’ ... ** this is package ‘gridGraphics’ version ‘0.5-1’ ** package ‘gridGraphics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gridGraphics) begin installing package ‘RColorBrewer’ * installing *source* package ‘R6’ ... ** this is package ‘R6’ version ‘2.5.1’ ** package ‘R6’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (R6) begin installing package ‘proj4’ * installing *source* package ‘fastmap’ ... ** this is package ‘fastmap’ version ‘1.2.0’ ** package ‘fastmap’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVnJDbp/R.INSTALL183dc8a8de57f/fastmap/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Ilib/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DR_NO_REMAP -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fastmap.cpp -o fastmap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Ilib/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fastmap.so fastmap.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVnJDbp/R.INSTALL183dc8a8de57f/fastmap/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fastmap/00new/fastmap/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fastmap) begin installing package ‘ash’ * installing *source* package ‘glue’ ... ** this is package ‘glue’ version ‘1.8.0’ ** package ‘glue’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVjgdkq/R.INSTALL1841a34c4dc79a/glue/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c glue.c -o glue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c trim.c -o trim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o glue.so glue.o init.o trim.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVjgdkq/R.INSTALL1841a34c4dc79a/glue/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-glue/00new/glue/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glue) begin installing package ‘maps’ * installing *source* package ‘DBI’ ... ** this is package ‘DBI’ version ‘1.2.3’ ** package ‘DBI’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DBI) begin installing package ‘data.table’ * installing *source* package ‘cpp11’ ... ** this is package ‘cpp11’ version ‘0.5.1’ ** package ‘cpp11’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cpp11) begin installing package ‘base64enc’ * installing *source* package ‘ash’ ... ** this is package ‘ash’ version ‘1.0-15’ ** package ‘ash’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpYBkaFN/R.INSTALL18467553415ef9/ash/src' flang-new-19 -fpic -g -O2 -c ash.f -o ash.o flang-new-19 -fpic -g -O2 -c sort.f -o sort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ash.so ash.o sort.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpYBkaFN/R.INSTALL18467553415ef9/ash/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ash/00new/ash/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ash) begin installing package ‘colorspace’ * installing *source* package ‘polynom’ ... ** this is package ‘polynom’ version ‘1.4-1’ ** package ‘polynom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (polynom) begin installing package ‘Formula’ * installing *source* package ‘withr’ ... ** this is package ‘withr’ version ‘3.0.2’ ** package ‘withr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (withr) begin installing package ‘GlobalOptions’ * installing *source* package ‘RColorBrewer’ ... ** this is package ‘RColorBrewer’ version ‘1.1-3’ ** package ‘RColorBrewer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RColorBrewer) begin installing package ‘shape’ * installing *source* package ‘admisc’ ... ** this is package ‘admisc’ version ‘0.37’ ** package ‘admisc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNQD5E8/R.INSTALL183a407e509184/admisc/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c admisc.c -o admisc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c registerDynamicSymbol.c -o registerDynamicSymbol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o admisc.so admisc.o registerDynamicSymbol.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNQD5E8/R.INSTALL183a407e509184/admisc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-admisc/00new/admisc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (admisc) begin installing package ‘clue’ * installing *source* package ‘SparseM’ ... ** this is package ‘SparseM’ version ‘1.84-2’ ** package ‘SparseM’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPkbbYh/R.INSTALL182dd62adee458/SparseM/src' flang-new-19 -fpic -g -O2 -c bckslv.f -o bckslv.o flang-new-19 -fpic -g -O2 -c chol.f -o chol.o flang-new-19 -fpic -g -O2 -c chol2csr.f -o chol2csr.o flang-new-19 -fpic -g -O2 -c cholesky.f -o cholesky.o ./cholesky.f:65:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:724:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:815:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:903:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:929:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:2561:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3746:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3934:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4221:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4754:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ flang-new-19 -fpic -g -O2 -c csr.f -o csr.o flang-new-19 -fpic -g -O2 -c extract.f -o extract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o flang-new-19 -fpic -g -O2 -c sparskit.f -o sparskit.o flang-new-19 -fpic -g -O2 -c subscr.f -o subscr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o SparseM.so bckslv.o chol.o chol2csr.o cholesky.o csr.o extract.o init.o sparskit.o subscr.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPkbbYh/R.INSTALL182dd62adee458/SparseM/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-SparseM/00new/SparseM/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘diag’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘diag<-’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘norm’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘backsolve’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘forwardsolve’ from package ‘base’ in package ‘SparseM’ Creating a generic function for ‘model.response’ from package ‘stats’ in package ‘SparseM’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SparseM) begin installing package ‘png’ * installing *source* package ‘MatrixModels’ ... ** this is package ‘MatrixModels’ version ‘0.5-3’ ** package ‘MatrixModels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MatrixModels) begin installing package ‘digest’ * installing *source* package ‘proj4’ ... ** this is package ‘proj4’ version ‘1.0-14’ ** package ‘proj4’ successfully unpacked and MD5 sums checked ** using staged installation checking whether pkg-config knows about proj... yes checking CFLAGS from pkg-config... -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 checking LIBS from pkg-config... checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for proj_api.h... no checking with ACCEPT_USE_OF_DEPRECATED_PROJ_API_H... checking for proj_api.h... no checking for proj.h... yes checking for proj_get_source_crs in -lproj... yes configure: PROJ4 API available: no configure: PROJ6 API available: yes checking whether to require PROJ6 API... no checking whether to use PROJ6 API... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLHQkiI/R.INSTALL18463f30d9ed83/proj4/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSE_PROJ6_API=1 -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c p4.c -o p4.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSE_PROJ6_API=1 -I/usr/local/include -I/usr/include/x86_64-linux-gnu -I/usr/include/webp -isystem /usr/include/mit-krb5 -I/usr/include/p11-kit-1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reg.c -o reg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o proj4.so p4.o reg.o -lproj -lproj -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLHQkiI/R.INSTALL18463f30d9ed83/proj4/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-proj4/00new/proj4/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (proj4) begin installing package ‘evaluate’ * installing *source* package ‘base64enc’ ... ** this is package ‘base64enc’ version ‘0.1-3’ ** package ‘base64enc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpevXjV8/R.INSTALL184de83aff0715/base64enc/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c uriencode.c -o uriencode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o base64enc.so base64.o uriencode.o utf8.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpevXjV8/R.INSTALL184de83aff0715/base64enc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-base64enc/00new/base64enc/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (base64enc) begin installing package ‘xfun’ * installing *source* package ‘bit’ ... ** this is package ‘bit’ version ‘4.5.0.1’ ** package ‘bit’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpM5J9nX/R.INSTALL182dda6d374da/bit/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c attrutil.c -o attrutil.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bit.c -o bit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c chunkutil.c -o chunkutil.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c clone.c -o clone.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integerutil.c -o integerutil.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c merge.c -o merge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rle.c -o rle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort.c -o sort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o bit.so attrutil.o bit.o chunkutil.o clone.o init.o integerutil.o merge.o rle.o sort.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpM5J9nX/R.INSTALL182dda6d374da/bit/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-bit/00new/bit/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit) begin installing package ‘yaml’ * installing *source* package ‘fansi’ ... ** this is package ‘fansi’ version ‘1.0.6’ ** package ‘fansi’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4OWYVF/R.INSTALL1842507450ff60/fansi/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c assumptions.c -o assumptions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c carry.c -o carry.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c has.c -o has.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c nchar.c -o nchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c normalize.c -o normalize.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c read.c -o read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rnchar.c -o rnchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c state.c -o state.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c strip.c -o strip.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c substr.c -o substr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tabs.c -o tabs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c tohtml.c -o tohtml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c trimws.c -o trimws.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c unhandled.c -o unhandled.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c wrap.c -o wrap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fansi.so assumptions.o carry.o has.o init.o nchar.o normalize.o read.o rnchar.o state.o strip.o substr.o tabs.o tohtml.o trimws.o unhandled.o utf8.o utils.o wrap.o write.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4OWYVF/R.INSTALL1842507450ff60/fansi/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fansi/00new/fansi/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fansi) begin installing package ‘jsonlite’ * installing *source* package ‘Formula’ ... ** this is package ‘Formula’ version ‘1.2-5’ ** package ‘Formula’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Formula) begin installing package ‘magrittr’ * installing *source* package ‘polyclip’ ... ** this is package ‘polyclip’ version ‘1.10-7’ ** package ‘polyclip’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C++ compiler... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes Using PKG_CONFIG: pkgconf Compiling against bundled copy of clipper library. checking for int64_t... yes In the clipper library, signed 64-bit integers (cInt) will be declared as 'int64_t' checking for uint64_t... yes In the clipper library, unsigned 64-bit integers (cUInt) will be declared as 'uint64_t' configure: creating ./config.status config.status: creating src/Makevars ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnJdBF1/R.INSTALL183c743c6c8185/polyclip/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPOLYCLIP_LONG64="int64_t" -DPOLYCLIP_ULONG64="uint64_t" -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPOLYCLIP_LONG64="int64_t" -DPOLYCLIP_ULONG64="uint64_t" -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c interface.cpp -o interface.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DPOLYCLIP_LONG64="int64_t" -DPOLYCLIP_ULONG64="uint64_t" -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c clipper.cpp -o clipper.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o polyclip.so init.o interface.o clipper.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnJdBF1/R.INSTALL183c743c6c8185/polyclip/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-polyclip/00new/polyclip/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (polyclip) begin installing package ‘rlang’ * installing *source* package ‘png’ ... ** this is package ‘png’ version ‘0.1-8’ ** package ‘png’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpjwuqns/R.INSTALL18528d40b71961/png/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 `libpng-config --cflags` -fpic -g -O3 -Wall -pedantic -c dummy.c -o dummy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 `libpng-config --cflags` -fpic -g -O3 -Wall -pedantic -c read.c -o read.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 `libpng-config --cflags` -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o png.so dummy.o read.o write.o -lpng16 -lz -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpjwuqns/R.INSTALL18528d40b71961/png/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-png/00new/png/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (png) begin installing package ‘bit64’ * installing *source* package ‘BiocGenerics’ ... ** this is package ‘BiocGenerics’ version ‘0.52.0’ ** package ‘BiocGenerics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘aperm’ in package ‘BiocGenerics’ Creating a new generic function for ‘append’ in package ‘BiocGenerics’ Creating a new generic function for ‘as.data.frame’ in package ‘BiocGenerics’ Creating a new generic function for ‘cbind’ in package ‘BiocGenerics’ Creating a new generic function for ‘rbind’ in package ‘BiocGenerics’ Creating a new generic function for ‘do.call’ in package ‘BiocGenerics’ Creating a new generic function for ‘duplicated’ in package ‘BiocGenerics’ Creating a new generic function for ‘anyDuplicated’ in package ‘BiocGenerics’ Creating a new generic function for ‘eval’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmax’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmin’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmax.int’ in package ‘BiocGenerics’ Creating a new generic function for ‘pmin.int’ in package ‘BiocGenerics’ Creating a new generic function for ‘Reduce’ in package ‘BiocGenerics’ Creating a new generic function for ‘Filter’ in package ‘BiocGenerics’ Creating a new generic function for ‘Find’ in package ‘BiocGenerics’ Creating a new generic function for ‘Map’ in package ‘BiocGenerics’ Creating a new generic function for ‘Position’ in package ‘BiocGenerics’ Creating a new generic function for ‘get’ in package ‘BiocGenerics’ Creating a new generic function for ‘mget’ in package ‘BiocGenerics’ Creating a new generic function for ‘grep’ in package ‘BiocGenerics’ Creating a new generic function for ‘grepl’ in package ‘BiocGenerics’ Creating a new generic function for ‘is.unsorted’ in package ‘BiocGenerics’ Creating a new generic function for ‘lapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘sapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘mapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘match’ in package ‘BiocGenerics’ Creating a new generic function for ‘order’ in package ‘BiocGenerics’ Creating a new generic function for ‘paste’ in package ‘BiocGenerics’ Creating a new generic function for ‘rank’ in package ‘BiocGenerics’ Creating a new generic function for ‘rownames’ in package ‘BiocGenerics’ Creating a new generic function for ‘colnames’ in package ‘BiocGenerics’ Creating a new generic function for ‘saveRDS’ in package ‘BiocGenerics’ Creating a new generic function for ‘union’ in package ‘BiocGenerics’ Creating a new generic function for ‘intersect’ in package ‘BiocGenerics’ Creating a new generic function for ‘setdiff’ in package ‘BiocGenerics’ Creating a new generic function for ‘table’ in package ‘BiocGenerics’ Creating a new generic function for ‘tapply’ in package ‘BiocGenerics’ Creating a new generic function for ‘unique’ in package ‘BiocGenerics’ Creating a new generic function for ‘unsplit’ in package ‘BiocGenerics’ Creating a new generic function for ‘var’ in package ‘BiocGenerics’ Creating a new generic function for ‘sd’ in package ‘BiocGenerics’ Creating a new generic function for ‘which.min’ in package ‘BiocGenerics’ Creating a new generic function for ‘which.max’ in package ‘BiocGenerics’ Creating a new generic function for ‘IQR’ in package ‘BiocGenerics’ Creating a new generic function for ‘mad’ in package ‘BiocGenerics’ Creating a new generic function for ‘xtabs’ in package ‘BiocGenerics’ Creating a new generic function for ‘basename’ in package ‘BiocGenerics’ Creating a new generic function for ‘dirname’ in package ‘BiocGenerics’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocGenerics) begin installing package ‘askpass’ * installing *source* package ‘statmod’ ... ** this is package ‘statmod’ version ‘1.5.0’ ** package ‘statmod’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpv78cO5/R.INSTALL1843da1365ada4/statmod/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c expectedDeviance.c -o expectedDeviance.o flang-new-19 -fpic -g -O2 -c gaussq2.f -o gaussq2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o statmod.so expectedDeviance.o gaussq2.o init.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpv78cO5/R.INSTALL1843da1365ada4/statmod/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-statmod/00new/statmod/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (statmod) begin installing package ‘lambda.r’ * installing *source* package ‘shape’ ... ** this is package ‘shape’ version ‘1.4.6.1’ ** package ‘shape’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shape) begin installing package ‘quantreg’ * installing *source* package ‘evaluate’ ... ** this is package ‘evaluate’ version ‘1.0.3’ ** package ‘evaluate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evaluate) begin installing package ‘fontquiver’ * installing *source* package ‘rbibutils’ ... ** this is package ‘rbibutils’ version ‘2.3’ ** package ‘rbibutils’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp0QNn5b/R.INSTALL182dd12b324d37/rbibutils/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c adsout.c -o adsout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any2xml.c -o any2xml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c args.c -o args.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bib2be.c -o bib2be.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibcore.c -o bibcore.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibentrydirectout.c -o bibentrydirectout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibentryout.c -o bibentryout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibl.c -o bibl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c biblatexin.c -o biblatexin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c biblatexout.c -o biblatexout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibprog.c -o bibprog.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtexdirectin.c -o bibtexdirectin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtexin.c -o bibtexin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtexout.c -o bibtexout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibtextypes.c -o bibtextypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bibutils.c -o bibutils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bltypes.c -o bltypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bu_auth.c -o bu_auth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c charsets.c -o charsets.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_be_bed.c -o common_be_bed.o common_be_bed.c:48:17: warning: variable 'nch' set but not used [-Wunused-but-set-variable] 48 | int nseps = 0, nch; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_blt_btd_out.c -o common_bt_blt_btd_out.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_btd.c -o common_bt_btd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_btd_blt.c -o common_bt_btd_blt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c common_bt_btd_out.c -o common_bt_btd_out.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c copacin.c -o copacin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c copactypes.c -o copactypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ebiin.c -o ebiin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endin.c -o endin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endout.c -o endout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endtypes.c -o endtypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c endxmlin.c -o endxmlin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c entities.c -o entities.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fields.c -o fields.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c gb18030.c -o gb18030.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c generic.c -o generic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c intlist.c -o intlist.o intlist.c:27:1: warning: unused function 'intlist_validn' [-Wunused-function] 27 | intlist_validn( intlist *il, int n ) | ^~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c is_ws.c -o is_ws.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c isiin.c -o isiin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c isiout.c -o isiout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c isitypes.c -o isitypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c iso639_1.c -o iso639_1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c iso639_2.c -o iso639_2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c iso639_3.c -o iso639_3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c latex.c -o latex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c latex_parse.c -o latex_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c marc_auth.c -o marc_auth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c medin.c -o medin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c modsin.c -o modsin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c modsout.c -o modsout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c modstypes.c -o modstypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c name.c -o name.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nbibin.c -o nbibin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nbibout.c -o nbibout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nbibtypes.c -o nbibtypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c notes.c -o notes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pages.c -o pages.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reftypes.c -o reftypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c risin.c -o risin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c risout.c -o risout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ristypes.c -o ristypes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c serialno.c -o serialno.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c slist.c -o slist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c str.c -o str.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c str_conv.c -o str_conv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c strsearch.c -o strsearch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c title.c -o title.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tomods.c -o tomods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c type.c -o type.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unicode.c -o unicode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c url.c -o url.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vplist.c -o vplist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wordin.c -o wordin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wordout.c -o wordout.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xml.c -o xml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xml2any.c -o xml2any.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xml_encoding.c -o xml_encoding.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rbibutils.so adsout.o any2xml.o args.o bib2be.o bibcore.o bibentrydirectout.o bibentryout.o bibl.o biblatexin.o biblatexout.o bibprog.o bibtexdirectin.o bibtexin.o bibtexout.o bibtextypes.o bibutils.o bltypes.o bu_auth.o charsets.o common_be_bed.o common_bt_blt_btd_out.o common_bt_btd.o common_bt_btd_blt.o common_bt_btd_out.o copacin.o copactypes.o ebiin.o endin.o endout.o endtypes.o endxmlin.o entities.o fields.o gb18030.o generic.o init.o intlist.o is_ws.o isiin.o isiout.o isitypes.o iso639_1.o iso639_2.o iso639_3.o latex.o latex_parse.o marc_auth.o medin.o modsin.o modsout.o modstypes.o name.o nbibin.o nbibout.o nbibtypes.o notes.o pages.o reftypes.o risin.o risout.o ristypes.o serialno.o slist.o str.o str_conv.o strsearch.o title.o tomods.o type.o unicode.o url.o utf8.o vplist.o wordin.o wordout.o xml.o xml2any.o xml_encoding.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0QNn5b/R.INSTALL182dd12b324d37/rbibutils/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rbibutils/00new/rbibutils/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rbibutils) begin installing package ‘checkmate’ * installing *source* package ‘GlobalOptions’ ... ** this is package ‘GlobalOptions’ version ‘0.1.2’ ** package ‘GlobalOptions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GlobalOptions) begin installing package ‘timechange’ * installing *source* package ‘magrittr’ ... ** this is package ‘magrittr’ version ‘2.0.3’ ** package ‘magrittr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaiMCbm/R.INSTALL185a2511808921/magrittr/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pipe.c -o pipe.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o magrittr.so pipe.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaiMCbm/R.INSTALL185a2511808921/magrittr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-magrittr/00new/magrittr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (magrittr) begin installing package ‘S4Vectors’ * installing *source* package ‘maps’ ... ** this is package ‘maps’ version ‘3.4.2.1’ ** package ‘maps’ successfully unpacked and MD5 sums checked ** using staged installation checking for gawk... gawk configure: creating ./config.status config.status: creating src/Makefile ** libs make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile init.o mapclip.o mapget.o smooth.o thin.o make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mapclip.c -o mapclip.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mapget.c -o mapget.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c smooth.c -o smooth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c thin.c -o thin.o make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' "/home/hornik/tmp/R-d-clang-xtra/bin/R" CMD SHLIB -o maps.so init.o mapclip.o mapget.o smooth.o thin.o make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o maps.so init.o mapclip.o mapget.o smooth.o thin.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile Gmake make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -I/usr/local/include -Wl,-O1 Gmake.c -o Gmake make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile Lmake make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -I/usr/local/include -Wl,-O1 Lmake.c -o Lmake make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile world2.line make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' Converting world to world2 gawk -f ./convert.awk < world.line > world2.line make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile county.L state.L usa.L nz.L world.L world2.L italy.L france.L state.vbm.L state.carto.L lakes.L make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' ./Lmake 0 s b county.line county.linestats ../inst/mapdata/county.L ./Lmake 0 s b state.line state.linestats ../inst/mapdata/state.L ./Lmake 0 s b usa.line usa.linestats ../inst/mapdata/usa.L ./Lmake 0 s b nz.line nz.linestats ../inst/mapdata/nz.L ./Lmake 0 s b world.line world.linestats ../inst/mapdata/world.L ./Lmake 0 s b world2.line world2.linestats ../inst/mapdata/world2.L ./Lmake 0 s b italy.line italy.linestats ../inst/mapdata/italy.L ./Lmake 0 s b france.line france.linestats ../inst/mapdata/france.L ./Lmake 0 p b state.vbm.line state.vbm.linestats ../inst/mapdata/state.vbm.L ./Lmake 0 p b state.carto.line state.carto.linestats ../inst/mapdata/state.carto.L ./Lmake 0 s b lakes.line lakes.linestats ../inst/mapdata/lakes.L make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile county.G state.G usa.G nz.G world.G world2.G italy.G france.G state.vbm.G state.carto.G lakes.G make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' ./Gmake b county.gon county.gonstats ../inst/mapdata/county.G ../inst/mapdata/county.L ./Gmake b state.gon state.gonstats ../inst/mapdata/state.G ../inst/mapdata/state.L ./Gmake b usa.gon usa.gonstats ../inst/mapdata/usa.G ../inst/mapdata/usa.L ./Gmake b nz.gon nz.gonstats ../inst/mapdata/nz.G ../inst/mapdata/nz.L ./Gmake b world.gon world.gonstats ../inst/mapdata/world.G ../inst/mapdata/world.L ./Gmake b world2.gon world2.gonstats ../inst/mapdata/world2.G ../inst/mapdata/world2.L ./Gmake b italy.gon italy.gonstats ../inst/mapdata/italy.G ../inst/mapdata/italy.L ./Gmake b france.gon france.gonstats ../inst/mapdata/france.G ../inst/mapdata/france.L ./Gmake b state.vbm.gon state.vbm.gonstats ../inst/mapdata/state.vbm.G ../inst/mapdata/state.vbm.L ./Gmake b state.carto.gon state.carto.gonstats ../inst/mapdata/state.carto.G ../inst/mapdata/state.carto.L ./Gmake b lakes.gon lakes.gonstats ../inst/mapdata/lakes.G ../inst/mapdata/lakes.L make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make -f "/home/hornik/tmp/R-d-clang-xtra/etc/Makeconf" -f Makefile county.N state.N usa.N nz.N world.N world2.N italy.N france.N state.vbm.N state.carto.N lakes.N make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHCVHX8/R.INSTALL18469f1fc704fe/maps/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-maps/00new/maps/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (maps) begin installing package ‘Biobase’ * installing *source* package ‘isoband’ ... ** this is package ‘isoband’ version ‘0.2.7’ ** package ‘isoband’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpnapAES/R.INSTALL1844494a068c1f/isoband/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c clip-lines.cpp -o clip-lines.o clip-lines.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c isoband.cpp -o isoband.o isoband.cpp:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c polygon.cpp -o polygon.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c separate-polygons.cpp -o separate-polygons.o separate-polygons.cpp:1:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 1 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-clip-lines.cpp -o test-clip-lines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-runner.cpp -o test-runner.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c test-separate-polygons.cpp -o test-separate-polygons.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpnapAES/R.INSTALL1844494a068c1f/isoband/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-isoband/00new/isoband/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (isoband) begin installing package ‘venn’ * installing *source* package ‘askpass’ ... ** this is package ‘askpass’ version ‘1.2.1’ ** package ‘askpass’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbUakqf/R.INSTALL185c4876b0c286/askpass/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c askpass.c -o askpass.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o askpass.so askpass.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbUakqf/R.INSTALL185c4876b0c286/askpass/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-askpass/00new/askpass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (askpass) begin installing package ‘GetoptLong’ * installing *source* package ‘fontquiver’ ... ** this is package ‘fontquiver’ version ‘0.2.1’ ** package ‘fontquiver’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontquiver) begin installing package ‘foreach’ * installing *source* package ‘lambda.r’ ... ** this is package ‘lambda.r’ version ‘1.2.4’ ** package ‘lambda.r’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lambda.r) begin installing package ‘limma’ * installing *source* package ‘Rttf2pt1’ ... ** this is package ‘Rttf2pt1’ version ‘1.3.12’ ** package ‘Rttf2pt1’ successfully unpacked and MD5 sums checked ** using staged installation ** libs make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmps1NjNM/R.INSTALL183b98751b8f87/Rttf2pt1/src' echo "make ttf2pt1 in ttf2pt1/ ..." make ttf2pt1 in ttf2pt1/ ... (cd ttf2pt1; make CC="`"/home/hornik/tmp/R-d-clang-xtra/bin/R" CMD config CC`" CFLAGS="-g -O3 -Wall -pedantic" ttf2pt1) make[2]: Entering directory '/home/hornik/tmp/scratch/Rtmps1NjNM/R.INSTALL183b98751b8f87/Rttf2pt1/src/ttf2pt1' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c ttf2pt1.c In file included from ttf2pt1.c:85: ./global.h:90:30: warning: '/*' within block comment [-Wcomment] 90 | /* #define DBG_GLYPH "C118" /* */ | ^ ttf2pt1.c:1327:12: warning: '&&' within '||' [-Wlogical-op-parentheses] 1327 | || i==0 && isdigit(c)) { /* must not start with a digit */ | ~~ ~~~~~^~~~~~~~~~~~~ ttf2pt1.c:1327:12: note: place parentheses around the '&&' expression to silence this warning 1327 | || i==0 && isdigit(c)) { /* must not start with a digit */ | ~~~~~^~~~~~~~~~~~~ ttf2pt1.c:1200:1: warning: unused function 'alignwidths' [-Wunused-function] 1200 | alignwidths(void) | ^~~~~~~~~~~ 3 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c pt1.c In file included from pt1.c:24: ./global.h:90:30: warning: '/*' within block comment [-Wcomment] 90 | /* #define DBG_GLYPH "C118" /* */ | ^ pt1.c:782:15: warning: '&&' within '||' [-Wlogical-op-parentheses] 782 | if (dx == 0 && dy == 0 | ~~~~~~~~^~~~~~~~~~ 783 | || x2 == x3 && y2 == y3) { | ~~ pt1.c:782:15: note: place parentheses around the '&&' expression to silence this warning 782 | if (dx == 0 && dy == 0 | ^ | ( ) pt1.c:783:19: warning: '&&' within '||' [-Wlogical-op-parentheses] 783 | || x2 == x3 && y2 == y3) { | ~~ ~~~~~~~~~^~~~~~~~~~~ pt1.c:783:19: note: place parentheses around the '&&' expression to silence this warning 783 | || x2 == x3 && y2 == y3) { | ^ | ( ) pt1.c:1399:37: warning: '&&' within '||' [-Wlogical-op-parentheses] 1399 | if(ge == 0 || ge->type != GE_LINE && ge->type!= GE_CURVE) { | ~~ ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ pt1.c:1399:37: note: place parentheses around the '&&' expression to silence this warning 1399 | if(ge == 0 || ge->type != GE_LINE && ge->type!= GE_CURVE) { | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ pt1.c:1607:36: warning: '&&' within '||' [-Wlogical-op-parentheses] 1607 | && (ge->iy3 < ge->prev->iy3 && ne->iy3 < ge->iy3 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 1608 | || ge->iy3 > ge->prev->iy3 && ne->iy3 > ge->iy3) | ~~ pt1.c:1607:36: note: place parentheses around the '&&' expression to silence this warning 1607 | && (ge->iy3 < ge->prev->iy3 && ne->iy3 < ge->iy3 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ pt1.c:1608:32: warning: '&&' within '||' [-Wlogical-op-parentheses] 1608 | || ge->iy3 > ge->prev->iy3 && ne->iy3 > ge->iy3) | ~~ ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ pt1.c:1608:32: note: place parentheses around the '&&' expression to silence this warning 1608 | || ge->iy3 > ge->prev->iy3 && ne->iy3 > ge->iy3) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ pt1.c:1624:34: warning: '&&' within '||' [-Wlogical-op-parentheses] 1624 | && (ge->ix3 < ge->prev->ix3 && ne->ix3 < ge->ix3 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ 1625 | || ge->ix3 > ge->prev->ix3 && ne->ix3 > ge->ix3) | ~~ pt1.c:1624:34: note: place parentheses around the '&&' expression to silence this warning 1624 | && (ge->ix3 < ge->prev->ix3 && ne->ix3 < ge->ix3 | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ pt1.c:1625:32: warning: '&&' within '||' [-Wlogical-op-parentheses] 1625 | || ge->ix3 > ge->prev->ix3 && ne->ix3 > ge->ix3) | ~~ ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ pt1.c:1625:32: note: place parentheses around the '&&' expression to silence this warning 1625 | || ge->ix3 > ge->prev->ix3 && ne->ix3 > ge->ix3) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ pt1.c:1813:19: warning: '&' within '^' [-Wbitwise-op-parentheses] 1813 | (s[i].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~ pt1.c:1813:19: note: place parentheses around the '&' expression to silence this warning 1813 | (s[i].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ^ | ( ) pt1.c:1815:19: warning: '&' within '^' [-Wbitwise-op-parentheses] 1815 | (s[j].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~ pt1.c:1815:19: note: place parentheses around the '&' expression to silence this warning 1815 | (s[j].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ^ | ( ) pt1.c:1820:19: warning: '&' within '^' [-Wbitwise-op-parentheses] 1820 | (s[i].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~ pt1.c:1820:19: note: place parentheses around the '&' expression to silence this warning 1820 | (s[i].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ^ | ( ) pt1.c:1822:19: warning: '&' within '^' [-Wbitwise-op-parentheses] 1822 | (s[j].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~ pt1.c:1822:19: note: place parentheses around the '&' expression to silence this warning 1822 | (s[j].flags & (ST_ZONE|ST_FLAT|ST_END) ^ ST_FLAT) | ^ | ( ) pt1.c:1844:27: warning: '&&' within '||' [-Wlogical-op-parentheses] 1844 | if (s1->from <= s2->from && s1->to >= s2->from | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ 1845 | || s2->from <= s1->from && s2->to >= s1->from) | ~~ pt1.c:1844:27: note: place parentheses around the '&&' expression to silence this warning 1844 | if (s1->from <= s2->from && s1->to >= s2->from | ^ | ( ) pt1.c:1845:30: warning: '&&' within '||' [-Wlogical-op-parentheses] 1845 | || s2->from <= s1->from && s2->to >= s1->from) | ~~ ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ pt1.c:1845:30: note: place parentheses around the '&&' expression to silence this warning 1845 | || s2->from <= s1->from && s2->to >= s1->from) | ^ | ( ) pt1.c:2205:25: warning: '&&' within '||' [-Wlogical-op-parentheses] 2205 | if (pri < readystem && s[nnew + 1].value >= stack[j].value | ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2206 | || !stemoverlap(&stack[j], &s[i])) | ~~ pt1.c:2205:25: note: place parentheses around the '&&' expression to silence this warning 2205 | if (pri < readystem && s[nnew + 1].value >= stack[j].value | ^ | ( ) pt1.c:2761:5: warning: '&&' within '||' [-Wlogical-op-parentheses] 2760 | || pri > lastpri | ~~ ~~~~~~~~~~~~~ 2761 | && ( lastpri==1 || s[j].value-v<20 || (s[x].value-v)*2 >= s[j].value-v ) ) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pt1.c:2761:5: note: place parentheses around the '&&' expression to silence this warning 2760 | || pri > lastpri | ( 2761 | && ( lastpri==1 || s[j].value-v<20 || (s[x].value-v)*2 >= s[j].value-v ) ) { | ^ | ) pt1.c:2780:5: warning: '&&' within '||' [-Wlogical-op-parentheses] 2779 | || pri > lastpri | ~~ ~~~~~~~~~~~~~ 2780 | && ( lastpri==1 || v-s[j].value<20 || (v-s[x].value)*2 >= v-s[j].value ) ) { | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pt1.c:2780:5: note: place parentheses around the '&&' expression to silence this warning 2779 | || pri > lastpri | ( 2780 | && ( lastpri==1 || v-s[j].value<20 || (v-s[x].value)*2 >= v-s[j].value ) ) { | ^ | ) pt1.c:2814:9: warning: unused variable 'j' [-Wunused-variable] 2814 | int i, j, from, to, val, dir; | ^ pt1.c:2933:19: warning: '&&' within '||' [-Wlogical-op-parentheses] 2933 | || pri==prevpri && prevwd==0 || wd!=0 && wdiy3 > ge->iy2 && ge->iy3 > ny | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 3491 | || ge->iy3 < ge->iy2 && ge->iy3 < ny) { | ~~ pt1.c:3490:27: note: place parentheses around the '&&' expression to silence this warning 3490 | if (ge->iy3 > ge->iy2 && ge->iy3 > ny | ^ | ( ) pt1.c:3491:26: warning: '&&' within '||' [-Wlogical-op-parentheses] 3491 | || ge->iy3 < ge->iy2 && ge->iy3 < ny) { | ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ pt1.c:3491:26: note: place parentheses around the '&&' expression to silence this warning 3491 | || ge->iy3 < ge->iy2 && ge->iy3 < ny) { | ^ | ( ) pt1.c:3512:27: warning: '&&' within '||' [-Wlogical-op-parentheses] 3512 | if (ge->ix3 > ge->ix2 && ge->ix3 > nx | ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 3513 | || ge->ix3 < ge->ix2 && ge->ix3 < nx) { | ~~ pt1.c:3512:27: note: place parentheses around the '&&' expression to silence this warning 3512 | if (ge->ix3 > ge->ix2 && ge->ix3 > nx | ^ | ( ) pt1.c:3513:26: warning: '&&' within '||' [-Wlogical-op-parentheses] 3513 | || ge->ix3 < ge->ix2 && ge->ix3 < nx) { | ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ pt1.c:3513:26: note: place parentheses around the '&&' expression to silence this warning 3513 | || ge->ix3 < ge->ix2 && ge->ix3 < nx) { | ^ | ( ) pt1.c:3682:32: warning: '&&' within '||' [-Wlogical-op-parentheses] 3682 | if (ge->iy3 > ge->prev->iy3 && ge->iy3 > ny | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 3683 | || ge->iy3 < ge->prev->iy3 && ge->iy3 < ny) { | ~~ pt1.c:3682:32: note: place parentheses around the '&&' expression to silence this warning 3682 | if (ge->iy3 > ge->prev->iy3 && ge->iy3 > ny | ^ | ( ) pt1.c:3683:31: warning: '&&' within '||' [-Wlogical-op-parentheses] 3683 | || ge->iy3 < ge->prev->iy3 && ge->iy3 < ny) { | ~~ ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ pt1.c:3683:31: note: place parentheses around the '&&' expression to silence this warning 3683 | || ge->iy3 < ge->prev->iy3 && ge->iy3 < ny) { | ^ | ( ) pt1.c:3704:32: warning: '&&' within '||' [-Wlogical-op-parentheses] 3704 | if (ge->ix3 > ge->prev->ix3 && ge->ix3 > nx | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ 3705 | || ge->ix3 < ge->prev->ix3 && ge->ix3 < nx) { | ~~ pt1.c:3704:32: note: place parentheses around the '&&' expression to silence this warning 3704 | if (ge->ix3 > ge->prev->ix3 && ge->ix3 > nx | ^ | ( ) pt1.c:3705:31: warning: '&&' within '||' [-Wlogical-op-parentheses] 3705 | || ge->ix3 < ge->prev->ix3 && ge->ix3 < nx) { | ~~ ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ pt1.c:3705:31: note: place parentheses around the '&&' expression to silence this warning 3705 | || ge->ix3 < ge->prev->ix3 && ge->ix3 < nx) { | ^ | ( ) pt1.c:3868:17: warning: '&&' within '||' [-Wlogical-op-parentheses] 3868 | || iln > 1. && iln/oln > 0.1 ) | ~~ ~~~~~~~~~~^~~~~~~~~~~~~~~~ pt1.c:3868:17: note: place parentheses around the '&&' expression to silence this warning 3868 | || iln > 1. && iln/oln > 0.1 ) | ^ | ( ) pt1.c:3841:18: warning: unused variable 'svdir' [-Wunused-variable] 3841 | int svdir, i, o; | ^~~~~ pt1.c:4231:21: warning: '&&' within '||' [-Wlogical-op-parentheses] 4231 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ~~ pt1.c:4231:21: note: place parentheses around the '&&' expression to silence this warning 4231 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ^ | ( ) pt1.c:4231:57: warning: '&&' within '||' [-Wlogical-op-parentheses] 4231 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ pt1.c:4231:57: note: place parentheses around the '&&' expression to silence this warning 4231 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ^ | ( ) pt1.c:4281:21: warning: '&&' within '||' [-Wlogical-op-parentheses] 4281 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ ~~ pt1.c:4281:21: note: place parentheses around the '&&' expression to silence this warning 4281 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ^ | ( ) pt1.c:4281:57: warning: '&&' within '||' [-Wlogical-op-parentheses] 4281 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ pt1.c:4281:57: note: place parentheses around the '&&' expression to silence this warning 4281 | if (k1+0.0001 >= k && k2 <= k+0.0001 || k1 <= k+0.0001 && k2+0.0001 >= k) | ^ | ( ) pt1.c:5112:12: warning: unused variable 'j' [-Wunused-variable] 5112 | int d, i, j; | ^ pt1.c:5296:7: warning: unused variable 'bc' [-Wunused-variable] 5296 | char bc[]="BC"; | ^~ pt1.c:5297:7: warning: unused variable 'xy' [-Wunused-variable] 5297 | char xy[]="XY"; | ^~ pt1.c:5549:16: warning: unused variable 'dx' [-Wunused-variable] 5549 | double t, nf, dx, d[2]; | ^~ pt1.c:5726:9: warning: unused variable 'avsd2' [-Wunused-variable] 5726 | double avsd2, dots[3][2 /*X,Y*/]; | ^~~~~ pt1.c:6145:17: warning: '&&' within '||' [-Wlogical-op-parentheses] 6145 | || pge != ge && (pgex->flags & GEXF_JCVMASK) <= (ngex->flags & GEXF_JCVMASK) ) { | ~~ ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pt1.c:6145:17: note: place parentheses around the '&&' expression to silence this warning 6145 | || pge != ge && (pgex->flags & GEXF_JCVMASK) <= (ngex->flags & GEXF_JCVMASK) ) { | ^ | ( ) pt1.c:5852:6: warning: unused variable 'found' [-Wunused-variable] 5852 | int found[2]; | ^~~~~ pt1.c:6303:23: warning: unused variable 'nge' [-Wunused-variable] 6303 | GENTRY *ge, *nge, *endge, *xge; | ^~~ pt1.c:6303:29: warning: unused variable 'endge' [-Wunused-variable] 6303 | GENTRY *ge, *nge, *endge, *xge; | ^~~~~ pt1.c:6303:37: warning: unused variable 'xge' [-Wunused-variable] 6303 | GENTRY *ge, *nge, *endge, *xge; | ^~~ pt1.c:6684:38: warning: '&&' within '||' [-Wlogical-op-parentheses] 6684 | || physt[first] == physt[last] && j) { | ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~ pt1.c:6684:38: note: place parentheses around the '&&' expression to silence this warning 6684 | || physt[first] == physt[last] && j) { | ^ | ( ) pt1.c:6966:18: warning: variable 'nchars' set but not used [-Wunused-but-set-variable] 6966 | int nchars; | ^ pt1.c:7215:12: warning: unused variable 'n' [-Wunused-variable] 7215 | int i, j, n; | ^ pt1.c:4190:1: warning: unused function 'iiszigzag' [-Wunused-function] 4190 | iiszigzag( | ^~~~~~~~~ pt1.c:1862:1: warning: unused function 'steminblue' [-Wunused-function] 1862 | steminblue( | ^~~~~~~~~~ pt1.c:146:15: warning: unused function 'fcvarea' [-Wunused-function] 146 | static double fcvarea( GENTRY *ge); | ^~~~~~~ pt1.c:2649:1: warning: unused function 'printbasestem' [-Wunused-function] 2649 | printbasestem(void) | ^~~~~~~~~~~~~ 51 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c runt1asm.c In file included from runt1asm.c:60: ./t1asm.c:463:13: warning: unused function 'usage' [-Wunused-function] 463 | static void usage(void) | ^~~~~ ./t1asm.c:476:13: warning: unused function 'print_banner' [-Wunused-function] 476 | static void print_banner(void) | ^~~~~~~~~~~~ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c ttf.c In file included from ttf.c:29: ./global.h:90:30: warning: '/*' within block comment [-Wcomment] 90 | /* #define DBG_GLYPH "C118" /* */ | ^ ttf.c:465:18: warning: variable 'xlast' set but not used [-Wunused-but-set-variable] 465 | double xlast = 0, ylast = 0; | ^ ttf.c:465:29: warning: variable 'ylast' set but not used [-Wunused-but-set-variable] 465 | double xlast = 0, ylast = 0; | ^ ttf.c:1414:6: warning: '&&' within '||' [-Wlogical-op-parentheses] 1413 | || str[j]=='b' | ~~ ~~~~~~~~~~~ 1414 | && ( j==0 || !isalpha(str[j-1]) ) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ttf.c:1414:6: note: place parentheses around the '&&' expression to silence this warning 1413 | || str[j]=='b' | ( 1414 | && ( j==0 || !isalpha(str[j-1]) ) | ^ | ) 4 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c ft.c clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c bdf.c In file included from bdf.c:15: ./global.h:90:30: warning: '/*' within block comment [-Wcomment] 90 | /* #define DBG_GLYPH "C118" /* */ | ^ bdf.c:101:8: warning: unused variable 's' [-Wunused-variable] 101 | char *s; | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -c bitmap.c In file included from bitmap.c:14: ./global.h:90:30: warning: '/*' within block comment [-Wcomment] 90 | /* #define DBG_GLYPH "C118" /* */ | ^ bitmap.c:454:15: warning: '&&' within '||' [-Wlogical-op-parentheses] 454 | && ( outend && f->sublen <= pf->sublen | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 455 | || ( pf->sublen == f->sublen | ~~ bitmap.c:454:15: note: place parentheses around the '&&' expression to silence this warning 454 | && ( outend && f->sublen <= pf->sublen | ^ | ( ) bitmap.c:464:17: warning: '&&' within '||' [-Wlogical-op-parentheses] 464 | && ( outfront && f->sublen <= lf->sublen | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ 465 | || ( lf->sublen == f->sublen | ~~ bitmap.c:464:17: note: place parentheses around the '&&' expression to silence this warning 464 | && ( outfront && f->sublen <= lf->sublen | ^ | ( ) bitmap.c:349:16: warning: variable 'ff' set but not used [-Wunused-but-set-variable] 349 | GEX_FRAG *f, *ff, *lf, *pf, *xf; | ^ bitmap.c:358:9: warning: unused variable 'j' [-Wunused-variable] 358 | int i, j, a1, a2, ndots; | ^ bitmap.c:2305:21: warning: unused variable 'lf' [-Wunused-variable] 2305 | GEX_FRAG *ff, *lf, *xf; | ^~ bitmap.c:2508:18: warning: unused variable 'pf' [-Wunused-variable] 2508 | GEX_FRAG *f, *pf; | ^~ bitmap.c:1033:7: warning: unused variable 'i' [-Wunused-variable] 1033 | int i; | ^ bitmap.c:926:3: warning: unused label 'try1' [-Wunused-label] 926 | try1: | ^~~~~ 9 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -o ttf2pt1 ttf2pt1.o pt1.o runt1asm.o ttf.o ft.o bdf.o bitmap.o -lm make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmps1NjNM/R.INSTALL183b98751b8f87/Rttf2pt1/src/ttf2pt1' make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmps1NjNM/R.INSTALL183b98751b8f87/Rttf2pt1/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rttf2pt1/00new/Rttf2pt1 [1] "" Installing ttf2pt1/ttf2pt1 to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rttf2pt1/00new/Rttf2pt1/exec ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rttf2pt1) begin installing package ‘openssl’ * installing *source* package ‘venn’ ... ** this is package ‘venn’ version ‘1.12’ ** package ‘venn’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (venn) begin installing package ‘futile.logger’ * installing *source* package ‘jsonlite’ ... ** this is package ‘jsonlite’ version ‘1.8.9’ ** package ‘jsonlite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9iTga0/R.INSTALL18582622a30fac/jsonlite/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_array.c -o collapse_array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_object.c -o collapse_object.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c collapse_pretty.c -o collapse_pretty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c escape_chars.c -o escape_chars.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c integer64_to_na.c -o integer64_to_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_datelist.c -o is_datelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_recordlist.c -o is_recordlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c is_scalarlist.c -o is_scalarlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c modp_numtoa.c -o modp_numtoa.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c null_to_na.c -o null_to_na.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c num_to_char.c -o num_to_char.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c parse.c -o parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c prettify.c -o prettify.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c push_parser.c -o push_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c r-base64.c -o r-base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c register.c -o register.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c row_collapse.c -o row_collapse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c transpose_list.c -o transpose_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c validate.c -o validate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl.c -o yajl/yajl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_buf.c -o yajl/yajl_buf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_encode.c -o yajl/yajl_encode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_gen.c -o yajl/yajl_gen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_lex.c -o yajl/yajl_lex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_parser.c -o yajl/yajl_parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -Iyajl/api -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c yajl/yajl_tree.c -o yajl/yajl_tree.o ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9iTga0/R.INSTALL18582622a30fac/jsonlite/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-jsonlite/00new/jsonlite/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘asJSON’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘asJSON’ with signature ‘"ITime"’: no definition for class “ITime” in method for ‘asJSON’ with signature ‘"hms"’: no definition for class “hms” in method for ‘asJSON’ with signature ‘"json"’: no definition for class “json” in method for ‘asJSON’ with signature ‘"integer64"’: no definition for class “integer64” in method for ‘asJSON’ with signature ‘"pairlist"’: no definition for class “pairlist” in method for ‘asJSON’ with signature ‘"blob"’: no definition for class “blob” in method for ‘asJSON’ with signature ‘"scalar"’: no definition for class “scalar” in method for ‘asJSON’ with signature ‘"sf"’: no definition for class “sf” in method for ‘asJSON’ with signature ‘"sfc"’: no definition for class “sfc” in method for ‘asJSON’ with signature ‘"vctrs_vctr"’: no definition for class “vctrs_vctr” ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jsonlite) begin installing package ‘Rdpack’ * installing *source* package ‘foreach’ ... ** this is package ‘foreach’ version ‘1.5.2’ ** package ‘foreach’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (foreach) begin installing package ‘extrafont’ * installing *source* package ‘xfun’ ... ** this is package ‘xfun’ version ‘0.50’ ** package ‘xfun’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpRBBZYt/R.INSTALL185817af16f51/xfun/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o xfun.so base64.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpRBBZYt/R.INSTALL185817af16f51/xfun/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-xfun/00new/xfun/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xfun) begin installing package ‘doParallel’ * installing *source* package ‘GetoptLong’ ... ** this is package ‘GetoptLong’ version ‘1.0.5’ ** package ‘GetoptLong’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GetoptLong) begin installing package ‘highr’ * installing *source* package ‘futile.logger’ ... ** this is package ‘futile.logger’ version ‘1.4.3’ ** package ‘futile.logger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (futile.logger) begin installing package ‘tinytex’ * installing *source* package ‘extrafont’ ... ** this is package ‘extrafont’ version ‘0.19’ ** package ‘extrafont’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (extrafont) * installing *source* package ‘clue’ ... ** this is package ‘clue’ version ‘0.3-66’ ** package ‘clue’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdPPWLM/R.INSTALL1851f830397a83/clue/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c assignment.c -o assignment.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c clue.c -o clue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lsap.c -o lsap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c trees.c -o trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o clue.so assignment.o clue.o init.o lsap.o trees.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdPPWLM/R.INSTALL1851f830397a83/clue/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-clue/00new/clue/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (clue) * installing *source* package ‘highr’ ... ** this is package ‘highr’ version ‘0.11’ ** package ‘highr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (highr) * installing *source* package ‘locfit’ ... ** this is package ‘locfit’ version ‘1.5-9.10’ ** package ‘locfit’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppVFsat/R.INSTALL1843bf254984d5/locfit/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c S_enter.c -o S_enter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c band.c -o band.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c dbinom.c -o dbinom.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c dens_haz.c -o dens_haz.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c dens_int.c -o dens_int.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c dens_odi.c -o dens_odi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c density.c -o density.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c ev_atree.c -o ev_atree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c ev_interp.c -o ev_interp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c ev_kdtre.c -o ev_kdtre.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c ev_main.c -o ev_main.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c ev_sphere.c -o ev_sphere.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c ev_trian.c -o ev_trian.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c family.c -o family.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c fitted.c -o fitted.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c frend.c -o frend.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_adap.c -o lf_adap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_dercor.c -o lf_dercor.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_fitfun.c -o lf_fitfun.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_nbhd.c -o lf_nbhd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_robust.c -o lf_robust.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_vari.c -o lf_vari.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lf_wdiag.c -o lf_wdiag.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c lfstr.c -o lfstr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c locfit.c -o locfit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_chol.c -o m_chol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_eigen.c -o m_eigen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_icirc.c -o m_icirc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_imont.c -o m_imont.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_isimp.c -o m_isimp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_isphr.c -o m_isphr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_jacob.c -o m_jacob.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_max.c -o m_max.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_qr.c -o m_qr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_solve.c -o m_solve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_svd.c -o m_svd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c m_vector.c -o m_vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c math.c -o math.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c minmax.c -o minmax.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c pcomp.c -o pcomp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c preplot.c -o preplot.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c prob.c -o prob.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c procv.c -o procv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c scb.c -o scb.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c scb_cons.c -o scb_cons.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c scb_crit.c -o scb_crit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c scb_iface.c -o scb_iface.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c simul.c -o simul.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c smisc.c -o smisc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c startlf.c -o startlf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-strict-prototypes -c weight.c -o weight.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -std=gnu17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o locfit.so S_enter.o band.o dbinom.o dens_haz.o dens_int.o dens_odi.o density.o ev_atree.o ev_interp.o ev_kdtre.o ev_main.o ev_sphere.o ev_trian.o family.o fitted.o frend.o lf_adap.o lf_dercor.o lf_fitfun.o lf_nbhd.o lf_robust.o lf_vari.o lf_wdiag.o lfstr.o locfit.o m_chol.o m_eigen.o m_icirc.o m_imont.o m_isimp.o m_isphr.o m_jacob.o m_max.o m_qr.o m_solve.o m_svd.o m_vector.o math.o minmax.o pcomp.o preplot.o prob.o procv.o scb.o scb_cons.o scb_crit.o scb_iface.o simul.o smisc.o startlf.o weight.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppVFsat/R.INSTALL1843bf254984d5/locfit/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-locfit/00new/locfit/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (locfit) * installing *source* package ‘doParallel’ ... ** this is package ‘doParallel’ version ‘1.0.17’ ** package ‘doParallel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (doParallel) * installing *source* package ‘checkmate’ ... ** this is package ‘checkmate’ version ‘2.3.2’ ** package ‘checkmate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFxpAo2/R.INSTALL185e202b71d9e7/checkmate/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c all_missing.c -o all_missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_infinite.c -o any_infinite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_missing.c -o any_missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c any_nan.c -o any_nan.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c checks.c -o checks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c find_nchar.c -o find_nchar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c guess_type.c -o guess_type.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c helper.c -o helper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integerish.c -o integerish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c is_sorted.c -o is_sorted.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c qassert.c -o qassert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c which_first.c -o which_first.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o checkmate.so all_missing.o any_infinite.o any_missing.o any_nan.o checks.o find_nchar.o guess_type.o helper.o init.o integerish.o is_sorted.o qassert.o which_first.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFxpAo2/R.INSTALL185e202b71d9e7/checkmate/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-checkmate/00new/checkmate/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (checkmate) * installing *source* package ‘cli’ ... ** this is package ‘cli’ version ‘3.6.3’ ** package ‘cli’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpu0kGTM/R.INSTALL184071280e8995/cli/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c ansi.c -o ansi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c diff.c -o diff.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c errors.c -o errors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c glue.c -o glue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c inst.c -o inst.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c keypress-unix.c -o keypress-unix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c keypress-win.c -o keypress-win.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c keypress.c -o keypress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c progress-altrep.c -o progress-altrep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c progress.c -o progress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c sha1.c -o sha1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c sha256.c -o sha256.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c thread.c -o thread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c tty.c -o tty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c utf8.c -o utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c vt.c -o vt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c vtparse.c -o vtparse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c vtparse_table.c -o vtparse_table.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c win-utf8.c -o win-utf8.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -I../inst/include -fpic -g -O3 -Wall -pedantic -c winfiles.c -o winfiles.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o cli.so ansi.o cleancall.o diff.o errors.o glue.o init.o inst.o keypress-unix.o keypress-win.o keypress.o md5.o progress-altrep.o progress.o sha1.o sha256.o thread.o tty.o utf8.o utils.o vt.o vtparse.o vtparse_table.o win-utf8.o winfiles.o -lpthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpu0kGTM/R.INSTALL184071280e8995/cli/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-cli/00new/cli/libs ** R ** exec ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cli) * installing *source* package ‘colorspace’ ... ** this is package ‘colorspace’ version ‘2.1-1’ ** package ‘colorspace’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpopiGMi/R.INSTALL184e2177b1948a/colorspace/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colorspace.c -o colorspace.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o colorspace.so colorspace.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpopiGMi/R.INSTALL184e2177b1948a/colorspace/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-colorspace/00new/colorspace/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (colorspace) begin installing package ‘munsell’ begin installing package ‘circlize’ * installing *source* package ‘digest’ ... ** this is package ‘digest’ version ‘0.6.37’ ** package ‘digest’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpgJA2V0/R.INSTALL185446d90cda7/digest/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SpookyV2.cpp -o SpookyV2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aes.c -o aes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3.c -o blake3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3_dispatch.c -o blake3_dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c blake3_portable.c -o blake3_portable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c crc32.c -o crc32.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c crc32c.cpp -o crc32c.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c crc32c_portable.cpp -o crc32c_portable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c digest.c -o digest.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c digest2int.c -o digest2int.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c md5.c -o md5.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pmurhash.c -o pmurhash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c raes.c -o raes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha1.c -o sha1.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha2.c -o sha2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sha256.c -o sha256.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c spooky_serialize.cpp -o spooky_serialize.o spooky_serialize.cpp:25:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 25 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xxhash.c -o xxhash.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o crc32c.o crc32c_portable.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpgJA2V0/R.INSTALL185446d90cda7/digest/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-digest/00new/digest/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (digest) * installing *source* package ‘matrixStats’ ... ** this is package ‘matrixStats’ version ‘1.5.0’ ** package ‘matrixStats’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpO4TnG7/R.INSTALL1842ac398d4ec2/matrixStats/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c 000.init.c -o 000.init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c allocMatrix2.c -o allocMatrix2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c anyMissing.c -o anyMissing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c binCounts.c -o binCounts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c binMeans.c -o binMeans.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colCounts.c -o colCounts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colOrderStats.c -o colOrderStats.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c colRanges.c -o colRanges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diff2.c -o diff2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c indexByRow.c -o indexByRow.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c logSumExp.c -o logSumExp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mean2.c -o mean2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c naming.c -o naming.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c productExpSumLog.c -o productExpSumLog.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c psortKM.c -o psortKM.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCounts.c -o rowCounts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCummaxs.c -o rowCummaxs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCummins.c -o rowCummins.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCumprods.c -o rowCumprods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowCumsums.c -o rowCumsums.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowDiffs.c -o rowDiffs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowLogSumExp.c -o rowLogSumExp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMads.c -o rowMads.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMeans2.c -o rowMeans2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMedians.c -o rowMedians.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowOrderStats.c -o rowOrderStats.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowRanges.c -o rowRanges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowRanksWithTies.c -o rowRanksWithTies.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowSums2.c -o rowSums2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowVars.c -o rowVars.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c signTabulate.c -o signTabulate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sum2.c -o sum2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c validateIndices.c -o validateIndices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weightedMean.c -o weightedMean.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weightedMedian.c -o weightedMedian.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c x_OP_y.c -o x_OP_y.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o matrixStats.so 000.init.o allocMatrix2.o anyMissing.o binCounts.o binMeans.o colCounts.o colOrderStats.o colRanges.o diff2.o indexByRow.o logSumExp.o mean2.o naming.o productExpSumLog.o psortKM.o rowCounts.o rowCummaxs.o rowCummins.o rowCumprods.o rowCumsums.o rowDiffs.o rowLogSumExp.o rowMads.o rowMeans2.o rowMedians.o rowOrderStats.o rowRanges.o rowRanksWithTies.o rowSums2.o rowVars.o signTabulate.o sum2.o validateIndices.o weightedMean.o weightedMedian.o x_OP_y.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpO4TnG7/R.INSTALL1842ac398d4ec2/matrixStats/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-matrixStats/00new/matrixStats/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (matrixStats) begin installing package ‘MatrixGenerics’ * installing *source* package ‘openssl’ ... ** this is package ‘openssl’ version ‘2.3.2’ ** package ‘openssl’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS= Using PKG_LIBS=-l:libssl.so.3 -l:libcrypto.so.3 ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpgZmOCM/R.INSTALL1862d425036e92/openssl/src' rm -f aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o openssl.so bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c aes.c -o aes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c base64.c -o base64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bignum.c -o bignum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cert.c -o cert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compatibility.c -o compatibility.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c diffie.c -o diffie.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c envelope.c -o envelope.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c error.c -o error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c info.c -o info.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c keygen.c -o keygen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c keys.c -o keys.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c onload.c -o onload.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c openssh.c -o openssh.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c password.c -o password.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pbkdf.c -o pbkdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pem.c -o pem.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pkcs12.c -o pkcs12.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pkcs7.c -o pkcs7.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rand.c -o rand.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rsa.c -o rsa.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c signing.c -o signing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ssl.c -o ssl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c stream.c -o stream.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c write.c -o write.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c x25519.c -o x25519.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bcrypt/bcrypt_pbkdf.c -o bcrypt/bcrypt_pbkdf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DOPENSSL_SUPPRESS_DEPRECATED -DSTRICT_R_HEADERS -DR_NO_REMAP -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bcrypt/blowfish.c -o bcrypt/blowfish.o ar rcs bcrypt/libstatbcrypt.a bcrypt/bcrypt_pbkdf.o bcrypt/blowfish.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o openssl.so aes.o base64.o bignum.o cert.o compatibility.o diffie.o envelope.o error.o hash.o info.o keygen.o keys.o onload.o openssh.o password.o pbkdf.o pem.o pkcs12.o pkcs7.o rand.o rsa.o signing.o ssl.o stream.o write.o x25519.o -Lbcrypt -lstatbcrypt -l:libssl.so.3 -l:libcrypto.so.3 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpgZmOCM/R.INSTALL1862d425036e92/openssl/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-openssl/00new/openssl/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (openssl) begin installing package ‘httr’ * installing *source* package ‘XML’ ... ** this is package ‘XML’ version ‘3.99-0.18’ ** package ‘XML’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C... yes checking whether clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer accepts -g... yes checking for clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer option to enable C11 features... none needed checking how to run the C preprocessor... clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -E checking for sed... /usr/bin/sed checking for pkg-config... /usr/bin/pkg-config checking for xml2-config... /usr/bin/xml2-config USE_XML2 = yes SED_EXTENDED_ARG: -E Minor 9, Patch 14 for 2.9.14 Located parser file -I/usr/include/libxml2/parser.h Checking for 1.8: -I/usr/include/libxml2 Using libxml2.* checking for gzopen in -lz... yes checking for xmlParseFile in -lxml2... yes checking for xmlHashSize in -lxml2... yes Using built-in xmlHashSize Checking DTD parsing (presence of externalSubset)... checking for xmlHashSize in -lxml2... (cached) yes Found xmlHashSize checking for xmlOutputBufferCreateBuffer in -lxml2... yes have xmlOutputBufferCreateBuffer() checking for xmlDocDumpFormatMemoryEnc in -lxml2... yes checking for libxml/xmlversion.h... yes Expat: FALSE Checking for return type of xmlHashScan element routine. No return value for xmlHashScan xmlNs has a context field Checking for cetype_t enumeration Using recent version of R with cetype_t enumeration type for encoding checking for xmlsec1-config... no nodegc default xml-debug default Version has XML_WITH_ZLIB Version has xmlHasFeature() **************************************** Configuration information: Libxml settings libxml include directory: -I/usr/include/libxml2 libxml library directory: -lxml2 -lz -lxml2 libxml 2: -DLIBXML2=1 Compilation flags: -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 Link flags: -lxml2 -lz -lxml2 **************************************** configure: creating ./config.status config.status: creating src/Makevars config.status: creating R/supports.R config.status: creating inst/scripts/RSXML.csh config.status: creating inst/scripts/RSXML.bsh ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpaHIEZd/R.INSTALL182e036d70bb8/XML/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c DocParse.c -o DocParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c EventParse.c -o EventParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ExpatParse.c -o ExpatParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c HTMLParse.c -o HTMLParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NodeGC.c -o NodeGC.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RSDTD.c -o RSDTD.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RUtils.c -o RUtils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rcatalog.c -o Rcatalog.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Utils.c -o Utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLEventParse.c -o XMLEventParse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLHashTree.c -o XMLHashTree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XMLTree.c -o XMLTree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fixNS.c -o fixNS.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c libxmlFeatures.c -o libxmlFeatures.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c schema.c -o schema.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xmlsecurity.c -o xmlsecurity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DLIBXML -I/usr/include/libxml2 -DUSE_EXTERNAL_SUBSET=1 -DROOT_HAS_DTD_NODE=1 -DDUMP_WITH_ENCODING=1 -DUSE_XML_VERSION_H=1 -DXML_ELEMENT_ETYPE=1 -DXML_ATTRIBUTE_ATYPE=1 -DNO_XML_HASH_SCANNER_RETURN=1 -DLIBXML_NAMESPACE_HAS_CONTEXT=1 -DHAVE_R_CETYPE_T=1 -DHAVE_XML_WITH_ZLIB=1 -DHAVE_XML_HAS_FEATURE=1 -DUSE_R=1 -D_R_=1 -DHAVE_VALIDITY=1 -DXML_REF_COUNT_NODES=1 -I. -DLIBXML2=1 -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xpath.c -o xpath.o xpath.c:255:15: warning: assigning to 'xmlXPathFunction' (aka 'void (*)(struct _xmlXPathParserContext *, int)') from 'void *' converts between void pointer and function pointer [-Wpedantic] 255 | routine = R_ExternalPtrAddr(el); | ^ ~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o XML.so DocParse.o EventParse.o ExpatParse.o HTMLParse.o NodeGC.o RSDTD.o RUtils.o Rcatalog.o Utils.o XMLEventParse.o XMLHashTree.o XMLTree.o fixNS.o libxmlFeatures.o schema.o xmlsecurity.o xpath.o -lxml2 -lz -lxml2 -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpaHIEZd/R.INSTALL182e036d70bb8/XML/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-XML/00new/XML/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘source’ from package ‘base’ in package ‘XML’ in method for ‘xmlAttrsToDataFrame’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘readKeyValueDB’ with signature ‘"AsIs"’: no definition for class “AsIs” in method for ‘readSolrDoc’ with signature ‘"AsIs"’: no definition for class “AsIs” ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XML) * installing *source* package ‘tinytex’ ... ** this is package ‘tinytex’ version ‘0.54’ ** package ‘tinytex’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinytex) * installing *source* package ‘Rdpack’ ... ** this is package ‘Rdpack’ version ‘2.6.2’ ** package ‘Rdpack’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rdpack) begin installing package ‘reformulas’ * installing *source* package ‘bit64’ ... ** this is package ‘bit64’ version ‘4.6.0-1’ ** package ‘bit64’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5oAOs7/R.INSTALL185b967f2c5280/bit64/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsearch.c -o bsearch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cache.c -o cache.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash64.c -o hash64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integer64.c -o integer64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort64.c -o sort64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sortuse64.c -o sortuse64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o bit64.so bsearch.o cache.o hash64.o init.o integer64.o sort64.o sortuse64.o -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5oAOs7/R.INSTALL185b967f2c5280/bit64/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-bit64/00new/bit64/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bit64) * installing *source* package ‘yaml’ ... ** this is package ‘yaml’ version ‘2.3.10’ ** package ‘yaml’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpBkrCVh/R.INSTALL1858197106b996/yaml/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c api.c -o api.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dumper.c -o dumper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c emitter.c -o emitter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c implicit.c -o implicit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loader.c -o loader.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c parser.c -o parser.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_emit.c -o r_emit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_ext.c -o r_ext.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c r_parse.c -o r_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reader.c -o reader.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c scanner.c -o scanner.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c writer.c -o writer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o yaml.so api.o dumper.o emitter.o implicit.o loader.o parser.o r_emit.o r_ext.o r_parse.o reader.o scanner.o writer.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpBkrCVh/R.INSTALL1858197106b996/yaml/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-yaml/00new/yaml/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yaml) begin installing package ‘knitr’ * installing *source* package ‘munsell’ ... ** this is package ‘munsell’ version ‘0.5.1’ ** package ‘munsell’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (munsell) * installing *source* package ‘fs’ ... ** this is package ‘fs’ version ‘1.6.5’ ** package ‘fs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphvHiaT/R.INSTALL183b0147c70d8d/fs/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c dir.cc -o dir.o In file included from dir.cc:6: ./getmode.h:3:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 3 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c error.cc -o error.o In file included from error.cc:1: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c file.cc -o file.o In file included from file.cc:10: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fs.cc -o fs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c getmode.cc -o getmode.o In file included from getmode.cc:1: ./getmode.h:3:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 3 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c id.cc -o id.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cc -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c link.cc -o link.o In file included from link.cc:6: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c path.cc -o path.o In file included from path.cc:9: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c utils.cc -o utils.o In file included from utils.cc:6: ./error.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c unix/getmode.cc -o unix/getmode.o In file included from unix/getmode.cc:1: ./getmode.h:3:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 3 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/setmode.c -o bsd/setmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/strmode.c -o bsd/strmode.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libuv-1.44.2/include -I. -pthread -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bsd/reallocarray.c -o bsd/reallocarray.o touch libuv-1.44.2/aclocal.m4 && touch libuv-1.44.2/configure && touch libuv-1.44.2/Makefile.in (cd libuv-1.44.2 \ && CC="clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer" CPPFLAGS="-I/usr/local/include" CFLAGS="-g -O3 -Wall -pedantic -fpic -fvisibility=hidden -std=c99" AR="ar" RANLIB="ranlib" LDFLAGS="-Wl,-O1" ./configure --quiet) make --directory=libuv-1.44.2 \ HAVE_DTRACE=0 make[2]: Entering directory '/home/hornik/tmp/scratch/RtmphvHiaT/R.INSTALL183b0147c70d8d/fs/src/libuv-1.44.2' CC src/libuv_la-fs-poll.lo CC src/libuv_la-idna.lo CC src/libuv_la-inet.lo CC src/libuv_la-random.lo CC src/libuv_la-strscpy.lo CC src/libuv_la-threadpool.lo CC src/libuv_la-timer.lo CC src/libuv_la-uv-data-getter-setters.lo CC src/libuv_la-uv-common.lo CC src/libuv_la-version.lo CC src/libuv_la-strtok.lo CC src/unix/libuv_la-async.lo CC src/unix/libuv_la-core.lo CC src/unix/libuv_la-dl.lo CC src/unix/libuv_la-fs.lo CC src/unix/libuv_la-getaddrinfo.lo CC src/unix/libuv_la-getnameinfo.lo CC src/unix/libuv_la-loop-watcher.lo CC src/unix/libuv_la-loop.lo CC src/unix/libuv_la-pipe.lo CC src/unix/libuv_la-poll.lo CC src/unix/libuv_la-process.lo CC src/unix/libuv_la-random-devurandom.lo CC src/unix/libuv_la-signal.lo CC src/unix/libuv_la-stream.lo CC src/unix/libuv_la-tcp.lo CC src/unix/libuv_la-thread.lo CC src/unix/libuv_la-tty.lo CC src/unix/libuv_la-udp.lo CC src/unix/libuv_la-linux-core.lo CC src/unix/libuv_la-linux-inotify.lo CC src/unix/libuv_la-linux-syscalls.lo CC src/unix/libuv_la-procfs-exepath.lo CC src/unix/libuv_la-proctitle.lo CC src/unix/libuv_la-random-getrandom.lo CC src/unix/libuv_la-random-sysctl-linux.lo CC src/unix/libuv_la-epoll.lo CCLD libuv.la make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmphvHiaT/R.INSTALL183b0147c70d8d/fs/src/libuv-1.44.2' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o fs.so dir.o error.o file.o fs.o getmode.o id.o init.o link.o path.o utils.o unix/getmode.o bsd/setmode.o bsd/strmode.o bsd/reallocarray.o ./libuv-1.44.2/.libs/libuv.a -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphvHiaT/R.INSTALL183b0147c70d8d/fs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-fs/00new/fs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fs) * installing *source* package ‘Biobase’ ... ** this is package ‘Biobase’ version ‘2.66.0’ ** package ‘Biobase’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptqdWek/R.INSTALL185f35248343a7/Biobase/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rinit.c -o Rinit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c anyMissing.c -o anyMissing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c envir.c -o envir.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c matchpt.c -o matchpt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowMedians.c -o rowMedians.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sublist_extract.c -o sublist_extract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Biobase.so Rinit.o anyMissing.o envir.o matchpt.o rowMedians.o sublist_extract.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptqdWek/R.INSTALL185f35248343a7/Biobase/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Biobase/00new/Biobase/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Biobase) * installing *source* package ‘MatrixGenerics’ ... ** this is package ‘MatrixGenerics’ version ‘1.18.1’ ** package ‘MatrixGenerics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘rowAlls’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAlls’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowAnyNAs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAnyNAs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowAnys’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAnys’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowAvgsPerColSet’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colAvgsPerRowSet’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCollapse’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCollapse’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCounts’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCounts’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCummaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCummaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCummins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCummins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCumprods’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCumprods’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowCumsums’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colCumsums’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowIQRDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colIQRDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowIQRs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colIQRs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowLogSumExps’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colLogSumExps’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMadDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMadDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMaxs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMeans2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMeans2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowMins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colMins’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowOrderStats’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colOrderStats’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowProds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colProds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowQuantiles’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colQuantiles’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowRanges’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colRanges’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowRanks’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colRanks’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowSdDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colSdDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowSums2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colSums2’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowTabulates’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colTabulates’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowVarDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colVarDiffs’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowVars’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colVars’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedMads’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedMeans’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedMeans’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedMedians’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedSds’ in package ‘MatrixGenerics’ Creating a new generic function for ‘rowWeightedVars’ in package ‘MatrixGenerics’ Creating a new generic function for ‘colWeightedVars’ in package ‘MatrixGenerics’ ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MatrixGenerics) * installing *source* package ‘httr’ ... ** this is package ‘httr’ version ‘1.4.7’ ** package ‘httr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (httr) * installing *source* package ‘timechange’ ... ** this is package ‘timechange’ version ‘0.3.0’ ** package ‘timechange’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4QHkom/R.INSTALL185e644b4dd4d5/timechange/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c common.cpp -o common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c get.cpp -o get.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c parse.c -o parse.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c round.cpp -o round.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c tzone.cpp -o tzone.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c update.cpp -o update.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_fixed.cc -o cctz/src/time_zone_fixed.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_if.cc -o cctz/src/time_zone_if.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_impl.cc -o cctz/src/time_zone_impl.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_info.cc -o cctz/src/time_zone_info.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_libc.cc -o cctz/src/time_zone_libc.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_lookup.cc -o cctz/src/time_zone_lookup.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/time_zone_posix.cc -o cctz/src/time_zone_posix.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -I./cctz/src/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cctz/src/zone_info_source.cc -o cctz/src/zone_info_source.o ar rcs libcctz.a ./cctz/src/time_zone_fixed.o ./cctz/src/time_zone_if.o ./cctz/src/time_zone_impl.o ./cctz/src/time_zone_info.o ./cctz/src/time_zone_libc.o ./cctz/src/time_zone_lookup.o ./cctz/src/time_zone_posix.o ./cctz/src/zone_info_source.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o timechange.so common.o cpp11.o get.o parse.o round.o tzone.o update.o -L. -lcctz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4QHkom/R.INSTALL185e644b4dd4d5/timechange/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-timechange/00new/timechange/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (timechange) begin installing package ‘lubridate’ * installing *source* package ‘Rcpp’ ... ** this is package ‘Rcpp’ version ‘1.0.14’ ** package ‘Rcpp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpk0f2om/R.INSTALL1843cb7cc56163/Rcpp/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c api.cpp -o api.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c attributes.cpp -o attributes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c barrier.cpp -o barrier.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c date.cpp -o date.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c module.cpp -o module.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c rcpp_init.cpp -o rcpp_init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpk0f2om/R.INSTALL1843cb7cc56163/Rcpp/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Rcpp/00new/Rcpp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rcpp) begin installing package ‘minqa’ begin installing package ‘RcppEigen’ begin installing package ‘RcppArmadillo’ begin installing package ‘ape’ * installing *source* package ‘reformulas’ ... ** this is package ‘reformulas’ version ‘0.4.0’ ** package ‘reformulas’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reformulas) * installing *source* package ‘rlang’ ... ** this is package ‘rlang’ version ‘1.1.5’ ** package ‘rlang’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjyWxzQ/R.INSTALL185a7e36ac5e0c/rlang/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c capture.c -o capture.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c internal.c -o internal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang.c -o rlang.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o rlang.so capture.o internal.o rlang.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjyWxzQ/R.INSTALL185a7e36ac5e0c/rlang/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-rlang/00new/rlang/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rlang) begin installing package ‘later’ begin installing package ‘cachem’ begin installing package ‘lifecycle’ begin installing package ‘yulab.utils’ begin installing package ‘htmltools’ * installing *source* package ‘farver’ ... ** this is package ‘farver’ version ‘2.1.2’ ** package ‘farver’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWFhwOK/R.INSTALL1837754351c4d2/farver/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ColorSpace.cpp -o ColorSpace.o ColorSpace.cpp:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c Comparison.cpp -o Comparison.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c Conversion.cpp -o Conversion.o Conversion.cpp:8:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 8 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c encode.cpp -o encode.o In file included from encode.cpp:1: ./encode.h:8:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 8 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c farver.cpp -o farver.o In file included from farver.cpp:1: ./farver.h:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:1: ./farver.h:6:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 6 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWFhwOK/R.INSTALL1837754351c4d2/farver/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-farver/00new/farver/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (farver) * installing *source* package ‘BH’ ... ** this is package ‘BH’ version ‘1.87.0-1’ ** package ‘BH’ successfully unpacked and MD5 sums checked ** using staged installation ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BH) begin installing package ‘BiocParallel’ * installing *source* package ‘quantreg’ ... ** this is package ‘quantreg’ version ‘6.00’ ** package ‘quantreg’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPEigS0/R.INSTALL185cea73274b6a/quantreg/src' flang-new-19 -fpic -g -O2 -c akj.f -o akj.o flang-new-19 -fpic -g -O2 -c boot.f -o boot.o flang-new-19 -fpic -g -O2 -c bound.f -o bound.o flang-new-19 -fpic -g -O2 -c boundc.f -o boundc.o flang-new-19 -fpic -g -O2 -c brute.f -o brute.o flang-new-19 -fpic -g -O2 -c chlfct.f -o chlfct.o flang-new-19 -fpic -g -O2 -c cholesky.f -o cholesky.o ./cholesky.f:65:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:724:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:815:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:903:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:929:17: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:2561:7: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3746:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:3934:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4221:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ ./cholesky.f:4754:9: warning: Unrecognized compiler directive was ignored CDIR$ IVDEP ^^^^^^ flang-new-19 -fpic -g -O2 -c combos.f -o combos.o flang-new-19 -fpic -g -O2 -c crqf.f -o crqf.o flang-new-19 -fpic -g -O2 -c crqfnb.f -o crqfnb.o ./crqfnb.f:29:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(n,y,1,d,1) ^^^^^^^^^^^^^^^^^^^^^ ./crqfnb.f:28:7: previous reference to 'dcopy' call dcopy(p,wp,1,b(1,k-1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./crqfnb.f:30:7: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #7: incompatible dummy data object shapes call dgemv('N',n,p,one,x,n,b(1,k-1),1,one,d,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./crqfnb.f:23:7: previous reference to 'dgemv' call dgemv('T',n,p,one,x,n,d,1,zero,r,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c dsel05.f -o dsel05.o flang-new-19 -fpic -g -O2 -c extract.f -o extract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c frand.c -o frand.o flang-new-19 -fpic -g -O2 -c grexp.f -o grexp.o flang-new-19 -fpic -g -O2 -c idmin.f -o idmin.o flang-new-19 -fpic -g -O2 -c iswap.f -o iswap.o flang-new-19 -fpic -g -O2 -c kuantile.f -o kuantile.o flang-new-19 -fpic -g -O2 -c kuantiles.f -o kuantiles.o flang-new-19 -fpic -g -O2 -c linpack.f -o linpack.o ./linpack.f:230:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:263:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:272:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:280:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:294:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:299:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:308:13: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./linpack.f:318:7: warning: Reference to the procedure 'dscal' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dscal(n,s,z,1) ^^^^^^^^^^^^^^^^^^^ ./linpack.f:98:13: previous reference to 'dscal' call dscal(k-1,t,a(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mcmb.c -o mcmb.o mcmb.c:175:16: warning: variable 'mm' set but not used [-Wunused-but-set-variable] 175 | unsigned int mm; | ^ mcmb.c:176:32: warning: variable 'large' set but not used [-Wunused-but-set-variable] 176 | double taustar, pwtsum, ans, large; | ^ 2 warnings generated. flang-new-19 -fpic -g -O2 -c penalty.f -o penalty.o flang-new-19 -fpic -g -O2 -c pfnb.f -o pfnb.o ./pfnb.f:76:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,glob,1,aa(1,k+1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:77:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,ghib,1,aa(1,k+2),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:84:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,wp,1,b(1,iq),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:85:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(n,y,1,r,1) ^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:57:7: previous reference to 'dcopy' call dcopy(p,a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:86:7: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #7: incompatible dummy data object shapes call dgemv('T',p,n,one,a,p,b(1,iq),1,one,r,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pfnb.f:80:7: previous reference to 'dgemv' call dgemv('N',p,k+2,one-tau,aa,p,d,1,zero,rhs,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c powell.f -o powell.o ./powell.f:67:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call daxpy(p,step,d,1,xh,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:58:7: previous reference to 'daxpy' call daxpy(p,one,u(1,k),1,d,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:103:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,a(hin,1),n,v,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:65:7: previous reference to 'dcopy' call dcopy(p,x,1,xh,1) ^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:105:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,b(1,k),1,v,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./powell.f:65:7: previous reference to 'dcopy' call dcopy(p,x,1,xh,1) ^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c profnb.f -o profnb.o flang-new-19 -fpic -g -O2 -c pwxy.f -o pwxy.o ./pwxy.f:50:7: warning: Reference to the procedure 'dphil' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call dphil(p,zero,aa(1,k)) ^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:42:7: previous reference to 'dphil' call dphil(p,zero,glob) ^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:76:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call daxpy(k+2,one-tau,u,1,wn,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:51:7: previous reference to 'daxpy' call daxpy(p,w(i),a(1,i),1,aa(1,k),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:78:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,wp,1,b(1,ir),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:70:7: previous reference to 'dcopy' call dcopy(p,glob,1,aa(1,k+1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:79:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #4: incompatible dummy data object shapes call dcopy(n,y,1,u,1) ^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:70:7: previous reference to 'dcopy' call dcopy(p,glob,1,aa(1,k+1),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:80:7: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #7: incompatible dummy data object shapes call dgemv('T',p,n,one,a,p,b(1,ir),1,one,u,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./pwxy.f:74:7: previous reference to 'dgemv' call dgemv('N',p,k+2,one-tau,aa,p,d,1,zero,rhs,1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c qfnb.f -o qfnb.o flang-new-19 -fpic -g -O2 -c qselect.f -o qselect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c quantreg_init.c -o quantreg_init.o flang-new-19 -fpic -g -O2 -c rls.f -o rls.o ./rls.f:14:7: warning: Reference to the procedure 'daxpy' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call daxpy(p,r,ax,1,b(1,i),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ ./rls.f:13:7: previous reference to 'daxpy' call daxpy(p,one,b(1,i-1),1,b(1,i),1) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c rq0.f -o rq0.o flang-new-19 -fpic -g -O2 -c rq1.f -o rq1.o flang-new-19 -fpic -g -O2 -c rqbr.f -o rqbr.o flang-new-19 -fpic -g -O2 -c rqfn.f -o rqfn.o ./rqfn.f:48:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(n,c,1,s,1) ^^^^^^^^^^^^^^^^^^^^^ ./rqfn.f:47:7: previous reference to 'dcopy' call dcopy(pp,ada,1,aa,1) ^^^^^^^^^^^^^^^^^^^^^^^^^ ./rqfn.f:76:7: warning: Reference to the procedure 'dcopy' has an implicit interface that is distinct from another reference: incompatible dummy argument #2: incompatible dummy data object shapes call dcopy(p,dy,1,rhs,1) ^^^^^^^^^^^^^^^^^^^^^^^^ ./rqfn.f:47:7: previous reference to 'dcopy' call dcopy(pp,ada,1,aa,1) ^^^^^^^^^^^^^^^^^^^^^^^^^ flang-new-19 -fpic -g -O2 -c rqfnb.f -o rqfnb.o flang-new-19 -fpic -g -O2 -c rqfnc.f -o rqfnc.o flang-new-19 -fpic -g -O2 -c rqs.f -o rqs.o flang-new-19 -fpic -g -O2 -c sakj.f -o sakj.o flang-new-19 -fpic -g -O2 -c sparskit2.f -o sparskit2.o flang-new-19 -fpic -g -O2 -c srqfn.f -o srqfn.o flang-new-19 -fpic -g -O2 -c srqfnc.f -o srqfnc.o flang-new-19 -fpic -g -O2 -c srtpai.f -o srtpai.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o quantreg.so akj.o boot.o bound.o boundc.o brute.o chlfct.o cholesky.o combos.o crqf.o crqfnb.o dsel05.o extract.o frand.o grexp.o idmin.o iswap.o kuantile.o kuantiles.o linpack.o mcmb.o penalty.o pfnb.o powell.o profnb.o pwxy.o qfnb.o qselect.o quantreg_init.o rls.o rq0.o rq1.o rqbr.o rqfn.o rqfnb.o rqfnc.o rqs.o sakj.o sparskit2.o srqfn.o srqfnc.o srtpai.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPEigS0/R.INSTALL185cea73274b6a/quantreg/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-quantreg/00new/quantreg/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quantreg) * installing *source* package ‘lifecycle’ ... ** this is package ‘lifecycle’ version ‘1.0.4’ ** package ‘lifecycle’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lifecycle) begin installing package ‘vctrs’ begin installing package ‘gtable’ begin installing package ‘scales’ begin installing package ‘systemfonts’ * installing *source* package ‘yulab.utils’ ... ** this is package ‘yulab.utils’ version ‘0.2.0’ ** package ‘yulab.utils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (yulab.utils) * installing *source* package ‘knitr’ ... ** this is package ‘knitr’ version ‘1.49’ ** package ‘knitr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (knitr) * installing *source* package ‘cachem’ ... ** this is package ‘cachem’ version ‘1.1.0’ ** package ‘cachem’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpNKb8E3/R.INSTALL1870a227cd85ad/cachem/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c cache.c -o cache.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o cachem.so cache.o init.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpNKb8E3/R.INSTALL1870a227cd85ad/cachem/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-cachem/00new/cachem/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cachem) begin installing package ‘memoise’ * installing *source* package ‘minqa’ ... ** this is package ‘minqa’ version ‘1.2.8’ ** package ‘minqa’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpSqw2di/R.INSTALL186fb7675a2416/minqa/src' flang-new-19 -fpic -g -O2 -c altmov.f -o altmov.o flang-new-19 -fpic -g -O2 -c bigden.f -o bigden.o flang-new-19 -fpic -g -O2 -c biglag.f -o biglag.o flang-new-19 -fpic -g -O2 -c bobyqa.f -o bobyqa.o flang-new-19 -fpic -g -O2 -c bobyqb.f -o bobyqb.o flang-new-19 -fpic -g -O2 -c lagmax.f -o lagmax.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c minqa.cpp -o minqa.o flang-new-19 -fpic -g -O2 -c newuoa.f -o newuoa.o flang-new-19 -fpic -g -O2 -c newuob.f -o newuob.o flang-new-19 -fpic -g -O2 -c prelim.f -o prelim.o flang-new-19 -fpic -g -O2 -c rescue.f -o rescue.o flang-new-19 -fpic -g -O2 -c trsapp.f -o trsapp.o flang-new-19 -fpic -g -O2 -c trsbox.f -o trsbox.o flang-new-19 -fpic -g -O2 -c trstep.f -o trstep.o flang-new-19 -fpic -g -O2 -c uobyqa.f -o uobyqa.o flang-new-19 -fpic -g -O2 -c uobyqb.f -o uobyqb.o flang-new-19 -fpic -g -O2 -c update.f -o update.o flang-new-19 -fpic -g -O2 -c updatebobyqa.f -o updatebobyqa.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o minqa.so altmov.o bigden.o biglag.o bobyqa.o bobyqb.o lagmax.o minqa.o newuoa.o newuob.o prelim.o rescue.o trsapp.o trsbox.o trstep.o uobyqa.o uobyqb.o update.o updatebobyqa.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpSqw2di/R.INSTALL186fb7675a2416/minqa/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-minqa/00new/minqa/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (minqa) * installing *source* package ‘circlize’ ... ** this is package ‘circlize’ version ‘0.4.16’ ** package ‘circlize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (circlize) * installing *source* package ‘memoise’ ... ** this is package ‘memoise’ version ‘2.0.1’ ** package ‘memoise’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (memoise) * installing *source* package ‘htmltools’ ... ** this is package ‘htmltools’ version ‘0.5.8.1’ ** package ‘htmltools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp5iEwTF/R.INSTALL1870ab4b3dd679/htmltools/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c template.c -o template.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o htmltools.so init.o template.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp5iEwTF/R.INSTALL1870ab4b3dd679/htmltools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-htmltools/00new/htmltools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmltools) begin installing package ‘crosstalk’ begin installing package ‘sass’ begin installing package ‘fontawesome’ begin installing package ‘jquerylib’ * installing *source* package ‘gtable’ ... ** this is package ‘gtable’ version ‘0.3.6’ ** package ‘gtable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gtable) begin installing package ‘gridExtra’ * installing *source* package ‘jquerylib’ ... ** this is package ‘jquerylib’ version ‘0.1.4’ ** package ‘jquerylib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (jquerylib) * installing *source* package ‘limma’ ... ** this is package ‘limma’ version ‘3.62.2’ ** package ‘limma’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpmDndbp/R.INSTALL18626b2bd8782b/limma/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c normexp.c -o normexp.o normexp.c:18:8: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 18 | void ex(){} | ^ | void normexp.c:154:10: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 154 | void ex(); | ^ | void normexp.c:166:78: warning: passing 'void (*)()' to parameter of type 'void *' converts between void pointer and function pointer [-Wpedantic] 166 | nmmin(3, par, parsOut, Fmin, normexp_m2loglik_saddle, fail, abstol, intol, &ex, alpha, beta, gamma, trace, fncount, maxit); | ^~~ /home/hornik/tmp/R-d-clang-xtra/include/R_ext/Applic.h:72:51: note: passing argument to parameter 'ex' here 72 | int *fail, double abstol, double intol, void *ex, | ^ 3 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c weighted_lowess.c -o weighted_lowess.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o limma.so init.o normexp.o weighted_lowess.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpmDndbp/R.INSTALL18626b2bd8782b/limma/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-limma/00new/limma/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (limma) begin installing package ‘edgeR’ * installing *source* package ‘lubridate’ ... ** this is package ‘lubridate’ version ‘1.9.4’ ** package ‘lubridate’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdadcNP/R.INSTALL186f9558162b26/lubridate/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c datetime.c -o datetime.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c period.c -o period.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tparse.c -o tparse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o lubridate.so datetime.o init.o period.o tparse.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdadcNP/R.INSTALL186f9558162b26/lubridate/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-lubridate/00new/lubridate/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lubridate) * installing *source* package ‘fontawesome’ ... ** this is package ‘fontawesome’ version ‘0.5.3’ ** package ‘fontawesome’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fontawesome) * installing *source* package ‘data.table’ ... ** this is package ‘data.table’ version ‘1.16.4’ ** package ‘data.table’ successfully unpacked and MD5 sums checked ** using staged installation zlib 1.3.1 is available ok * checking if R installation supports OpenMP without any extra hints... yes ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp07rgJn/R.INSTALL184cfe177f350a/data.table/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c assign.c -o assign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c between.c -o between.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c bmerge.c -o bmerge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c chmatch.c -o chmatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c cj.c -o cj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c coalesce.c -o coalesce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c dogroups.c -o dogroups.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fastmean.c -o fastmean.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fcast.c -o fcast.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fifelse.c -o fifelse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fmelt.c -o fmelt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c forder.c -o forder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frank.c -o frank.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fread.c -o fread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c freadR.c -o freadR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c froll.c -o froll.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frollR.c -o frollR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c frolladaptive.c -o frolladaptive.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fsort.c -o fsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fwrite.c -o fwrite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fwriteR.c -o fwriteR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c gsumm.c -o gsumm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c idatetime.c -o idatetime.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c ijoin.c -o ijoin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c inrange.c -o inrange.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c nafill.c -o nafill.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c negate.c -o negate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c nqrecreateindices.c -o nqrecreateindices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c openmp-utils.c -o openmp-utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c programming.c -o programming.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c quickselect.c -o quickselect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c rbindlist.c -o rbindlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c reorder.c -o reorder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c shift.c -o shift.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c snprintf.c -o snprintf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c subset.c -o subset.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c transpose.c -o transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c types.c -o types.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c uniqlist.c -o uniqlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c vecseq.c -o vecseq.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c wrappers.c -o wrappers.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o data.table.so assign.o between.o bmerge.o chmatch.o cj.o coalesce.o dogroups.o fastmean.o fcast.o fifelse.o fmelt.o forder.o frank.o fread.o freadR.o froll.o frollR.o frolladaptive.o fsort.o fwrite.o fwriteR.o gsumm.o idatetime.o ijoin.o init.o inrange.o nafill.o negate.o nqrecreateindices.o openmp-utils.o programming.o quickselect.o rbindlist.o reorder.o shift.o snprintf.o subset.o transpose.o types.o uniqlist.o utils.o vecseq.o wrappers.o -fopenmp -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR PKG_CFLAGS = -fopenmp PKG_LIBS = -fopenmp -lz if [ "data.table.so" != "data_table.so" ]; then mv data.table.so data_table.so; fi if [ "" != "Windows_NT" ] && [ `uname -s` = 'Darwin' ]; then install_name_tool -id data_table.so data_table.so; fi make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp07rgJn/R.INSTALL184cfe177f350a/data.table/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-data.table/00new/data.table/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (data.table) * installing *source* package ‘crosstalk’ ... ** this is package ‘crosstalk’ version ‘1.2.1’ ** package ‘crosstalk’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (crosstalk) * installing *source* package ‘gridExtra’ ... ** this is package ‘gridExtra’ version ‘2.3’ ** package ‘gridExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gridExtra) * installing *source* package ‘scales’ ... ** this is package ‘scales’ version ‘1.3.0’ ** package ‘scales’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scales) * installing *source* package ‘later’ ... ** this is package ‘later’ version ‘1.4.1’ ** package ‘later’ successfully unpacked and MD5 sums checked ** using staged installation Running configure script -latomic linker flag not needed. Found UBSAN. Will skip tests that raise false positives. ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpclnqne/R.INSTALL1870a52624809b/later/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c callback_registry.cpp -o callback_registry.o In file included from callback_registry.cpp:6: In file included from ./callback_registry.h:10: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c debug.cpp -o debug.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fd.cpp -o fd.o In file included from fd.cpp:7: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c later.cpp -o later.o In file included from later.cpp:1: In file included from ./later.h:6: In file included from ./callback_registry.h:10: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c later_posix.cpp -o later_posix.o In file included from later_posix.cpp:9: In file included from ./later.h:6: In file included from ./callback_registry.h:10: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c later_win32.cpp -o later_win32.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timer_posix.cpp -o timer_posix.o In file included from timer_posix.cpp:6: In file included from ./timer_posix.h:8: In file included from ./threadutils.h:8: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timestamp_unix.cpp -o timestamp_unix.o In file included from timestamp_unix.cpp:5: In file included from ./timeconv.h:9: In file included from ./tinycthread.h:32: ./badthreads.h:48:9: warning: keyword is hidden by macro definition [-Wkeyword-macro] 48 | #define thread_local THREADS_H_ERROR | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c timestamp_win32.cpp -o timestamp_win32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tinycthread.c -o tinycthread.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -pthread -DSTRICT_R_HEADERS -DRCPP_NO_MODULES -DUSING_UBSAN -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c wref.c -o wref.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o later.so RcppExports.o callback_registry.o debug.o fd.o init.o later.o later_posix.o later_win32.o timer_posix.o timestamp_unix.o timestamp_win32.o tinycthread.o wref.o -pthread -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpclnqne/R.INSTALL1870a52624809b/later/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-later/00new/later/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (later) begin installing package ‘promises’ * installing *source* package ‘RcppArmadillo’ ... ** this is package ‘RcppArmadillo’ version ‘14.2.2-1’ ** package ‘RcppArmadillo’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking how to run the C++ preprocessor... clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -E checking whether the compiler supports GNU C++... (cached) yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... (cached) yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... (cached) none needed checking whether we have a suitable tempdir... /home/hornik/tmp/scratch checking whether R CMD SHLIB can already compile programs using OpenMP... yes checking LAPACK_LIBS... system LAPACK found configure: creating ./config.status config.status: creating inst/include/RcppArmadillo/config/RcppArmadilloConfigGenerated.h config.status: creating src/Makevars ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpFTuJKz/R.INSTALL186fbd205c49b/RcppArmadillo/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppArmadillo.cpp -o RcppArmadillo.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I../inst/include -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fastLm.cpp -o fastLm.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o RcppArmadillo.so RcppArmadillo.o RcppExports.o fastLm.o -fopenmp -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpFTuJKz/R.INSTALL186fbd205c49b/RcppArmadillo/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-RcppArmadillo/00new/RcppArmadillo/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppArmadillo) * installing *source* package ‘BiocParallel’ ... ** this is package ‘BiocParallel’ version ‘1.40.0’ ** package ‘BiocParallel’ successfully unpacked and MD5 sums checked ** using staged installation checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking for library containing shm_open... none required checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for sys/mman.h... yes configure: creating ./config.status config.status: creating src/Makevars ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++11 make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppPX1mc/R.INSTALL1874f8507dd91c/BiocParallel/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/BH/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/BH/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ipcmutex.cpp -o ipcmutex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++11 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o BiocParallel.so cpp11.o ipcmutex.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppPX1mc/R.INSTALL1874f8507dd91c/BiocParallel/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-BiocParallel/00new/BiocParallel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BiocParallel) * installing *source* package ‘S4Vectors’ ... ** this is package ‘S4Vectors’ version ‘0.44.0’ ** package ‘S4Vectors’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppaapHE/R.INSTALL185ed31f95ae0/S4Vectors/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c AEbufs.c -o AEbufs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c DataFrame_class.c -o DataFrame_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Hits_class.c -o Hits_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c LLint_class.c -o LLint_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c List_class.c -o List_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_S4Vectors.c -o R_init_S4Vectors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rle_class.c -o Rle_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Rle_utils.c -o Rle_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SEXP_utils.c -o SEXP_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SimpleList_class.c -o SimpleList_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c anyMissing.c -o anyMissing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c character_utils.c -o character_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c eval_utils.c -o eval_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c hash_utils.c -o hash_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c integer_utils.c -o integer_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c logical_utils.c -o logical_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c map_ranges_to_runs.c -o map_ranges_to_runs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c raw_utils.c -o raw_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c safe_arithm.c -o safe_arithm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sort_utils.c -o sort_utils.o sort_utils.c:263:13: warning: unused function 'sort_uchar_array' [-Wunused-function] 263 | static void sort_uchar_array(unsigned char *x, int nelt, int desc) | ^~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c subsetting_utils.c -o subsetting_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vector_utils.c -o vector_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o S4Vectors.so AEbufs.o DataFrame_class.o Hits_class.o LLint_class.o List_class.o R_init_S4Vectors.o Rle_class.o Rle_utils.o SEXP_utils.o SimpleList_class.o anyMissing.o character_utils.o eval_utils.o hash_utils.o integer_utils.o logical_utils.o map_ranges_to_runs.o raw_utils.o safe_arithm.o sort_utils.o subsetting_utils.o vector_utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppaapHE/R.INSTALL185ed31f95ae0/S4Vectors/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-S4Vectors/00new/S4Vectors/libs ** R ** inst ** byte-compile and prepare package for lazy loading in method for ‘normalizeSingleBracketReplacementValue’ with signature ‘"List"’: no definition for class “List” Creating a new generic function for ‘unname’ in package ‘S4Vectors’ Creating a new generic function for ‘expand.grid’ in package ‘S4Vectors’ Creating a new generic function for ‘findMatches’ in package ‘S4Vectors’ Creating a generic function for ‘setequal’ from package ‘base’ in package ‘S4Vectors’ in method for ‘coerce’ with signature ‘"Hits","DFrame"’: no definition for class “DFrame” Creating a generic function for ‘as.factor’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘tabulate’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘cov’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘cor’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘S4Vectors’ Creating a generic function for ‘nchar’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘substr’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘substring’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘chartr’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘tolower’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘toupper’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘sub’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘gsub’ from package ‘base’ in package ‘S4Vectors’ Creating a generic function for ‘nlevels’ from package ‘base’ in package ‘S4Vectors’ in method for ‘coerce’ with signature ‘"data.table","DFrame"’: no definition for class “data.table” Creating a generic function for ‘complete.cases’ from package ‘stats’ in package ‘S4Vectors’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (S4Vectors) begin installing package ‘IRanges’ begin installing package ‘UCSC.utils’ * installing *source* package ‘promises’ ... ** this is package ‘promises’ version ‘1.3.2’ ** package ‘promises’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp4tqctg/R.INSTALL187cca2b0321f2/promises/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/later/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c promise_task.cpp -o promise_task.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o promises.so RcppExports.o promise_task.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp4tqctg/R.INSTALL187cca2b0321f2/promises/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-promises/00new/promises/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (promises) * installing *source* package ‘UCSC.utils’ ... ** this is package ‘UCSC.utils’ version ‘1.2.0’ ** package ‘UCSC.utils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (UCSC.utils) * installing *source* package ‘edgeR’ ... ** this is package ‘edgeR’ version ‘4.4.2’ ** package ‘edgeR’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUGth5f/R.INSTALL187b7a57f076eb/edgeR/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_exports.c -o R_exports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_process_hairpin_reads.c -o R_process_hairpin_reads.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c add_prior_count.c -o add_prior_count.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c clowess.c -o clowess.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compute_apl.c -o compute_apl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compute_cpm.c -o compute_cpm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compute_nbdev.c -o compute_nbdev.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c exact_test_by_dev.c -o exact_test_by_dev.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c fmm_spline.c -o fmm_spline.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c glm.c -o glm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c good_turing.c -o good_turing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c interpolator.c -o interpolator.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c loess_by_col.c -o loess_by_col.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c object.c -o object.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ql_glm.c -o ql_glm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ql_weights.c -o ql_weights.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o edgeR.so R_exports.o R_process_hairpin_reads.o add_prior_count.o clowess.o compute_apl.o compute_cpm.o compute_nbdev.o exact_test_by_dev.o fmm_spline.o glm.o good_turing.o init.o interpolator.o loess_by_col.o object.o ql_glm.o ql_weights.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUGth5f/R.INSTALL187b7a57f076eb/edgeR/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-edgeR/00new/edgeR/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (edgeR) * installing *source* package ‘vctrs’ ... ** this is package ‘vctrs’ version ‘0.6.5’ ** package ‘vctrs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQCjzbs/R.INSTALL18754c4dabb9af/vctrs/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep-lazy-character.c -o altrep-lazy-character.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep-rle.c -o altrep-rle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c altrep.c -o altrep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c arg-counter.c -o arg-counter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c arg.c -o arg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c assert.c -o assert.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c bind.c -o bind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c c-unchop.c -o c-unchop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c c.c -o c.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c callables.c -o callables.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast-bare.c -o cast-bare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast-dispatch.c -o cast-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cast.c -o cast.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c compare.c -o compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c complete.c -o complete.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c conditions.c -o conditions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dictionary.c -o dictionary.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c dim.c -o dim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c empty.c -o empty.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c equal.c -o equal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c expand.c -o expand.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fields.c -o fields.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c fill.c -o fill.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c globals.c -o globals.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c group.c -o group.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c growable.c -o growable.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c hash.c -o hash.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c interval.c -o interval.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c match-joint.c -o match-joint.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c match.c -o match.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c missing.c -o missing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c names.c -o names.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-collate.c -o order-collate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-groups.c -o order-groups.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-sortedness.c -o order-sortedness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order-truelength.c -o order-truelength.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c order.c -o order.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c poly-op.c -o poly-op.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c proxy-restore.c -o proxy-restore.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c proxy.c -o proxy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype-common.c -o ptype-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype.c -o ptype.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype2-dispatch.c -o ptype2-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ptype2.c -o ptype2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rank.c -o rank.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rep.c -o rep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang-dev.c -o rlang-dev.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rlang.c -o rlang.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c runs.c -o runs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c set.c -o set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c shape.c -o shape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c size-common.c -o size-common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c size.c -o size.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-array.c -o slice-array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-assign-array.c -o slice-assign-array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-assign.c -o slice-assign.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-chop.c -o slice-chop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice-interleave.c -o slice-interleave.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c slice.c -o slice.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c split.c -o split.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c subscript-loc.c -o subscript-loc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c subscript.c -o subscript.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c translate.c -o translate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-data-frame.c -o type-data-frame.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-date-time.c -o type-date-time.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-factor.c -o type-factor.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-info.c -o type-info.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-integer64.c -o type-integer64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c type-tibble.c -o type-tibble.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typeof2-s3.c -o typeof2-s3.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c typeof2.c -o typeof2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c unspecified.c -o unspecified.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils-dispatch.c -o utils-dispatch.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vctrs-core.c -o vctrs-core.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./rlang -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c version.c -o version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o vctrs.so altrep-lazy-character.o altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o expand.o fields.o fill.o globals.o group.o growable.o hash.o init.o interval.o match-joint.o match.o missing.o names.o order-collate.o order-groups.o order-sortedness.o order-truelength.o order.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o rep.o rlang-dev.o rlang.o runs.o set.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o vctrs-core.o version.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQCjzbs/R.INSTALL18754c4dabb9af/vctrs/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-vctrs/00new/vctrs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (vctrs) begin installing package ‘blob’ begin installing package ‘tweenr’ begin installing package ‘tidyselect’ begin installing package ‘pillar’ begin installing package ‘purrr’ begin installing package ‘igraph’ * installing *source* package ‘systemfonts’ ... ** this is package ‘systemfonts’ version ‘1.2.1’ ** package ‘systemfonts’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/freetype2 -I/usr/include/libpng16 Using PKG_LIBS=-lfontconfig -lfreetype ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpyRckF5/R.INSTALL1875482a785d65/systemfonts/src' rm -f systemfonts.so caches.o cpp11.o dev_metrics.o font_matching.o font_local.o font_registry.o ft_cache.o string_shape.o font_metrics.o font_outlines.o font_fallback.o string_metrics.o emoji.o cache_store.o init.o unix/FontManagerLinux.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c caches.cpp -o caches.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c dev_metrics.cpp -o dev_metrics.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_matching.cpp -o font_matching.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_local.cpp -o font_local.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_registry.cpp -o font_registry.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ft_cache.cpp -o ft_cache.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c string_shape.cpp -o string_shape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_metrics.cpp -o font_metrics.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_outlines.cpp -o font_outlines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_fallback.cpp -o font_fallback.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c string_metrics.cpp -o string_metrics.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c emoji.cpp -o emoji.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cache_store.cpp -o cache_store.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/freetype2 -I/usr/include/libpng16 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c unix/FontManagerLinux.cpp -o unix/FontManagerLinux.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o systemfonts.so caches.o cpp11.o dev_metrics.o font_matching.o font_local.o font_registry.o ft_cache.o string_shape.o font_metrics.o font_outlines.o font_fallback.o string_metrics.o emoji.o cache_store.o init.o unix/FontManagerLinux.o -lfontconfig -lfreetype -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpyRckF5/R.INSTALL1875482a785d65/systemfonts/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-systemfonts/00new/systemfonts/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (systemfonts) begin installing package ‘gdtools’ * installing *source* package ‘blob’ ... ** this is package ‘blob’ version ‘1.2.4’ ** package ‘blob’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (blob) begin installing package ‘RSQLite’ * installing *source* package ‘tidyselect’ ... ** this is package ‘tidyselect’ version ‘1.2.1’ ** package ‘tidyselect’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyselect) * installing *source* package ‘purrr’ ... ** this is package ‘purrr’ version ‘1.0.2’ ** package ‘purrr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9lyMKL/R.INSTALL187fbe7692b0f/purrr/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c backports.c -o backports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c cleancall.c -o cleancall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c conditions.c -o conditions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c flatten.c -o flatten.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c map.c -o map.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c pluck.c -o pluck.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c transpose.c -o transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o purrr.so backports.o cleancall.o coerce.o conditions.o flatten.o init.o map.o pluck.o transpose.o utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9lyMKL/R.INSTALL187fbe7692b0f/purrr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-purrr/00new/purrr/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (purrr) * installing *source* package ‘RcppEigen’ ... ** this is package ‘RcppEigen’ version ‘0.3.4.0.2’ ** package ‘RcppEigen’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp2p0nAw/R.INSTALL186fb94062a276/RcppEigen/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppEigen.cpp -o RcppEigen.o In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:26: In file included from ../inst/include/Eigen/SparseCore:61: ../inst/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:29: In file included from ../inst/include/Eigen/SparseLU:35: ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:31: In file included from ../inst/include/unsupported/Eigen/IterativeSolvers:46: ../inst/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppEigen.cpp:22: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:37: In file included from ../inst/include/unsupported/Eigen/SparseExtra:45: ../inst/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:26: In file included from ../inst/include/Eigen/SparseCore:61: ../inst/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:29: In file included from ../inst/include/Eigen/SparseLU:35: ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:31: In file included from ../inst/include/unsupported/Eigen/IterativeSolvers:46: ../inst/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:4: In file included from ./../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:37: In file included from ../inst/include/unsupported/Eigen/SparseExtra:45: ../inst/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fastLm.cpp -o fastLm.o In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:26: In file included from ../inst/include/Eigen/SparseCore:61: ../inst/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:29: In file included from ../inst/include/Eigen/Sparse:29: In file included from ../inst/include/Eigen/SparseLU:35: ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ ../inst/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:31: In file included from ../inst/include/unsupported/Eigen/IterativeSolvers:46: ../inst/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from fastLm.cpp:23: In file included from ./fastLm.h:25: In file included from ../inst/include/RcppEigen.h:25: In file included from ../inst/include/RcppEigenForward.h:37: In file included from ../inst/include/unsupported/Eigen/SparseExtra:45: ../inst/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o RcppEigen.so RcppEigen.o RcppExports.o fastLm.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp2p0nAw/R.INSTALL186fb94062a276/RcppEigen/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-RcppEigen/00new/RcppEigen/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppEigen) begin installing package ‘lme4’ * installing *source* package ‘pillar’ ... ** this is package ‘pillar’ version ‘1.10.1’ ** package ‘pillar’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pillar) begin installing package ‘tibble’ * installing *source* package ‘ape’ ... ** this is package ‘ape’ version ‘5.8-1’ ** package ‘ape’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdRRDGI/R.INSTALL186fbc309b5133/ape/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c BIONJ.c -o BIONJ.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NNI.c -o NNI.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SPR.c -o SPR.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c additive.c -o additive.o additive.c:13:9: warning: variable 'm' set but not used [-Wunused-but-set-variable] 13 | int m=*mp; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ape.c -o ape.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bNNI.c -o bNNI.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bionjs.c -o bionjs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bipartition.c -o bipartition.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c bitsplits.c -o bitsplits.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c delta_plot.c -o delta_plot.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dist_dna.c -o dist_dna.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dist_nodes.c -o dist_nodes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ewLasso.c -o ewLasso.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c heap.c -o heap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mat_expo.c -o mat_expo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c me.c -o me.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c me_balanced.c -o me_balanced.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c me_ols.c -o me_ols.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mvr.c -o mvr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mvrs.c -o mvrs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nj.c -o nj.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c njs.c -o njs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pic.c -o pic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c plot_phylo.c -o plot_phylo.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c prop_part.cpp -o prop_part.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rTrait.c -o rTrait.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_dna.c -o read_dna.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c reorder_Rcpp.cpp -o reorder_Rcpp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c reorder_phylo.c -o reorder_phylo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c treePop.c -o treePop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tree_build.c -o tree_build.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c tree_phylo.c -o tree_phylo.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c triangMtd.c -o triangMtd.o triangMtd.c:89:9: warning: variable 'ij' set but not used [-Wunused-but-set-variable] 89 | int ij=-1; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c triangMtds.c -o triangMtds.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ultrametric.c -o ultrametric.o ultrametric.c:13:9: warning: variable 'm' set but not used [-Wunused-but-set-variable] 13 | int m=*mp; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ape.so BIONJ.o NNI.o RcppExports.o SPR.o additive.o ape.o bNNI.o bionjs.o bipartition.o bitsplits.o delta_plot.o dist_dna.o dist_nodes.o ewLasso.o heap.o mat_expo.o me.o me_balanced.o me_ols.o mvr.o mvrs.o nj.o njs.o pic.o plot_phylo.o prop_part.o rTrait.o read_dna.o reorder_Rcpp.o reorder_phylo.o treePop.o tree_build.o tree_phylo.o triangMtd.o triangMtds.o ultrametric.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdRRDGI/R.INSTALL186fbc309b5133/ape/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ape/00new/ape/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ape) * installing *source* package ‘gdtools’ ... ** this is package ‘gdtools’ version ‘0.4.1’ ** package ‘gdtools’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 Using PKG_LIBS=-lcairo -lfreetype ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpT4lcKl/R.INSTALL187fe6530a0916/gdtools/src' rm -f gdtools.so CairoContext.o RcppExports.o font_metrics.o gdtools.o raster_to_base64.o versions.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I../inst/include/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c CairoContext.cpp -o CairoContext.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I../inst/include/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I../inst/include/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c font_metrics.cpp -o font_metrics.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I../inst/include/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c gdtools.cpp -o gdtools.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I../inst/include/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c raster_to_base64.cpp -o raster_to_base64.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/include/cairo -I/usr/include/libpng16 -I/usr/include/freetype2 -I/usr/include/pixman-1 -I../inst/include/ -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c versions.cpp -o versions.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o gdtools.so CairoContext.o RcppExports.o font_metrics.o gdtools.o raster_to_base64.o versions.o -lcairo -lfreetype -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpT4lcKl/R.INSTALL187fe6530a0916/gdtools/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-gdtools/00new/gdtools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gdtools) * installing *source* package ‘stringi’ ... ** this is package ‘stringi’ version ‘1.8.4’ ** package ‘stringi’ successfully unpacked and MD5 sums checked ** using staged installation checking for R_HOME... /home/hornik/tmp/R-d-clang-xtra checking for R... /home/hornik/tmp/R-d-clang-xtra/bin/R checking for endianness... little checking for cat... /usr/bin/cat checking whether the C++ compiler works... yes checking for C++ compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether the compiler supports GNU C++... yes checking whether clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 accepts -g... yes checking for clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 option to enable C++11 features... none needed checking whether the C++ compiler supports the 'long long' type... yes checking whether the compiler implements namespaces... yes checking whether the compiler supports the Standard Template Library... yes checking whether std::map is available... yes checking for pkg-config... /usr/bin/pkg-config checking with 'pkg-config' for the system ICU4C (icu-i18n icu-uc)... 72.1 checking for ICU4C >= 61... yes checking for additional CPPFLAGS, LDFLAGS, and LIBS required... done checking whether an ICU4C-based project can be built... yes checking programmatically for sufficient U_ICU_VERSION_MAJOR_NUM... yes checking the capabilities of the ICU data library (ucnv, uloc, utrans)... yes checking the capabilities of the ICU data library (ucol)... yes checking for stdio.h... yes checking for stdlib.h... yes checking for string.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for strings.h... yes checking for sys/stat.h... yes checking for sys/types.h... yes checking for unistd.h... yes checking for elf.h... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/uconfig_local.h config.status: creating src/install.libs.R *** stringi configure summary: ICU_FOUND=1 STRINGI_CXXSTD= STRINGI_CXXFLAGS= -fpic STRINGI_CPPFLAGS=-I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H STRINGI_LDFLAGS= -L/usr/lib/x86_64-linux-gnu STRINGI_LIBS= -licui18n -licuuc -licudata *** Compiler settings used: CXX=clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 LD=clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 CXXFLAGS=-g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw CPPFLAGS=-I/usr/local/include LDFLAGS= LIBS= ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpATiQou/R.INSTALL1844f4104509fe/stringi/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_brkiter.cpp -o stri_brkiter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_collator.cpp -o stri_collator.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_common.cpp -o stri_common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_compare.cpp -o stri_compare.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_base.cpp -o stri_container_base.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_bytesearch.cpp -o stri_container_bytesearch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_listint.cpp -o stri_container_listint.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_listraw.cpp -o stri_container_listraw.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_listutf8.cpp -o stri_container_listutf8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_regex.cpp -o stri_container_regex.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_usearch.cpp -o stri_container_usearch.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_utf16.cpp -o stri_container_utf16.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_utf8.cpp -o stri_container_utf8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_container_utf8_indexable.cpp -o stri_container_utf8_indexable.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_encoding_conversion.cpp -o stri_encoding_conversion.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_encoding_detection.cpp -o stri_encoding_detection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_encoding_management.cpp -o stri_encoding_management.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_escape.cpp -o stri_escape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_exception.cpp -o stri_exception.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_ICU_settings.cpp -o stri_ICU_settings.o In file included from stri_ICU_settings.cpp:37: ./uconfig_local.h:42:9: warning: 'UCONFIG_USE_WINDOWS_LCID_MAPPING_API' macro redefined [-Wmacro-redefined] 42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0 | ^ /usr/include/unicode/uconfig.h:381:12: note: previous definition is here 381 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_join.cpp -o stri_join.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_length.cpp -o stri_length.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_pad.cpp -o stri_pad.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_prepare_arg.cpp -o stri_prepare_arg.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_random.cpp -o stri_random.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_reverse.cpp -o stri_reverse.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_count.cpp -o stri_search_class_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_detect.cpp -o stri_search_class_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_extract.cpp -o stri_search_class_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_locate.cpp -o stri_search_class_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_replace.cpp -o stri_search_class_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_split.cpp -o stri_search_class_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_startsendswith.cpp -o stri_search_class_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_subset.cpp -o stri_search_class_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_class_trim.cpp -o stri_search_class_trim.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_common.cpp -o stri_search_common.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_count.cpp -o stri_search_coll_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_detect.cpp -o stri_search_coll_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_extract.cpp -o stri_search_coll_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_locate.cpp -o stri_search_coll_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_replace.cpp -o stri_search_coll_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_split.cpp -o stri_search_coll_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_startsendswith.cpp -o stri_search_coll_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_coll_subset.cpp -o stri_search_coll_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_count.cpp -o stri_search_boundaries_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_extract.cpp -o stri_search_boundaries_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_locate.cpp -o stri_search_boundaries_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_boundaries_split.cpp -o stri_search_boundaries_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_count.cpp -o stri_search_fixed_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_detect.cpp -o stri_search_fixed_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_extract.cpp -o stri_search_fixed_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_locate.cpp -o stri_search_fixed_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_replace.cpp -o stri_search_fixed_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_split.cpp -o stri_search_fixed_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_subset.cpp -o stri_search_fixed_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_fixed_startsendswith.cpp -o stri_search_fixed_startsendswith.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_in.cpp -o stri_search_in.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_other_split.cpp -o stri_search_other_split.o stri_search_other_split.cpp:202:24: warning: variable 'k' set but not used [-Wunused-but-set-variable] 202 | R_len_t jlast, k=1; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_count.cpp -o stri_search_regex_count.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_detect.cpp -o stri_search_regex_detect.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_extract.cpp -o stri_search_regex_extract.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_locate.cpp -o stri_search_regex_locate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_match.cpp -o stri_search_regex_match.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_replace.cpp -o stri_search_regex_replace.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_split.cpp -o stri_search_regex_split.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_search_regex_subset.cpp -o stri_search_regex_subset.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_sort.cpp -o stri_sort.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_sprintf.cpp -o stri_sprintf.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_stats.cpp -o stri_stats.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_string8.cpp -o stri_string8.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_stringi.cpp -o stri_stringi.o In file included from stri_stringi.cpp:39: ./uconfig_local.h:42:9: warning: 'UCONFIG_USE_WINDOWS_LCID_MAPPING_API' macro redefined [-Wmacro-redefined] 42 | #define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 0 | ^ /usr/include/unicode/uconfig.h:381:12: note: previous definition is here 381 | # define UCONFIG_USE_WINDOWS_LCID_MAPPING_API 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_sub.cpp -o stri_sub.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_test.cpp -o stri_test.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_zone.cpp -o stri_time_zone.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_calendar.cpp -o stri_time_calendar.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_symbols.cpp -o stri_time_symbols.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_time_format.cpp -o stri_time_format.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_casemap.cpp -o stri_trans_casemap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_other.cpp -o stri_trans_other.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_normalization.cpp -o stri_trans_normalization.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_trans_transliterate.cpp -o stri_trans_transliterate.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_ucnv.cpp -o stri_ucnv.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_uloc.cpp -o stri_uloc.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_utils.cpp -o stri_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -UDEBUG -DNDEBUG -DU_HAVE_ELF_H -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stri_wrap.cpp -o stri_wrap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o stringi.so stri_brkiter.o stri_collator.o stri_common.o stri_compare.o stri_container_base.o stri_container_bytesearch.o stri_container_listint.o stri_container_listraw.o stri_container_listutf8.o stri_container_regex.o stri_container_usearch.o stri_container_utf16.o stri_container_utf8.o stri_container_utf8_indexable.o stri_encoding_conversion.o stri_encoding_detection.o stri_encoding_management.o stri_escape.o stri_exception.o stri_ICU_settings.o stri_join.o stri_length.o stri_pad.o stri_prepare_arg.o stri_random.o stri_reverse.o stri_search_class_count.o stri_search_class_detect.o stri_search_class_extract.o stri_search_class_locate.o stri_search_class_replace.o stri_search_class_split.o stri_search_class_startsendswith.o stri_search_class_subset.o stri_search_class_trim.o stri_search_common.o stri_search_coll_count.o stri_search_coll_detect.o stri_search_coll_extract.o stri_search_coll_locate.o stri_search_coll_replace.o stri_search_coll_split.o stri_search_coll_startsendswith.o stri_search_coll_subset.o stri_search_boundaries_count.o stri_search_boundaries_extract.o stri_search_boundaries_locate.o stri_search_boundaries_split.o stri_search_fixed_count.o stri_search_fixed_detect.o stri_search_fixed_extract.o stri_search_fixed_locate.o stri_search_fixed_replace.o stri_search_fixed_split.o stri_search_fixed_subset.o stri_search_fixed_startsendswith.o stri_search_in.o stri_search_other_split.o stri_search_regex_count.o stri_search_regex_detect.o stri_search_regex_extract.o stri_search_regex_locate.o stri_search_regex_match.o stri_search_regex_replace.o stri_search_regex_split.o stri_search_regex_subset.o stri_sort.o stri_sprintf.o stri_stats.o stri_string8.o stri_stringi.o stri_sub.o stri_test.o stri_time_zone.o stri_time_calendar.o stri_time_symbols.o stri_time_format.o stri_trans_casemap.o stri_trans_other.o stri_trans_normalization.o stri_trans_transliterate.o stri_ucnv.o stri_uloc.o stri_utils.o stri_wrap.o -L/usr/lib/x86_64-linux-gnu -licui18n -licuuc -licudata -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpATiQou/R.INSTALL1844f4104509fe/stringi/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-stringi/00new/stringi ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringi) begin installing package ‘textshaping’ begin installing package ‘stringr’ * installing *source* package ‘tibble’ ... ** this is package ‘tibble’ version ‘3.2.1’ ** package ‘tibble’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQnbalm/R.INSTALL1883ce45f21651/tibble/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c attributes.c -o attributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coerce.c -o coerce.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c matrixToDataFrame.c -o matrixToDataFrame.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQnbalm/R.INSTALL1883ce45f21651/tibble/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tibble/00new/tibble/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tibble) begin installing package ‘forcats’ begin installing package ‘dplyr’ begin installing package ‘ggplot2’ * installing *source* package ‘forcats’ ... ** this is package ‘forcats’ version ‘1.0.0’ ** package ‘forcats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (forcats) * installing *source* package ‘stringr’ ... ** this is package ‘stringr’ version ‘1.5.1’ ** package ‘stringr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (stringr) * installing *source* package ‘tweenr’ ... ** this is package ‘tweenr’ version ‘2.0.3’ ** package ‘tweenr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVWogle/R.INSTALL187fb8778612f6/tweenr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c along.cpp -o along.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c at.cpp -o at.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c easing.c -o easing.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c element.cpp -o element.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c element_at.cpp -o element_at.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c fill.cpp -o fill.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c state.cpp -o state.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tweenr.so along.o at.o cpp11.o easing.o element.o element_at.o fill.o state.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVWogle/R.INSTALL187fb8778612f6/tweenr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tweenr/00new/tweenr/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tweenr) * installing *source* package ‘textshaping’ ... ** this is package ‘textshaping’ version ‘1.0.0’ ** package ‘textshaping’ successfully unpacked and MD5 sums checked ** using staged installation Found pkg-config cflags and libs! Using PKG_CFLAGS=-I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi Using PKG_LIBS=-lharfbuzz -lfreetype -lfribidi ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppZHRlJ/R.INSTALL18871412310e0a/textshaping/src' rm -f textshaping.so cpp11.o face_feature.o hb_shaper.o init.o string_bidi.o string_metrics.o string_shape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c face_feature.cpp -o face_feature.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c hb_shaper.cpp -o hb_shaper.o In file included from hb_shaper.cpp:1: In file included from ./hb_shaper.h:4: In file included from ./string_shape.h:16: ./utils.h:7:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 7 | #define R_NO_REMAP | ^ :5:9: note: previous definition is here 5 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:2: In file included from ./hb_shaper.h:4: In file included from ./string_shape.h:16: ./utils.h:7:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 7 | #define R_NO_REMAP | ^ :5:9: note: previous definition is here 5 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c string_bidi.cpp -o string_bidi.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c string_metrics.cpp -o string_metrics.o string_metrics.cpp:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :5:9: note: previous definition is here 5 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DNDEBUG -I/usr/include/harfbuzz -I/usr/include/freetype2 -I/usr/include/libpng16 -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/sysprof-6 -pthread -I/usr/include/fribidi -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/systemfonts/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c string_shape.cpp -o string_shape.o In file included from string_shape.cpp:9: In file included from ./string_shape.h:16: ./utils.h:7:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 7 | #define R_NO_REMAP | ^ :5:9: note: previous definition is here 5 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o textshaping.so cpp11.o face_feature.o hb_shaper.o init.o string_bidi.o string_metrics.o string_shape.o -lharfbuzz -lfreetype -lfribidi -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppZHRlJ/R.INSTALL18871412310e0a/textshaping/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-textshaping/00new/textshaping/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (textshaping) * installing *source* package ‘dplyr’ ... ** this is package ‘dplyr’ version ‘1.1.4’ ** package ‘dplyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpo4CXFh/R.INSTALL1887356f807d63/dplyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c chop.cpp -o chop.o In file included from chop.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c filter.cpp -o filter.o In file included from filter.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c funs.cpp -o funs.o In file included from funs.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c group_by.cpp -o group_by.o In file included from group_by.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c group_data.cpp -o group_data.o In file included from group_data.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c imports.cpp -o imports.o In file included from imports.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o In file included from init.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c mask.cpp -o mask.o In file included from mask.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c mutate.cpp -o mutate.o In file included from mutate.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c reconstruct.cpp -o reconstruct.o In file included from reconstruct.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c slice.cpp -o slice.o In file included from slice.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c summarise.cpp -o summarise.o In file included from summarise.cpp:1: ./dplyr.h:4:9: warning: 'R_NO_REMAP' macro redefined [-Wmacro-redefined] 4 | #define R_NO_REMAP | ^ :4:9: note: previous definition is here 4 | #define R_NO_REMAP 1 | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o dplyr.so chop.o filter.o funs.o group_by.o group_data.o imports.o init.o mask.o mutate.o reconstruct.o slice.o summarise.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpo4CXFh/R.INSTALL1887356f807d63/dplyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-dplyr/00new/dplyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dplyr) begin installing package ‘tidyr’ * installing *source* package ‘tidyr’ ... ** this is package ‘tidyr’ version ‘1.3.1’ ** package ‘tidyr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxBVtVO/R.INSTALL188a8f4413150d/tidyr/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c melt.cpp -o melt.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c simplifyPieces.cpp -o simplifyPieces.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tidyr.so cpp11.o melt.o simplifyPieces.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxBVtVO/R.INSTALL188a8f4413150d/tidyr/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tidyr/00new/tidyr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidyr) begin installing package ‘broom’ begin installing package ‘tidytree’ * installing *source* package ‘ggplot2’ ... ** this is package ‘ggplot2’ version ‘3.5.1’ ** package ‘ggplot2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggplot2) begin installing package ‘ggplotify’ begin installing package ‘patchwork’ begin installing package ‘ggrepel’ begin installing package ‘ggsci’ begin installing package ‘cowplot’ begin installing package ‘ggsignif’ begin installing package ‘ggfun’ begin installing package ‘ggforce’ begin installing package ‘viridis’ begin installing package ‘ggdensity’ begin installing package ‘hrbrthemes’ begin installing package ‘geomtextpath’ begin installing package ‘ggnewscale’ * installing *source* package ‘ggplotify’ ... ** this is package ‘ggplotify’ version ‘0.1.2’ ** package ‘ggplotify’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggplotify) * installing *source* package ‘ggnewscale’ ... ** this is package ‘ggnewscale’ version ‘0.5.0’ ** package ‘ggnewscale’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggnewscale) * installing *source* package ‘ggsignif’ ... ** this is package ‘ggsignif’ version ‘0.6.4’ ** package ‘ggsignif’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggsignif) * installing *source* package ‘viridis’ ... ** this is package ‘viridis’ version ‘0.6.5’ ** package ‘viridis’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (viridis) * installing *source* package ‘ggfun’ ... ** this is package ‘ggfun’ version ‘0.1.8’ ** package ‘ggfun’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggfun) * installing *source* package ‘ggdensity’ ... ** this is package ‘ggdensity’ version ‘1.0.0’ ** package ‘ggdensity’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggdensity) * installing *source* package ‘hrbrthemes’ ... ** this is package ‘hrbrthemes’ version ‘0.8.7’ ** package ‘hrbrthemes’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (hrbrthemes) * installing *source* package ‘ggsci’ ... ** this is package ‘ggsci’ version ‘3.2.0’ ** package ‘ggsci’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggsci) * installing *source* package ‘cowplot’ ... ** this is package ‘cowplot’ version ‘1.1.3’ ** package ‘cowplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cowplot) * installing *source* package ‘tidytree’ ... ** this is package ‘tidytree’ version ‘0.4.6’ ** package ‘tidytree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidytree) begin installing package ‘treeio’ * installing *source* package ‘patchwork’ ... ** this is package ‘patchwork’ version ‘1.3.0’ ** package ‘patchwork’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (patchwork) begin installing package ‘aplot’ * installing *source* package ‘geomtextpath’ ... ** this is package ‘geomtextpath’ version ‘0.1.5’ ** package ‘geomtextpath’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (geomtextpath) * installing *source* package ‘ggrepel’ ... ** this is package ‘ggrepel’ version ‘0.9.6’ ** package ‘ggrepel’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwDZL0B/R.INSTALL188b826c373625/ggrepel/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c repel_boxes.cpp -o repel_boxes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ggrepel.so RcppExports.o repel_boxes.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwDZL0B/R.INSTALL188b826c373625/ggrepel/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ggrepel/00new/ggrepel/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggrepel) * installing *source* package ‘aplot’ ... ** this is package ‘aplot’ version ‘0.2.4’ ** package ‘aplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (aplot) begin installing package ‘ggVennDiagram’ * installing *source* package ‘broom’ ... ** this is package ‘broom’ version ‘1.0.7’ ** package ‘broom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (broom) begin installing package ‘modelr’ * installing *source* package ‘lme4’ ... ** this is package ‘lme4’ version ‘1.1-36’ ** package ‘lme4’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMG7Vns/R.INSTALL1883bd19169779/lme4/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c external.cpp -o external.o In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from external.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c glmFamily.cpp -o glmFamily.o In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from glmFamily.cpp:8: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c optimizer.cpp -o optimizer.o In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from optimizer.cpp:13: In file included from ./optimizer.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c predModule.cpp -o predModule.o In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from predModule.cpp:8: In file included from ./predModule.h:12: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I'/home/hornik/tmp/R-d-clang-xtra/library/Matrix/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DNDEBUG -DEIGEN_DONT_VECTORIZE -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c respModule.cpp -o respModule.o In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from respModule.cpp:7: In file included from ./respModule.h:12: In file included from ./glmFamily.h:11: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o lme4.so external.o glmFamily.o optimizer.o predModule.o respModule.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMG7Vns/R.INSTALL1883bd19169779/lme4/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-lme4/00new/lme4/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lme4) * installing *source* package ‘treeio’ ... ** this is package ‘treeio’ version ‘1.30.0’ ** package ‘treeio’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (treeio) begin installing package ‘ggtree’ * installing *source* package ‘modelr’ ... ** this is package ‘modelr’ version ‘0.1.11’ ** package ‘modelr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (modelr) begin installing package ‘doBy’ * installing *source* package ‘ggVennDiagram’ ... ** this is package ‘ggVennDiagram’ version ‘1.5.2’ ** package ‘ggVennDiagram’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggVennDiagram) * installing *source* package ‘IRanges’ ... ** this is package ‘IRanges’ version ‘2.40.1’ ** package ‘IRanges’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbolczB/R.INSTALL187e614e61c2b5/IRanges/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c CompressedAtomicList_utils.c -o CompressedAtomicList_utils.o In file included from CompressedAtomicList_utils.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c CompressedIRangesList_class.c -o CompressedIRangesList_class.o In file included from CompressedIRangesList_class.c:4: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c CompressedList_class.c -o CompressedList_class.o In file included from CompressedList_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Grouping_class.c -o Grouping_class.o In file included from Grouping_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IPosRanges_comparison.c -o IPosRanges_comparison.o In file included from IPosRanges_comparison.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_class.c -o IRanges_class.o In file included from IRanges_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_constructor.c -o IRanges_constructor.o In file included from IRanges_constructor.c:4: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c NCList.c -o NCList.o In file included from NCList.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void NCList.c:114:56: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 114 | static NCListWalkingStackElt *pop_NCListWalkingStackElt() | ^ | void NCList.c:122:57: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 122 | static NCListWalkingStackElt *peek_NCListWalkingStackElt() | ^ | void NCList.c:127:40: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 127 | static void extend_NCList_walking_stack() | ^ | void NCList.c:172:41: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 172 | static const NCList *move_to_right_uncle() | ^ | void NCList.c:225:36: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 225 | static const NCList *next_bottom_up() | ^ | void NCList.c:356:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 356 | SEXP C_new_NCList() | ^ | void NCList.c:446:41: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 446 | static void extend_NCList_building_stack() | ^ | void NCList.c:202:22: warning: unused function 'next_top_down' [-Wunused-function] 202 | static const NCList *next_top_down(const NCList *nclist) | ^~~~~~~~~~~~~ NCList.c:1173:13: warning: function 'NCList_get_y_overlaps_rec' is not needed and will not be emitted [-Wunneeded-internal-declaration] 1173 | static void NCList_get_y_overlaps_rec(const NCList *x_nclist, | ^~~~~~~~~~~~~~~~~~~~~~~~~ 10 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_IRanges.c -o R_init_IRanges.o In file included from R_init_IRanges.c:1: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Ranges_class.c -o Ranges_class.o In file included from Ranges_class.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RleViews_utils.c -o RleViews_utils.o In file included from RleViews_utils.c:1: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SimpleIRangesList_class.c -o SimpleIRangesList_class.o In file included from SimpleIRangesList_class.c:4: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c coverage_methods.c -o coverage_methods.o In file included from coverage_methods.c:11: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c extractListFragments.c -o extractListFragments.o In file included from extractListFragments.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c inter_range_methods.c -o inter_range_methods.o In file included from inter_range_methods.c:5: ./IRanges.h:339:18: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 339 | SEXP C_new_NCList(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o IRanges.so CompressedAtomicList_utils.o CompressedIRangesList_class.o CompressedList_class.o Grouping_class.o IPosRanges_comparison.o IRanges_class.o IRanges_constructor.o NCList.o R_init_IRanges.o Ranges_class.o RleViews_utils.o S4Vectors_stubs.o SimpleIRangesList_class.o coverage_methods.o extractListFragments.o inter_range_methods.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbolczB/R.INSTALL187e614e61c2b5/IRanges/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-IRanges/00new/IRanges/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘drop’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘runmed’ from package ‘stats’ in package ‘IRanges’ Creating a generic function for ‘chartr’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘toupper’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘tolower’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘sub’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘gsub’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘startsWith’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘endsWith’ from package ‘base’ in package ‘IRanges’ Creating a generic function for ‘smoothEnds’ from package ‘stats’ in package ‘IRanges’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IRanges) begin installing package ‘XVector’ begin installing package ‘S4Arrays’ begin installing package ‘ComplexHeatmap’ begin installing package ‘GenomeInfoDb’ * installing *source* package ‘sass’ ... ** this is package ‘sass’ version ‘0.4.9’ ** package ‘sass’ successfully unpacked and MD5 sums checked ** using staged installation ** libs /home/hornik/tmp/R-d-clang-xtra/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' Makevars:12: warning: ignoring old recipe for target 'shlib-clean' using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpUnuk8B/R.INSTALL187a5c4d6528d7/sass/src' /home/hornik/tmp/R-d-clang-xtra/share/make/shlib.mk:18: warning: overriding recipe for target 'shlib-clean' Makevars:12: warning: ignoring old recipe for target 'shlib-clean' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libsass/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compile.c -o compile.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I./libsass/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o MAKEFLAGS= CC="clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer" CFLAGS="-g -O3 -Wall -pedantic" CXX="clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17" AR="ar" LDFLAGS="-Wl,-O1" make -C libsass make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpUnuk8B/R.INSTALL187a5c4d6528d7/sass/src/libsass' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -g -O3 -Wall -pedantic -O2 -I ./include -fPIC -c -o src/cencode.o src/cencode.c clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast.o src/ast.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_values.o src/ast_values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_supports.o src/ast_supports.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_cmp.o src/ast_sel_cmp.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_unify.o src/ast_sel_unify.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_super.o src/ast_sel_super.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_sel_weave.o src/ast_sel_weave.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_selectors.o src/ast_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/context.o src/context.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/constants.o src/constants.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_utils.o src/fn_utils.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_miscs.o src/fn_miscs.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_maps.o src/fn_maps.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_lists.o src/fn_lists.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_colors.o src/fn_colors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_numbers.o src/fn_numbers.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_strings.o src/fn_strings.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/fn_selectors.o src/fn_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/color_maps.o src/color_maps.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/environment.o src/environment.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast_fwd_decl.o src/ast_fwd_decl.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/bind.o src/bind.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/file.o src/file.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util.o src/util.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/util_string.o src/util_string.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/json.o src/json.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/units.o src/units.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/values.o src/values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/plugins.o src/plugins.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source.o src/source.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/position.o src/position.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/lexer.o src/lexer.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser.o src/parser.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/parser_selectors.o src/parser_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/prelexer.o src/prelexer.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval.o src/eval.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/eval_selectors.o src/eval_selectors.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/expand.o src/expand.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/listize.o src/listize.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/cssize.o src/cssize.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extender.o src/extender.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/extension.o src/extension.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/stylesheet.o src/stylesheet.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/output.o src/output.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/inspect.o src/inspect.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/emitter.o src/emitter.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/check_nesting.o src/check_nesting.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/remove_placeholders.o src/remove_placeholders.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass.o src/sass.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_values.o src/sass_values.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_context.o src/sass_context.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass_functions.o src/sass_functions.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/sass2scss.o src/sass2scss.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/backtrace.o src/backtrace.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/operators.o src/operators.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/ast2c.o src/ast2c.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/c2ast.o src/c2ast.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/to_value.o src/to_value.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/source_map.o src/source_map.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/error_handling.o src/error_handling.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/allocator.o src/memory/allocator.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/memory/shared_ptr.o src/memory/shared_ptr.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/utf8_string.o src/utf8_string.cpp clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -Wall -O2 -std=c++11 -I ./include -fPIC -c -o src/base64vlq.o src/base64vlq.cpp mkdir lib ar rcvs lib/libsass.a src/cencode.o src/ast.o src/ast_values.o src/ast_supports.o src/ast_sel_cmp.o src/ast_sel_unify.o src/ast_sel_super.o src/ast_sel_weave.o src/ast_selectors.o src/context.o src/constants.o src/fn_utils.o src/fn_miscs.o src/fn_maps.o src/fn_lists.o src/fn_colors.o src/fn_numbers.o src/fn_strings.o src/fn_selectors.o src/color_maps.o src/environment.o src/ast_fwd_decl.o src/bind.o src/file.o src/util.o src/util_string.o src/json.o src/units.o src/values.o src/plugins.o src/source.o src/position.o src/lexer.o src/parser.o src/parser_selectors.o src/prelexer.o src/eval.o src/eval_selectors.o src/expand.o src/listize.o src/cssize.o src/extender.o src/extension.o src/stylesheet.o src/output.o src/inspect.o src/emitter.o src/check_nesting.o src/remove_placeholders.o src/sass.o src/sass_values.o src/sass_context.o src/sass_functions.o src/sass2scss.o src/backtrace.o src/operators.o src/ast2c.o src/c2ast.o src/to_value.o src/source_map.o src/error_handling.o src/memory/allocator.o src/memory/shared_ptr.o src/utf8_string.o src/base64vlq.o a - src/cencode.o a - src/ast.o a - src/ast_values.o a - src/ast_supports.o a - src/ast_sel_cmp.o a - src/ast_sel_unify.o a - src/ast_sel_super.o a - src/ast_sel_weave.o a - src/ast_selectors.o a - src/context.o a - src/constants.o a - src/fn_utils.o a - src/fn_miscs.o a - src/fn_maps.o a - src/fn_lists.o a - src/fn_colors.o a - src/fn_numbers.o a - src/fn_strings.o a - src/fn_selectors.o a - src/color_maps.o a - src/environment.o a - src/ast_fwd_decl.o a - src/bind.o a - src/file.o a - src/util.o a - src/util_string.o a - src/json.o a - src/units.o a - src/values.o a - src/plugins.o a - src/source.o a - src/position.o a - src/lexer.o a - src/parser.o a - src/parser_selectors.o a - src/prelexer.o a - src/eval.o a - src/eval_selectors.o a - src/expand.o a - src/listize.o a - src/cssize.o a - src/extender.o a - src/extension.o a - src/stylesheet.o a - src/output.o a - src/inspect.o a - src/emitter.o a - src/check_nesting.o a - src/remove_placeholders.o a - src/sass.o a - src/sass_values.o a - src/sass_context.o a - src/sass_functions.o a - src/sass2scss.o a - src/backtrace.o a - src/operators.o a - src/ast2c.o a - src/c2ast.o a - src/to_value.o a - src/source_map.o a - src/error_handling.o a - src/memory/allocator.o a - src/memory/shared_ptr.o a - src/utf8_string.o a - src/base64vlq.o make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpUnuk8B/R.INSTALL187a5c4d6528d7/sass/src/libsass' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sass.so compile.o init.o ./libsass/lib/libsass.a -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpUnuk8B/R.INSTALL187a5c4d6528d7/sass/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sass/00new/sass/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sass) begin installing package ‘bslib’ * installing *source* package ‘ggtree’ ... ** this is package ‘ggtree’ version ‘3.14.0’ ** package ‘ggtree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggtree) begin installing package ‘ggtreeExtra’ * installing *source* package ‘doBy’ ... ** this is package ‘doBy’ version ‘4.6.25’ ** package ‘doBy’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Note: ... may be used in an incorrect context Note: ... may be used in an incorrect context ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (doBy) begin installing package ‘pbkrtest’ * installing *source* package ‘bslib’ ... ** this is package ‘bslib’ version ‘0.9.0’ ** package ‘bslib’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bslib) begin installing package ‘rmarkdown’ * installing *source* package ‘ggtreeExtra’ ... ** this is package ‘ggtreeExtra’ version ‘1.16.0’ ** package ‘ggtreeExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggtreeExtra) * installing *source* package ‘GenomeInfoDb’ ... ** this is package ‘GenomeInfoDb’ version ‘1.42.3’ ** package ‘GenomeInfoDb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomeInfoDb) * installing *source* package ‘XVector’ ... ** this is package ‘XVector’ version ‘0.46.0’ ** package ‘XVector’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwdG3CJ/R.INSTALL1890d95e167f43/XVector/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Ocopy_byteblocks.c -o Ocopy_byteblocks.o In file included from Ocopy_byteblocks.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RDS_random_access.c -o RDS_random_access.o In file included from RDS_random_access.c:7: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void RDS_random_access.c:793:11: warning: variable 'x_type' set but not used [-Wunused-but-set-variable] 793 | SEXPTYPE x_type; | ^ RDS_random_access.c:796:18: warning: unused variable 'ans' [-Wunused-variable] 796 | SEXP subscript, ans; | ^~~ 3 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_XVector.c -o R_init_XVector.o In file included from R_init_XVector.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedDouble_class.c -o SharedDouble_class.o In file included from SharedDouble_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedInteger_class.c -o SharedInteger_class.o In file included from SharedInteger_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedRaw_class.c -o SharedRaw_class.o In file included from SharedRaw_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void SharedRaw_class.c:396:13: warning: variable 'src_tag' set but not used [-Wunused-but-set-variable] 396 | SEXP dest, src_tag; | ^ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SharedVector_class.c -o SharedVector_class.o In file included from SharedVector_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void SharedVector_class.c:69:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 69 | SEXP externalptr_new() | ^ | void SharedVector_class.c:110:31: warning: format specifies type 'void *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat-pedantic] 110 | Rprintf(" x address: %p\n", x); | ~~ ^ SharedVector_class.c:114:41: warning: format specifies type 'void *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat-pedantic] 114 | Rprintf(" R_ExternalPtrTag(x): %p\n", s); | ~~ ^ SharedVector_class.c:118:47: warning: format specifies type 'void *' but the argument has type 'SEXP' (aka 'struct SEXPREC *') [-Wformat-pedantic] 118 | Rprintf(" R_ExternalPtrProtected(x): %p\n", s); | ~~ ^ 5 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XDouble_class.c -o XDouble_class.o In file included from XDouble_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XInteger_class.c -o XInteger_class.o In file included from XInteger_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XRawList_comparison.c -o XRawList_comparison.o In file included from XRawList_comparison.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XRaw_class.c -o XRaw_class.o In file included from XRaw_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XVectorList_class.c -o XVectorList_class.o In file included from XVectorList_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XVector_class.c -o XVector_class.o In file included from XVector_class.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c io_utils.c -o io_utils.o In file included from io_utils.c:7: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c slice_methods.c -o slice_methods.o In file included from slice_methods.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c vector_copy.c -o vector_copy.o In file included from vector_copy.c:5: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c view_summarization_methods.c -o view_summarization_methods.o In file included from view_summarization_methods.c:1: ./XVector.h:283:21: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 283 | SEXP externalptr_new(); | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o XVector.so IRanges_stubs.o Ocopy_byteblocks.o RDS_random_access.o R_init_XVector.o S4Vectors_stubs.o SharedDouble_class.o SharedInteger_class.o SharedRaw_class.o SharedVector_class.o XDouble_class.o XInteger_class.o XRawList_comparison.o XRaw_class.o XVectorList_class.o XVector_class.o io_utils.o slice_methods.o vector_copy.o view_summarization_methods.o -lz -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwdG3CJ/R.INSTALL1890d95e167f43/XVector/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-XVector/00new/XVector/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (XVector) begin installing package ‘Biostrings’ begin installing package ‘GenomicRanges’ * installing *source* package ‘pbkrtest’ ... ** this is package ‘pbkrtest’ version ‘0.5.3’ ** package ‘pbkrtest’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pbkrtest) begin installing package ‘car’ * installing *source* package ‘S4Arrays’ ... ** this is package ‘S4Arrays’ version ‘1.6.0’ ** package ‘S4Arrays’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphqpMuF/R.INSTALL1890da6f0ae2b8/S4Arrays/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_S4Arrays.c -o R_init_S4Arrays.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c abind.c -o abind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c array_selection.c -o array_selection.o array_selection.c:91:24: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 91 | static char *errmsg_buf() | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c dim_tuning_utils.c -o dim_tuning_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowsum.c -o rowsum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o S4Arrays.so R_init_S4Arrays.o S4Vectors_stubs.o abind.o array_selection.o dim_tuning_utils.o rowsum.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphqpMuF/R.INSTALL1890da6f0ae2b8/S4Arrays/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-S4Arrays/00new/S4Arrays/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘rowsum’ in package ‘S4Arrays’ Creating a new generic function for ‘abind’ in package ‘S4Arrays’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (S4Arrays) begin installing package ‘SparseArray’ * installing *source* package ‘ggforce’ ... ** this is package ‘ggforce’ version ‘0.4.2’ ** package ‘ggforce’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpPsOWvj/R.INSTALL188b812e2fc671/ggforce/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c bSpline.cpp -o bSpline.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c bezier.cpp -o bezier.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c deBoor.cpp -o deBoor.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c ellipseEnclose.cpp -o ellipseEnclose.o In file included from ellipseEnclose.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from ellipseEnclose.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from ellipseEnclose.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from ellipseEnclose.cpp:2: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c enclose.cpp -o enclose.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pointPath.cpp -o pointPath.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ggforce.so RcppExports.o bSpline.o bezier.o deBoor.o ellipseEnclose.o enclose.o pointPath.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpPsOWvj/R.INSTALL188b812e2fc671/ggforce/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ggforce/00new/ggforce/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggforce) * installing *source* package ‘rmarkdown’ ... ** this is package ‘rmarkdown’ version ‘2.29’ ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmarkdown) begin installing package ‘htmlwidgets’ begin installing package ‘prettydoc’ * installing *source* package ‘RSQLite’ ... ** this is package ‘RSQLite’ version ‘2.3.9’ ** package ‘RSQLite’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmptOKPsr/R.INSTALL18820b2a5c4dd0/RSQLite/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbColumn.cpp -o DbColumn.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbColumnDataSource.cpp -o DbColumnDataSource.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbColumnDataSourceFactory.cpp -o DbColumnDataSourceFactory.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbColumnStorage.cpp -o DbColumnStorage.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbConnection.cpp -o DbConnection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbDataFrame.cpp -o DbDataFrame.o In file included from DbDataFrame.cpp:7: vendor/boost/bind.hpp:36:1: warning: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior. [-W#pragma-messages] 36 | BOOST_PRAGMA_MESSAGE( | ^ vendor/boost/config/pragma_message.hpp:24:34: note: expanded from macro 'BOOST_PRAGMA_MESSAGE' 24 | # define BOOST_PRAGMA_MESSAGE(x) _Pragma(BOOST_STRINGIZE(message(x))) | ^ :200:2: note: expanded from here 200 | message("The practice of declaring the Bind placeholders (_1, _2, ...) " "in the global namespace is deprecated. Please use " " + using namespace boost::placeholders, " "or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.") | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DbResult.cpp -o DbResult.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SqliteColumnDataSource.cpp -o SqliteColumnDataSource.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SqliteColumnDataSourceFactory.cpp -o SqliteColumnDataSourceFactory.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SqliteDataFrame.cpp -o SqliteDataFrame.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SqliteResult.cpp -o SqliteResult.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c SqliteResultImpl.cpp -o SqliteResultImpl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c affinity.c -o affinity.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c connection.cpp -o connection.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ext-csv.c -o ext-csv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ext-math.c -o ext-math.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ext-regexp.c -o ext-regexp.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ext-series.c -o ext-series.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c ext-uuid.c -o ext-uuid.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c extensions.cpp -o extensions.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c import-file.c -o import-file.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c result.cpp -o result.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c rsqlite.cpp -o rsqlite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/plogr/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/sqlite3/sqlite3.c -o vendor/sqlite3/sqlite3.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o RSQLite.so DbColumn.o DbColumnDataSource.o DbColumnDataSourceFactory.o DbColumnStorage.o DbConnection.o DbDataFrame.o DbResult.o SqliteColumnDataSource.o SqliteColumnDataSourceFactory.o SqliteDataFrame.o SqliteResult.o SqliteResultImpl.o affinity.o connection.o cpp11.o ext-csv.o ext-math.o ext-regexp.o ext-series.o ext-uuid.o extensions.o import-file.o result.o rsqlite.o vendor/sqlite3/sqlite3.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmptOKPsr/R.INSTALL18820b2a5c4dd0/RSQLite/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-RSQLite/00new/RSQLite/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RSQLite) * installing *source* package ‘prettydoc’ ... ** this is package ‘prettydoc’ version ‘0.4.1’ ** package ‘prettydoc’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (prettydoc) * installing *source* package ‘htmlwidgets’ ... ** this is package ‘htmlwidgets’ version ‘1.6.4’ ** package ‘htmlwidgets’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmlwidgets) begin installing package ‘htmlTable’ begin installing package ‘plotly’ * installing *source* package ‘ComplexHeatmap’ ... ** this is package ‘ComplexHeatmap’ version ‘2.22.0’ ** package ‘ComplexHeatmap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ComplexHeatmap) begin installing package ‘spiralize’ * installing *source* package ‘htmlTable’ ... ** this is package ‘htmlTable’ version ‘2.4.3’ ** package ‘htmlTable’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (htmlTable) begin installing package ‘Hmisc’ * installing *source* package ‘car’ ... ** this is package ‘car’ version ‘3.1-3’ ** package ‘car’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (car) begin installing package ‘rstatix’ * installing *source* package ‘plotly’ ... ** this is package ‘plotly’ version ‘4.10.4’ ** package ‘plotly’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plotly) begin installing package ‘ggalt’ * installing *source* package ‘spiralize’ ... ** this is package ‘spiralize’ version ‘1.1.0’ ** package ‘spiralize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spiralize) * installing *source* package ‘GenomicRanges’ ... ** this is package ‘GenomicRanges’ version ‘1.58.0’ ** package ‘GenomicRanges’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLFOET6/R.INSTALL1893f872f57a8e/GenomicRanges/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_GenomicRanges.c -o R_init_GenomicRanges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c transcript_utils.c -o transcript_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o GenomicRanges.so IRanges_stubs.o R_init_GenomicRanges.o S4Vectors_stubs.o transcript_utils.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLFOET6/R.INSTALL1893f872f57a8e/GenomicRanges/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-GenomicRanges/00new/GenomicRanges/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GenomicRanges) * installing *source* package ‘rstatix’ ... ** this is package ‘rstatix’ version ‘0.7.2’ ** package ‘rstatix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rstatix) begin installing package ‘ggpubr’ * installing *source* package ‘ggalt’ ... ** this is package ‘ggalt’ version ‘0.4.0’ ** package ‘ggalt’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggalt) * installing *source* package ‘Biostrings’ ... ** this is package ‘Biostrings’ version ‘2.74.1’ ** package ‘Biostrings’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpmWyozE/R.INSTALL1893f62d6444/Biostrings/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c BAB_class.c -o BAB_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c BitMatrix.c -o BitMatrix.o BitMatrix.c:299:13: warning: unused function 'BitMatrix_print' [-Wunused-function] 299 | static void BitMatrix_print(BitMatrix *bitmat) | ^~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c MIndex_class.c -o MIndex_class.o MIndex_class.c:184:20: warning: unused variable 'poffsets_order' [-Wunused-variable] 184 | IntAE *poffsets, *poffsets_order; | ^~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c PreprocessedTB_class.c -o PreprocessedTB_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_Biostrings.c -o R_init_Biostrings.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c RoSeqs_utils.c -o RoSeqs_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c SparseList_utils.c -o SparseList_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XStringSetList_class.c -o XStringSetList_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XStringSet_class.c -o XStringSet_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XString_class.c -o XString_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c XVector_stubs.c -o XVector_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c find_palindromes.c -o find_palindromes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c gtestsim.c -o gtestsim.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c inject_code.c -o inject_code.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c letter_frequency.c -o letter_frequency.o letter_frequency.c:957:48: warning: unused variable 'x_pos' [-Wunused-variable] 957 | int x_width, y_width, x_length, *ans_mat, i, x_pos; | ^~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c lowlevel_matching.c -o lowlevel_matching.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_PWM.c -o match_PWM.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pattern.c -o match_pattern.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pattern_boyermoore.c -o match_pattern_boyermoore.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pattern_indels.c -o match_pattern_indels.o match_pattern_indels.c:7:13: warning: unused function 'test_match_pattern_indels' [-Wunused-function] 7 | static void test_match_pattern_indels(const char *p, const char *s, | ^~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pattern_shiftor.c -o match_pattern_shiftor.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pdict.c -o match_pdict.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pdict_ACtree2.c -o match_pdict_ACtree2.o match_pdict_ACtree2.c:1031:10: warning: variable 'node0' set but not used [-Wunused-but-set-variable] 1031 | ACnode *node0, *node1, *node2; | ^ match_pdict_ACtree2.c:1076:10: warning: variable 'node0' set but not used [-Wunused-but-set-variable] 1076 | ACnode *node0, *node1, *node2; | ^ match_pdict_ACtree2.c:139:13: warning: unused function 'debug_node_counting_functions' [-Wunused-function] 139 | static void debug_node_counting_functions(int maxdepth) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ match_pdict_ACtree2.c:602:21: warning: unused function 'a_nice_max_nodeextbuf_nelt' [-Wunused-function] 602 | static unsigned int a_nice_max_nodeextbuf_nelt(int nnodes) | ^~~~~~~~~~~~~~~~~~~~~~~~~~ 4 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pdict_Twobit.c -o match_pdict_Twobit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_pdict_utils.c -o match_pdict_utils.o match_pdict_utils.c:653:49: warning: unused variable 'ncol' [-Wunused-variable] 653 | int nelt, min_safe_tb_end, max_safe_tb_end, j, ncol; | ^~~~ match_pdict_utils.c:713:6: warning: unused variable 'nelt' [-Wunused-variable] 713 | int nelt, nkey0, nkey1, nkey2, i, key; | ^~~~ match_pdict_utils.c:819:20: warning: unused variable 'ndup' [-Wunused-variable] 819 | unsigned long int ndup, nloci, NFC; // NFC = Number of Flank Comparisons | ^~~~ match_pdict_utils.c:819:26: warning: unused variable 'nloci' [-Wunused-variable] 819 | unsigned long int ndup, nloci, NFC; // NFC = Number of Flank Comparisons | ^~~~~ match_pdict_utils.c:819:33: warning: unused variable 'NFC' [-Wunused-variable] 819 | unsigned long int ndup, nloci, NFC; // NFC = Number of Flank Comparisons | ^~~ match_pdict_utils.c:820:27: warning: unused variable 'total_NFC' [-Wunused-variable] 820 | static unsigned long int total_NFC = 0UL, subtotal_NFC = 0UL; | ^~~~~~~~~ match_pdict_utils.c:820:44: warning: unused variable 'subtotal_NFC' [-Wunused-variable] 820 | static unsigned long int total_NFC = 0UL, subtotal_NFC = 0UL; | ^~~~~~~~~~~~ match_pdict_utils.c:261:13: warning: unused function 'match_headtail_by_loc' [-Wunused-function] 261 | static void match_headtail_by_loc(const HeadTail *headtail, | ^~~~~~~~~~~~~~~~~~~~~ 8 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c match_reporting.c -o match_reporting.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c matchprobes.c -o matchprobes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pmatchPattern.c -o pmatchPattern.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_fasta_files.c -o read_fasta_files.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c read_fastq_files.c -o read_fastq_files.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c replaceAt.c -o replaceAt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c replace_letter_at.c -o replace_letter_at.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c strutils.c -o strutils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c translate.c -o translate.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c unstrsplit_methods.c -o unstrsplit_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c utils.c -o utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c xscat.c -o xscat.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Biostrings.so BAB_class.o BitMatrix.o IRanges_stubs.o MIndex_class.o PreprocessedTB_class.o R_init_Biostrings.o RoSeqs_utils.o S4Vectors_stubs.o SparseList_utils.o XStringSetList_class.o XStringSet_class.o XString_class.o XVector_stubs.o find_palindromes.o gtestsim.o inject_code.o letter_frequency.o lowlevel_matching.o match_PWM.o match_pattern.o match_pattern_boyermoore.o match_pattern_indels.o match_pattern_shiftor.o match_pdict.o match_pdict_ACtree2.o match_pdict_Twobit.o match_pdict_utils.o match_reporting.o matchprobes.o pmatchPattern.o read_fasta_files.o read_fastq_files.o replaceAt.o replace_letter_at.o strutils.o translate.o unstrsplit_methods.o utils.o xscat.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpmWyozE/R.INSTALL1893f62d6444/Biostrings/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Biostrings/00new/Biostrings/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading in method for ‘twoWayAlphabetFrequencyByQuality’ with signature ‘"QualityScaledXStringSet"’: no definition for class “QualityScaledXStringSet” Creating a new generic function for ‘strsplit’ in package ‘Biostrings’ Creating a generic function for ‘ls’ from package ‘base’ in package ‘Biostrings’ Creating a new generic function for ‘pattern’ in package ‘Biostrings’ Creating a new generic function for ‘offset’ in package ‘Biostrings’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Biostrings) begin installing package ‘KEGGREST’ * installing *source* package ‘SparseArray’ ... ** this is package ‘SparseArray’ version ‘1.6.1’ ** package ‘SparseArray’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVZN6Vg/R.INSTALL18946a1561e493/SparseArray/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c ExtendableJaggedArray.c -o ExtendableJaggedArray.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c IRanges_stubs.c -o IRanges_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c OPBufTree.c -o OPBufTree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c R_init_SparseArray.c -o R_init_SparseArray.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c Rvector_summarization.c -o Rvector_summarization.o Rvector_summarization.c:1360:12: warning: unused function 'any_NA_list_elt' [-Wunused-function] 1360 | static int any_NA_list_elt(SEXP x) | ^~~~~~~~~~~~~~~ Rvector_summarization.c:1370:12: warning: unused function 'count_NA_list_elts' [-Wunused-function] 1370 | static int count_NA_list_elts(SEXP x) | ^~~~~~~~~~~~~~~~~~ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c Rvector_utils.c -o Rvector_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SBT_utils.c -o SBT_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SVT_SparseArray_class.c -o SVT_SparseArray_class.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Arith_methods.c -o SparseArray_Arith_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Compare_methods.c -o SparseArray_Compare_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Complex_methods.c -o SparseArray_Complex_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Logic_methods.c -o SparseArray_Logic_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_Math_methods.c -o SparseArray_Math_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_abind.c -o SparseArray_abind.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_aperm.c -o SparseArray_aperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_dim_tuning.c -o SparseArray_dim_tuning.o SparseArray_dim_tuning.c:141:37: warning: a function declaration without a prototype is deprecated in all versions of C [-Wstrict-prototypes] 141 | static SEXP make_scalar_lacunar_leaf() | ^ | void 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_matrixStats.c -o SparseArray_matrixStats.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_misc_methods.c -o SparseArray_misc_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_subassignment.c -o SparseArray_subassignment.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_subassignment_OLD.c -o SparseArray_subassignment_OLD.o SparseArray_subassignment_OLD.c:245:19: warning: unused function 'descend_to_bottom_by_coords0' [-Wunused-function] 245 | static inline int descend_to_bottom_by_coords0(SEXP SVT, SEXP SVT0, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_subsetting.c -o SparseArray_subsetting.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseArray_summarization.c -o SparseArray_summarization.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseMatrix_mult.c -o SparseMatrix_mult.o SparseMatrix_mult.c:306:13: warning: unused function 'crossprod2_doubleSV_doublemat' [-Wunused-function] 306 | static void crossprod2_doubleSV_doublemat( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ SparseMatrix_mult.c:346:13: warning: unused function 'crossprod2_doublemat_doubleSV' [-Wunused-function] 346 | static void crossprod2_doublemat_doubleSV( | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2 warnings generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec.c -o SparseVec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Arith.c -o SparseVec_Arith.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Compare.c -o SparseVec_Compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Logic.c -o SparseVec_Logic.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_Math.c -o SparseVec_Math.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c SparseVec_dotprod.c -o SparseVec_dotprod.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c XVector_stubs.c -o XVector_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c argcheck_utils.c -o argcheck_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c coerceVector2.c -o coerceVector2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c leaf_utils.c -o leaf_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c randomSparseArray.c -o randomSparseArray.o randomSparseArray.c:42:19: warning: unused function 'binary_find_interval' [-Wunused-function] 42 | static inline int binary_find_interval(double u, | ^~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c readSparseCSV.c -o readSparseCSV.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c rowsum_methods.c -o rowsum_methods.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c sparseMatrix_utils.c -o sparseMatrix_utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c test.c -o test.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/IRanges/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/XVector/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c thread_control.c -o thread_control.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o SparseArray.so ExtendableJaggedArray.o IRanges_stubs.o OPBufTree.o R_init_SparseArray.o Rvector_summarization.o Rvector_utils.o S4Vectors_stubs.o SBT_utils.o SVT_SparseArray_class.o SparseArray_Arith_methods.o SparseArray_Compare_methods.o SparseArray_Complex_methods.o SparseArray_Logic_methods.o SparseArray_Math_methods.o SparseArray_abind.o SparseArray_aperm.o SparseArray_dim_tuning.o SparseArray_matrixStats.o SparseArray_misc_methods.o SparseArray_subassignment.o SparseArray_subassignment_OLD.o SparseArray_subsetting.o SparseArray_summarization.o SparseMatrix_mult.o SparseVec.o SparseVec_Arith.o SparseVec_Compare.o SparseVec_Logic.o SparseVec_Math.o SparseVec_dotprod.o XVector_stubs.o argcheck_utils.o coerceVector2.o leaf_utils.o randomSparseArray.o readSparseCSV.o rowsum_methods.o sparseMatrix_utils.o test.o thread_control.o -fopenmp -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVZN6Vg/R.INSTALL18946a1561e493/SparseArray/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-SparseArray/00new/SparseArray/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SparseArray) begin installing package ‘DelayedArray’ * installing *source* package ‘ggpubr’ ... ** this is package ‘ggpubr’ version ‘0.6.0’ ** package ‘ggpubr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggpubr) * installing *source* package ‘KEGGREST’ ... ** this is package ‘KEGGREST’ version ‘1.46.0’ ** package ‘KEGGREST’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (KEGGREST) begin installing package ‘AnnotationDbi’ * installing *source* package ‘igraph’ ... ** this is package ‘igraph’ version ‘2.1.4’ ** package ‘igraph’ successfully unpacked and MD5 sums checked ** using staged installation libxml2 include directories: -I/usr/include/libxml2 libxml2 library link flags: -lxml2 Using installed GLPK ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpiE7VTP/R.INSTALL187fbc67ef9537/igraph/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpprinterface.cpp -o cpprinterface.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c init.cpp -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rinterface.c -o rinterface.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rinterface_extra.c -o rinterface_extra.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c rrandom.c -o rrandom.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c simpleraytracer.cpp -o simpleraytracer.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dgetv0.f -o vendor/arpack/dgetv0.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dlaqrb.f -o vendor/arpack/dlaqrb.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dmout.f -o vendor/arpack/dmout.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnaitr.f -o vendor/arpack/dnaitr.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnapps.f -o vendor/arpack/dnapps.o ./vendor/arpack/dnapps.f:342:19: warning: Reference to the procedure 'igraphdvout' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call igraphdvout (logfil, 1, h(i+1,i), ndigit, ^ ./vendor/arpack/dnapps.f:271:13: previous reference to 'igraphdvout' call igraphdvout (logfil, 1, [sigmar], ndigit, ^ ./vendor/arpack/dnapps.f:593:10: warning: Reference to the procedure 'dgemv' has an implicit interface that is distinct from another reference: incompatible dummy argument #10: incompatible dummy data object shapes call dgemv ('N', n, kplusp-i+1, one, v, ldv, ^ ./vendor/arpack/dnapps.f:584:11: previous reference to 'dgemv' & call dgemv ('N', n, kplusp, one, v, ldv, q(1,kev+1), 1, zero, ^ ./vendor/arpack/dnapps.f:624:10: warning: Reference to the procedure 'igraphdvout' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call igraphdvout (logfil, 1, q(kplusp,kev), ndigit, ^ ./vendor/arpack/dnapps.f:271:13: previous reference to 'igraphdvout' call igraphdvout (logfil, 1, [sigmar], ndigit, ^ ./vendor/arpack/dnapps.f:626:10: warning: Reference to the procedure 'igraphdvout' has an implicit interface that is distinct from another reference: incompatible dummy argument #3: incompatible dummy data object shapes call igraphdvout (logfil, 1, h(kev+1,kev), ndigit, ^ ./vendor/arpack/dnapps.f:271:13: previous reference to 'igraphdvout' call igraphdvout (logfil, 1, [sigmar], ndigit, ^ flang-new-19 -fpic -g -O2 -c vendor/arpack/dnaup2.f -o vendor/arpack/dnaup2.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnaupd.f -o vendor/arpack/dnaupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dnconv.f -o vendor/arpack/dnconv.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dneigh.f -o vendor/arpack/dneigh.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dneupd.f -o vendor/arpack/dneupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dngets.f -o vendor/arpack/dngets.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsaitr.f -o vendor/arpack/dsaitr.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsapps.f -o vendor/arpack/dsapps.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsaup2.f -o vendor/arpack/dsaup2.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsaupd.f -o vendor/arpack/dsaupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsconv.f -o vendor/arpack/dsconv.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dseigt.f -o vendor/arpack/dseigt.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsesrt.f -o vendor/arpack/dsesrt.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dseupd.f -o vendor/arpack/dseupd.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsgets.f -o vendor/arpack/dsgets.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsortc.f -o vendor/arpack/dsortc.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dsortr.f -o vendor/arpack/dsortr.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dstatn.f -o vendor/arpack/dstatn.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dstats.f -o vendor/arpack/dstats.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dstqrb.f -o vendor/arpack/dstqrb.o flang-new-19 -fpic -g -O2 -c vendor/arpack/dvout.f -o vendor/arpack/dvout.o flang-new-19 -fpic -g -O2 -c vendor/arpack/ivout.f -o vendor/arpack/ivout.o flang-new-19 -fpic -g -O2 -c vendor/arpack/second.f -o vendor/arpack/second.o flang-new-19 -fpic -g -O2 -c vendor/arpack/wrap.f -o vendor/arpack/wrap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/betweenness.c -o vendor/cigraph/src/centrality/betweenness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/centrality_other.c -o vendor/cigraph/src/centrality/centrality_other.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/centralization.c -o vendor/cigraph/src/centrality/centralization.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/closeness.c -o vendor/cigraph/src/centrality/closeness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/coreness.c -o vendor/cigraph/src/centrality/coreness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/eigenvector.c -o vendor/cigraph/src/centrality/eigenvector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/hub_authority.c -o vendor/cigraph/src/centrality/hub_authority.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/centrality/pagerank.c -o vendor/cigraph/src/centrality/pagerank.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack.cpp -o vendor/cigraph/src/centrality/prpack.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_base_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.cpp -o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_result.cpp -o vendor/cigraph/src/centrality/prpack/prpack_result.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_solver.cpp -o vendor/cigraph/src/centrality/prpack/prpack_solver.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/prpack/prpack_utils.cpp -o vendor/cigraph/src/centrality/prpack/prpack_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/centrality/truss.cpp -o vendor/cigraph/src/centrality/truss.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer/cliquer.c -o vendor/cigraph/src/cliques/cliquer/cliquer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer/cliquer_graph.c -o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer/reorder.c -o vendor/cigraph/src/cliques/cliquer/reorder.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliquer_wrapper.c -o vendor/cigraph/src/cliques/cliquer_wrapper.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/cliques.c -o vendor/cigraph/src/cliques/cliques.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/glet.c -o vendor/cigraph/src/cliques/glet.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/cliques/maximal_cliques.c -o vendor/cigraph/src/cliques/maximal_cliques.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/community_misc.c -o vendor/cigraph/src/community/community_misc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/edge_betweenness.c -o vendor/cigraph/src/community/edge_betweenness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/fast_modularity.c -o vendor/cigraph/src/community/fast_modularity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/fluid.c -o vendor/cigraph/src/community/fluid.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/infomap/infomap.cc -o vendor/cigraph/src/community/infomap/infomap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/infomap/infomap_FlowGraph.cc -o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/infomap/infomap_Greedy.cc -o vendor/cigraph/src/community/infomap/infomap_Greedy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/label_propagation.c -o vendor/cigraph/src/community/label_propagation.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/leading_eigenvector.c -o vendor/cigraph/src/community/leading_eigenvector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/leiden.c -o vendor/cigraph/src/community/leiden.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/louvain.c -o vendor/cigraph/src/community/louvain.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/modularity.c -o vendor/cigraph/src/community/modularity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/optimal_modularity.c -o vendor/cigraph/src/community/optimal_modularity.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/NetDataTypes.cpp -o vendor/cigraph/src/community/spinglass/NetDataTypes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/NetRoutines.cpp -o vendor/cigraph/src/community/spinglass/NetRoutines.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/clustertool.cpp -o vendor/cigraph/src/community/spinglass/clustertool.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/spinglass/pottsmodel_2.cpp -o vendor/cigraph/src/community/spinglass/pottsmodel_2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/community/voronoi.c -o vendor/cigraph/src/community/voronoi.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap.cpp -o vendor/cigraph/src/community/walktrap/walktrap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap_communities.cpp -o vendor/cigraph/src/community/walktrap/walktrap_communities.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap_graph.cpp -o vendor/cigraph/src/community/walktrap/walktrap_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/community/walktrap/walktrap_heap.cpp -o vendor/cigraph/src/community/walktrap/walktrap_heap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/cohesive_blocks.c -o vendor/cigraph/src/connectivity/cohesive_blocks.o vendor/cigraph/src/connectivity/cohesive_blocks.c:300:30: warning: variable 'kept' set but not used [-Wunused-but-set-variable] 300 | igraph_integer_t no, kept = 0; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/components.c -o vendor/cigraph/src/connectivity/components.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/reachability.c -o vendor/cigraph/src/connectivity/reachability.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/connectivity/separators.c -o vendor/cigraph/src/connectivity/separators.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/adjacency.c -o vendor/cigraph/src/constructors/adjacency.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/atlas.c -o vendor/cigraph/src/constructors/atlas.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/basic_constructors.c -o vendor/cigraph/src/constructors/basic_constructors.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/circulant.c -o vendor/cigraph/src/constructors/circulant.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/de_bruijn.c -o vendor/cigraph/src/constructors/de_bruijn.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/famous.c -o vendor/cigraph/src/constructors/famous.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/full.c -o vendor/cigraph/src/constructors/full.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/generalized_petersen.c -o vendor/cigraph/src/constructors/generalized_petersen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/kautz.c -o vendor/cigraph/src/constructors/kautz.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/lattices.c -o vendor/cigraph/src/constructors/lattices.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/lcf.c -o vendor/cigraph/src/constructors/lcf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/linegraph.c -o vendor/cigraph/src/constructors/linegraph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/prufer.c -o vendor/cigraph/src/constructors/prufer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/regular.c -o vendor/cigraph/src/constructors/regular.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/constructors/trees.c -o vendor/cigraph/src/constructors/trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/array.c -o vendor/cigraph/src/core/array.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/bitset.c -o vendor/cigraph/src/core/bitset.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/bitset_list.c -o vendor/cigraph/src/core/bitset_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/buckets.c -o vendor/cigraph/src/core/buckets.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/cutheap.c -o vendor/cigraph/src/core/cutheap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/dqueue.c -o vendor/cigraph/src/core/dqueue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/error.c -o vendor/cigraph/src/core/error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/estack.c -o vendor/cigraph/src/core/estack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/fixed_vectorlist.c -o vendor/cigraph/src/core/fixed_vectorlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/genheap.c -o vendor/cigraph/src/core/genheap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/grid.c -o vendor/cigraph/src/core/grid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/heap.c -o vendor/cigraph/src/core/heap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/indheap.c -o vendor/cigraph/src/core/indheap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/interruption.c -o vendor/cigraph/src/core/interruption.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/marked_queue.c -o vendor/cigraph/src/core/marked_queue.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/matrix.c -o vendor/cigraph/src/core/matrix.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/matrix_list.c -o vendor/cigraph/src/core/matrix_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/memory.c -o vendor/cigraph/src/core/memory.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/printing.c -o vendor/cigraph/src/core/printing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/progress.c -o vendor/cigraph/src/core/progress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/psumtree.c -o vendor/cigraph/src/core/psumtree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/set.c -o vendor/cigraph/src/core/set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/sparsemat.c -o vendor/cigraph/src/core/sparsemat.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/stack.c -o vendor/cigraph/src/core/stack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/statusbar.c -o vendor/cigraph/src/core/statusbar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/strvector.c -o vendor/cigraph/src/core/strvector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/trie.c -o vendor/cigraph/src/core/trie.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/vector.c -o vendor/cigraph/src/core/vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/vector_list.c -o vendor/cigraph/src/core/vector_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/core/vector_ptr.c -o vendor/cigraph/src/core/vector_ptr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/flow/flow.c -o vendor/cigraph/src/flow/flow.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/flow/flow_conversion.c -o vendor/cigraph/src/flow/flow_conversion.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/flow/st-cuts.c -o vendor/cigraph/src/flow/st-cuts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/barabasi.c -o vendor/cigraph/src/games/barabasi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/callaway_traits.c -o vendor/cigraph/src/games/callaway_traits.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/chung_lu.c -o vendor/cigraph/src/games/chung_lu.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/citations.c -o vendor/cigraph/src/games/citations.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/correlated.c -o vendor/cigraph/src/games/correlated.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/degree_sequence.c -o vendor/cigraph/src/games/degree_sequence.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:271:19: warning: variable 'cost' set but not used [-Wunused-but-set-variable] 271 | unsigned long cost = 0; | ^ vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:290:12: warning: variable 'avg_K' set but not used [-Wunused-but-set-variable] 290 | double avg_K = 0; | ^ vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.cpp:291:12: warning: variable 'avg_T' set but not used [-Wunused-but-set-variable] 291 | double avg_T = 0; | ^ 3 warnings generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.cpp -o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/dotproduct.c -o vendor/cigraph/src/games/dotproduct.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/erdos_renyi.c -o vendor/cigraph/src/games/erdos_renyi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/establishment.c -o vendor/cigraph/src/games/establishment.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/forestfire.c -o vendor/cigraph/src/games/forestfire.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/grg.c -o vendor/cigraph/src/games/grg.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/growing_random.c -o vendor/cigraph/src/games/growing_random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/islands.c -o vendor/cigraph/src/games/islands.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/k_regular.c -o vendor/cigraph/src/games/k_regular.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/preference.c -o vendor/cigraph/src/games/preference.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/recent_degree.c -o vendor/cigraph/src/games/recent_degree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/sbm.c -o vendor/cigraph/src/games/sbm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/static_fitness.c -o vendor/cigraph/src/games/static_fitness.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/tree.c -o vendor/cigraph/src/games/tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/games/watts_strogatz.c -o vendor/cigraph/src/games/watts_strogatz.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/adjlist.c -o vendor/cigraph/src/graph/adjlist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/attributes.c -o vendor/cigraph/src/graph/attributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/basic_query.c -o vendor/cigraph/src/graph/basic_query.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/caching.c -o vendor/cigraph/src/graph/caching.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/cattributes.c -o vendor/cigraph/src/graph/cattributes.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/graph_list.c -o vendor/cigraph/src/graph/graph_list.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/iterators.c -o vendor/cigraph/src/graph/iterators.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/type_common.c -o vendor/cigraph/src/graph/type_common.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/type_indexededgelist.c -o vendor/cigraph/src/graph/type_indexededgelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/graph/visitors.c -o vendor/cigraph/src/graph/visitors.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/hrg/hrg.cc -o vendor/cigraph/src/hrg/hrg.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/hrg/hrg_types.cc -o vendor/cigraph/src/hrg/hrg_types.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/glpk_support.c -o vendor/cigraph/src/internal/glpk_support.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/hacks.c -o vendor/cigraph/src/internal/hacks.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/lsap.c -o vendor/cigraph/src/internal/lsap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/qsort.c -o vendor/cigraph/src/internal/qsort.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/qsort_r.c -o vendor/cigraph/src/internal/qsort_r.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/utils.c -o vendor/cigraph/src/internal/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/internal/zeroin.c -o vendor/cigraph/src/internal/zeroin.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/dimacs.c -o vendor/cigraph/src/io/dimacs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/dl.c -o vendor/cigraph/src/io/dl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/dot.c -o vendor/cigraph/src/io/dot.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/edgelist.c -o vendor/cigraph/src/io/edgelist.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/gml-tree.c -o vendor/cigraph/src/io/gml-tree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/gml.c -o vendor/cigraph/src/io/gml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/graphdb.c -o vendor/cigraph/src/io/graphdb.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/graphml.c -o vendor/cigraph/src/io/graphml.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/leda.c -o vendor/cigraph/src/io/leda.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/lgl.c -o vendor/cigraph/src/io/lgl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/ncol.c -o vendor/cigraph/src/io/ncol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/pajek.c -o vendor/cigraph/src/io/pajek.o vendor/cigraph/src/io/pajek.c:524:22: warning: variable 'notop' set but not used [-Wunused-but-set-variable] 524 | igraph_integer_t notop = 0, nobottom = 0; | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/io/parse_utils.c -o vendor/cigraph/src/io/parse_utils.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss.cc -o vendor/cigraph/src/isomorphism/bliss.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/defs.cc -o vendor/cigraph/src/isomorphism/bliss/defs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/graph.cc -o vendor/cigraph/src/isomorphism/bliss/graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/heap.cc -o vendor/cigraph/src/isomorphism/bliss/heap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/orbit.cc -o vendor/cigraph/src/isomorphism/bliss/orbit.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/partition.cc -o vendor/cigraph/src/isomorphism/bliss/partition.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/uintseqhash.cc -o vendor/cigraph/src/isomorphism/bliss/uintseqhash.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/isomorphism/bliss/utils.cc -o vendor/cigraph/src/isomorphism/bliss/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/isoclasses.c -o vendor/cigraph/src/isomorphism/isoclasses.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/isomorphism_misc.c -o vendor/cigraph/src/isomorphism/isomorphism_misc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/lad.c -o vendor/cigraph/src/isomorphism/lad.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/queries.c -o vendor/cigraph/src/isomorphism/queries.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/isomorphism/vf2.c -o vendor/cigraph/src/isomorphism/vf2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/circular.c -o vendor/cigraph/src/layout/circular.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/davidson_harel.c -o vendor/cigraph/src/layout/davidson_harel.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/DensityGrid.cpp -o vendor/cigraph/src/layout/drl/DensityGrid.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/DensityGrid_3d.cpp -o vendor/cigraph/src/layout/drl/DensityGrid_3d.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_graph.cpp -o vendor/cigraph/src/layout/drl/drl_graph.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_graph_3d.cpp -o vendor/cigraph/src/layout/drl/drl_graph_3d.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_layout.cpp -o vendor/cigraph/src/layout/drl/drl_layout.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_layout_3d.cpp -o vendor/cigraph/src/layout/drl/drl_layout_3d.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/layout/drl/drl_parse.cpp -o vendor/cigraph/src/layout/drl/drl_parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/fruchterman_reingold.c -o vendor/cigraph/src/layout/fruchterman_reingold.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/gem.c -o vendor/cigraph/src/layout/gem.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/graphopt.c -o vendor/cigraph/src/layout/graphopt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/kamada_kawai.c -o vendor/cigraph/src/layout/kamada_kawai.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/large_graph.c -o vendor/cigraph/src/layout/large_graph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/layout_bipartite.c -o vendor/cigraph/src/layout/layout_bipartite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/layout_grid.c -o vendor/cigraph/src/layout/layout_grid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/layout_random.c -o vendor/cigraph/src/layout/layout_random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/mds.c -o vendor/cigraph/src/layout/mds.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/merge_dla.c -o vendor/cigraph/src/layout/merge_dla.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/merge_grid.c -o vendor/cigraph/src/layout/merge_grid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/reingold_tilford.c -o vendor/cigraph/src/layout/reingold_tilford.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/sugiyama.c -o vendor/cigraph/src/layout/sugiyama.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/layout/umap.c -o vendor/cigraph/src/layout/umap.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/arpack.c -o vendor/cigraph/src/linalg/arpack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/blas.c -o vendor/cigraph/src/linalg/blas.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/eigen.c -o vendor/cigraph/src/linalg/eigen.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/linalg/lapack.c -o vendor/cigraph/src/linalg/lapack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/math/complex.c -o vendor/cigraph/src/math/complex.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/math/safe_intop.c -o vendor/cigraph/src/math/safe_intop.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/math/utils.c -o vendor/cigraph/src/math/utils.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/bipartite.c -o vendor/cigraph/src/misc/bipartite.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/chordality.c -o vendor/cigraph/src/misc/chordality.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/cocitation.c -o vendor/cigraph/src/misc/cocitation.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/coloring.c -o vendor/cigraph/src/misc/coloring.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/conversion.c -o vendor/cigraph/src/misc/conversion.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/cycle_bases.c -o vendor/cigraph/src/misc/cycle_bases.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/misc/degree_sequence.cpp -o vendor/cigraph/src/misc/degree_sequence.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/embedding.c -o vendor/cigraph/src/misc/embedding.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/feedback_arc_set.c -o vendor/cigraph/src/misc/feedback_arc_set.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/graphicality.c -o vendor/cigraph/src/misc/graphicality.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/matching.c -o vendor/cigraph/src/misc/matching.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/microscopic_update.c -o vendor/cigraph/src/misc/microscopic_update.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/mixing.c -o vendor/cigraph/src/misc/mixing.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/motifs.c -o vendor/cigraph/src/misc/motifs.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/cigraph/src/misc/order_cycle.cpp -o vendor/cigraph/src/misc/order_cycle.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/other.c -o vendor/cigraph/src/misc/other.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/power_law_fit.c -o vendor/cigraph/src/misc/power_law_fit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/scan.c -o vendor/cigraph/src/misc/scan.o vendor/cigraph/src/misc/scan.c:76:23: warning: unused function 'igraph_i_trans4_il_simplify' [-Wunused-function] 76 | static igraph_error_t igraph_i_trans4_il_simplify(const igraph_t *graph, igraph_inclist_t *il, | ^~~~~~~~~~~~~~~~~~~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/sir.c -o vendor/cigraph/src/misc/sir.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/misc/spanning_trees.c -o vendor/cigraph/src/misc/spanning_trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/add_edge.c -o vendor/cigraph/src/operators/add_edge.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/complementer.c -o vendor/cigraph/src/operators/complementer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/compose.c -o vendor/cigraph/src/operators/compose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/connect_neighborhood.c -o vendor/cigraph/src/operators/connect_neighborhood.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/contract.c -o vendor/cigraph/src/operators/contract.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/difference.c -o vendor/cigraph/src/operators/difference.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/disjoint_union.c -o vendor/cigraph/src/operators/disjoint_union.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/intersection.c -o vendor/cigraph/src/operators/intersection.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/join.c -o vendor/cigraph/src/operators/join.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/misc_internal.c -o vendor/cigraph/src/operators/misc_internal.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/permute.c -o vendor/cigraph/src/operators/permute.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/reverse.c -o vendor/cigraph/src/operators/reverse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/rewire.c -o vendor/cigraph/src/operators/rewire.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/rewire_edges.c -o vendor/cigraph/src/operators/rewire_edges.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/simplify.c -o vendor/cigraph/src/operators/simplify.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/subgraph.c -o vendor/cigraph/src/operators/subgraph.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/operators/union.c -o vendor/cigraph/src/operators/union.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/all_shortest_paths.c -o vendor/cigraph/src/paths/all_shortest_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/astar.c -o vendor/cigraph/src/paths/astar.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/bellman_ford.c -o vendor/cigraph/src/paths/bellman_ford.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/dijkstra.c -o vendor/cigraph/src/paths/dijkstra.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/distances.c -o vendor/cigraph/src/paths/distances.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/eulerian.c -o vendor/cigraph/src/paths/eulerian.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/floyd_warshall.c -o vendor/cigraph/src/paths/floyd_warshall.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/histogram.c -o vendor/cigraph/src/paths/histogram.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/johnson.c -o vendor/cigraph/src/paths/johnson.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/random_walk.c -o vendor/cigraph/src/paths/random_walk.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/shortest_paths.c -o vendor/cigraph/src/paths/shortest_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/simple_paths.c -o vendor/cigraph/src/paths/simple_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/sparsifier.c -o vendor/cigraph/src/paths/sparsifier.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/unweighted.c -o vendor/cigraph/src/paths/unweighted.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/voronoi.c -o vendor/cigraph/src/paths/voronoi.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/paths/widest_paths.c -o vendor/cigraph/src/paths/widest_paths.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/basic_properties.c -o vendor/cigraph/src/properties/basic_properties.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/complete.c -o vendor/cigraph/src/properties/complete.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/constraint.c -o vendor/cigraph/src/properties/constraint.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/convergence_degree.c -o vendor/cigraph/src/properties/convergence_degree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/dag.c -o vendor/cigraph/src/properties/dag.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/degrees.c -o vendor/cigraph/src/properties/degrees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/ecc.c -o vendor/cigraph/src/properties/ecc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/girth.c -o vendor/cigraph/src/properties/girth.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/loops.c -o vendor/cigraph/src/properties/loops.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/multiplicity.c -o vendor/cigraph/src/properties/multiplicity.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/neighborhood.c -o vendor/cigraph/src/properties/neighborhood.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/perfect.c -o vendor/cigraph/src/properties/perfect.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/spectral.c -o vendor/cigraph/src/properties/spectral.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/trees.c -o vendor/cigraph/src/properties/trees.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/properties/triangles.c -o vendor/cigraph/src/properties/triangles.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/random.c -o vendor/cigraph/src/random/random.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_glibc2.c -o vendor/cigraph/src/random/rng_glibc2.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_mt19937.c -o vendor/cigraph/src/random/rng_mt19937.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_pcg32.c -o vendor/cigraph/src/random/rng_pcg32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/random/rng_pcg64.c -o vendor/cigraph/src/random/rng_pcg64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/src/version.c -o vendor/cigraph/src/version.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_add.c -o vendor/cigraph/vendor/cs/cs_add.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_amd.c -o vendor/cigraph/vendor/cs/cs_amd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_chol.c -o vendor/cigraph/vendor/cs/cs_chol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_cholsol.c -o vendor/cigraph/vendor/cs/cs_cholsol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_compress.c -o vendor/cigraph/vendor/cs/cs_compress.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_counts.c -o vendor/cigraph/vendor/cs/cs_counts.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_cumsum.c -o vendor/cigraph/vendor/cs/cs_cumsum.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dfs.c -o vendor/cigraph/vendor/cs/cs_dfs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dmperm.c -o vendor/cigraph/vendor/cs/cs_dmperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_droptol.c -o vendor/cigraph/vendor/cs/cs_droptol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dropzeros.c -o vendor/cigraph/vendor/cs/cs_dropzeros.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_dupl.c -o vendor/cigraph/vendor/cs/cs_dupl.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_entry.c -o vendor/cigraph/vendor/cs/cs_entry.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_ereach.c -o vendor/cigraph/vendor/cs/cs_ereach.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_etree.c -o vendor/cigraph/vendor/cs/cs_etree.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_fkeep.c -o vendor/cigraph/vendor/cs/cs_fkeep.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_gaxpy.c -o vendor/cigraph/vendor/cs/cs_gaxpy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_happly.c -o vendor/cigraph/vendor/cs/cs_happly.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_house.c -o vendor/cigraph/vendor/cs/cs_house.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_ipvec.c -o vendor/cigraph/vendor/cs/cs_ipvec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_leaf.c -o vendor/cigraph/vendor/cs/cs_leaf.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_load.c -o vendor/cigraph/vendor/cs/cs_load.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_lsolve.c -o vendor/cigraph/vendor/cs/cs_lsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_ltsolve.c -o vendor/cigraph/vendor/cs/cs_ltsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_lu.c -o vendor/cigraph/vendor/cs/cs_lu.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_lusol.c -o vendor/cigraph/vendor/cs/cs_lusol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_malloc.c -o vendor/cigraph/vendor/cs/cs_malloc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_maxtrans.c -o vendor/cigraph/vendor/cs/cs_maxtrans.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_multiply.c -o vendor/cigraph/vendor/cs/cs_multiply.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_norm.c -o vendor/cigraph/vendor/cs/cs_norm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_permute.c -o vendor/cigraph/vendor/cs/cs_permute.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_pinv.c -o vendor/cigraph/vendor/cs/cs_pinv.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_post.c -o vendor/cigraph/vendor/cs/cs_post.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_print.c -o vendor/cigraph/vendor/cs/cs_print.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_pvec.c -o vendor/cigraph/vendor/cs/cs_pvec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_qr.c -o vendor/cigraph/vendor/cs/cs_qr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_qrsol.c -o vendor/cigraph/vendor/cs/cs_qrsol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_randperm.c -o vendor/cigraph/vendor/cs/cs_randperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_reach.c -o vendor/cigraph/vendor/cs/cs_reach.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_scatter.c -o vendor/cigraph/vendor/cs/cs_scatter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_scc.c -o vendor/cigraph/vendor/cs/cs_scc.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_schol.c -o vendor/cigraph/vendor/cs/cs_schol.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_spsolve.c -o vendor/cigraph/vendor/cs/cs_spsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_sqr.c -o vendor/cigraph/vendor/cs/cs_sqr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_symperm.c -o vendor/cigraph/vendor/cs/cs_symperm.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_tdfs.c -o vendor/cigraph/vendor/cs/cs_tdfs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_transpose.c -o vendor/cigraph/vendor/cs/cs_transpose.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_updown.c -o vendor/cigraph/vendor/cs/cs_updown.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_usolve.c -o vendor/cigraph/vendor/cs/cs_usolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_util.c -o vendor/cigraph/vendor/cs/cs_util.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/cs/cs_utsolve.c -o vendor/cigraph/vendor/cs/cs_utsolve.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-advance-128.c -o vendor/cigraph/vendor/pcg/pcg-advance-128.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-advance-64.c -o vendor/cigraph/vendor/pcg/pcg-advance-64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-output-128.c -o vendor/cigraph/vendor/pcg/pcg-output-128.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-output-32.c -o vendor/cigraph/vendor/pcg/pcg-output-32.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-output-64.c -o vendor/cigraph/vendor/pcg/pcg-output-64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-rngs-128.c -o vendor/cigraph/vendor/pcg/pcg-rngs-128.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/pcg/pcg-rngs-64.c -o vendor/cigraph/vendor/pcg/pcg-rngs-64.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/gss.c -o vendor/cigraph/vendor/plfit/gss.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/hzeta.c -o vendor/cigraph/vendor/plfit/hzeta.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/kolmogorov.c -o vendor/cigraph/vendor/plfit/kolmogorov.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/lbfgs.c -o vendor/cigraph/vendor/plfit/lbfgs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/mt.c -o vendor/cigraph/vendor/plfit/mt.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/options.c -o vendor/cigraph/vendor/plfit/options.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/platform.c -o vendor/cigraph/vendor/plfit/platform.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/plfit.c -o vendor/cigraph/vendor/plfit/plfit.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/plfit_error.c -o vendor/cigraph/vendor/plfit/plfit_error.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/rbinom.c -o vendor/cigraph/vendor/plfit/rbinom.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/plfit/sampling.c -o vendor/cigraph/vendor/plfit/sampling.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/dl-lexer.c -o vendor/io/dl-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/dl-parser.c -o vendor/io/dl-parser.o src/vendor/io/dl-parser.c:1376:9: warning: variable 'igraph_dl_yynerrs' set but not used [-Wunused-but-set-variable] 1376 | int yynerrs = 0; | ^ vendor/io/dl-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_dl_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/gml-lexer.c -o vendor/io/gml-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/gml-parser.c -o vendor/io/gml-parser.o src/vendor/io/gml-parser.c:1294:9: warning: variable 'igraph_gml_yynerrs' set but not used [-Wunused-but-set-variable] 1294 | int yynerrs = 0; | ^ vendor/io/gml-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_gml_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/lgl-lexer.c -o vendor/io/lgl-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/lgl-parser.c -o vendor/io/lgl-parser.o src/vendor/io/lgl-parser.c:1246:9: warning: variable 'igraph_lgl_yynerrs' set but not used [-Wunused-but-set-variable] 1246 | int yynerrs = 0; | ^ vendor/io/lgl-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_lgl_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/ncol-lexer.c -o vendor/io/ncol-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/ncol-parser.c -o vendor/io/ncol-parser.o src/vendor/io/ncol-parser.c:1239:9: warning: variable 'igraph_ncol_yynerrs' set but not used [-Wunused-but-set-variable] 1239 | int yynerrs = 0; | ^ vendor/io/ncol-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_ncol_yynerrs | ^ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/pajek-lexer.c -o vendor/io/pajek-lexer.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/io/pajek-parser.c -o vendor/io/pajek-parser.o src/vendor/io/pajek-parser.c:1531:9: warning: variable 'igraph_pajek_yynerrs' set but not used [-Wunused-but-set-variable] 1531 | int yynerrs = 0; | ^ vendor/io/pajek-parser.c:72:25: note: expanded from macro 'yynerrs' 72 | #define yynerrs igraph_pajek_yynerrs | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Color.cpp -o vendor/simpleraytracer/Color.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Light.cpp -o vendor/simpleraytracer/Light.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Point.cpp -o vendor/simpleraytracer/Point.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Ray.cpp -o vendor/simpleraytracer/Ray.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/RayTracer.cpp -o vendor/simpleraytracer/RayTracer.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/RayVector.cpp -o vendor/simpleraytracer/RayVector.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Shape.cpp -o vendor/simpleraytracer/Shape.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Sphere.cpp -o vendor/simpleraytracer/Sphere.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/Triangle.cpp -o vendor/simpleraytracer/Triangle.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c vendor/simpleraytracer/unit_limiter.cpp -o vendor/simpleraytracer/unit_limiter.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/R.c -o vendor/uuid/R.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/clear.c -o vendor/uuid/clear.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/compare.c -o vendor/uuid/compare.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/copy.c -o vendor/uuid/copy.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/gen_uuid.c -o vendor/uuid/gen_uuid.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/isnull.c -o vendor/uuid/isnull.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/pack.c -o vendor/uuid/pack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/parse.c -o vendor/uuid/parse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/unpack.c -o vendor/uuid/unpack.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/uuid/unparse.c -o vendor/uuid/unparse.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DUSING_R -I. -Ivendor -Ivendor/cigraph/src -Ivendor/cigraph/include -Ivendor/cigraph/vendor -Ivendor/io/parsers -I/usr/include/libxml2 -DHAVE_LIBXML -DNDEBUG -DNTIMER -DNPRINT -DIGRAPH_THREAD_LOCAL= -DPRPACK_IGRAPH_SUPPORT -DHAVE_GFORTRAN=1 -D_GNU_SOURCE=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fpic -g -O3 -Wall -pedantic -c vendor/cigraph/vendor/mini-gmp/mini-gmp.c -o vendor/cigraph/vendor/mini-gmp/mini-gmp.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o igraph.so cpp11.o cpprinterface.o init.o rinterface.o rinterface_extra.o rrandom.o simpleraytracer.o vendor/arpack/dgetv0.o vendor/arpack/dlaqrb.o vendor/arpack/dmout.o vendor/arpack/dnaitr.o vendor/arpack/dnapps.o vendor/arpack/dnaup2.o vendor/arpack/dnaupd.o vendor/arpack/dnconv.o vendor/arpack/dneigh.o vendor/arpack/dneupd.o vendor/arpack/dngets.o vendor/arpack/dsaitr.o vendor/arpack/dsapps.o vendor/arpack/dsaup2.o vendor/arpack/dsaupd.o vendor/arpack/dsconv.o vendor/arpack/dseigt.o vendor/arpack/dsesrt.o vendor/arpack/dseupd.o vendor/arpack/dsgets.o vendor/arpack/dsortc.o vendor/arpack/dsortr.o vendor/arpack/dstatn.o vendor/arpack/dstats.o vendor/arpack/dstqrb.o vendor/arpack/dvout.o vendor/arpack/ivout.o vendor/arpack/second.o vendor/arpack/wrap.o vendor/cigraph/src/centrality/betweenness.o vendor/cigraph/src/centrality/centrality_other.o vendor/cigraph/src/centrality/centralization.o vendor/cigraph/src/centrality/closeness.o vendor/cigraph/src/centrality/coreness.o vendor/cigraph/src/centrality/eigenvector.o vendor/cigraph/src/centrality/hub_authority.o vendor/cigraph/src/centrality/pagerank.o vendor/cigraph/src/centrality/prpack.o vendor/cigraph/src/centrality/prpack/prpack_base_graph.o vendor/cigraph/src/centrality/prpack/prpack_igraph_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_ge_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_gs_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_scc_graph.o vendor/cigraph/src/centrality/prpack/prpack_preprocessed_schur_graph.o vendor/cigraph/src/centrality/prpack/prpack_result.o vendor/cigraph/src/centrality/prpack/prpack_solver.o vendor/cigraph/src/centrality/prpack/prpack_utils.o vendor/cigraph/src/centrality/truss.o vendor/cigraph/src/cliques/cliquer/cliquer.o vendor/cigraph/src/cliques/cliquer/cliquer_graph.o vendor/cigraph/src/cliques/cliquer/reorder.o vendor/cigraph/src/cliques/cliquer_wrapper.o vendor/cigraph/src/cliques/cliques.o vendor/cigraph/src/cliques/glet.o vendor/cigraph/src/cliques/maximal_cliques.o vendor/cigraph/src/community/community_misc.o vendor/cigraph/src/community/edge_betweenness.o vendor/cigraph/src/community/fast_modularity.o vendor/cigraph/src/community/fluid.o vendor/cigraph/src/community/infomap/infomap.o vendor/cigraph/src/community/infomap/infomap_FlowGraph.o vendor/cigraph/src/community/infomap/infomap_Greedy.o vendor/cigraph/src/community/label_propagation.o vendor/cigraph/src/community/leading_eigenvector.o vendor/cigraph/src/community/leiden.o vendor/cigraph/src/community/louvain.o vendor/cigraph/src/community/modularity.o vendor/cigraph/src/community/optimal_modularity.o vendor/cigraph/src/community/spinglass/NetDataTypes.o vendor/cigraph/src/community/spinglass/NetRoutines.o vendor/cigraph/src/community/spinglass/clustertool.o vendor/cigraph/src/community/spinglass/pottsmodel_2.o vendor/cigraph/src/community/voronoi.o vendor/cigraph/src/community/walktrap/walktrap.o vendor/cigraph/src/community/walktrap/walktrap_communities.o vendor/cigraph/src/community/walktrap/walktrap_graph.o vendor/cigraph/src/community/walktrap/walktrap_heap.o vendor/cigraph/src/connectivity/cohesive_blocks.o vendor/cigraph/src/connectivity/components.o vendor/cigraph/src/connectivity/reachability.o vendor/cigraph/src/connectivity/separators.o vendor/cigraph/src/constructors/adjacency.o vendor/cigraph/src/constructors/atlas.o vendor/cigraph/src/constructors/basic_constructors.o vendor/cigraph/src/constructors/circulant.o vendor/cigraph/src/constructors/de_bruijn.o vendor/cigraph/src/constructors/famous.o vendor/cigraph/src/constructors/full.o vendor/cigraph/src/constructors/generalized_petersen.o vendor/cigraph/src/constructors/kautz.o vendor/cigraph/src/constructors/lattices.o vendor/cigraph/src/constructors/lcf.o vendor/cigraph/src/constructors/linegraph.o vendor/cigraph/src/constructors/prufer.o vendor/cigraph/src/constructors/regular.o vendor/cigraph/src/constructors/trees.o vendor/cigraph/src/core/array.o vendor/cigraph/src/core/bitset.o vendor/cigraph/src/core/bitset_list.o vendor/cigraph/src/core/buckets.o vendor/cigraph/src/core/cutheap.o vendor/cigraph/src/core/dqueue.o vendor/cigraph/src/core/error.o vendor/cigraph/src/core/estack.o vendor/cigraph/src/core/fixed_vectorlist.o vendor/cigraph/src/core/genheap.o vendor/cigraph/src/core/grid.o vendor/cigraph/src/core/heap.o vendor/cigraph/src/core/indheap.o vendor/cigraph/src/core/interruption.o vendor/cigraph/src/core/marked_queue.o vendor/cigraph/src/core/matrix.o vendor/cigraph/src/core/matrix_list.o vendor/cigraph/src/core/memory.o vendor/cigraph/src/core/printing.o vendor/cigraph/src/core/progress.o vendor/cigraph/src/core/psumtree.o vendor/cigraph/src/core/set.o vendor/cigraph/src/core/sparsemat.o vendor/cigraph/src/core/stack.o vendor/cigraph/src/core/statusbar.o vendor/cigraph/src/core/strvector.o vendor/cigraph/src/core/trie.o vendor/cigraph/src/core/vector.o vendor/cigraph/src/core/vector_list.o vendor/cigraph/src/core/vector_ptr.o vendor/cigraph/src/flow/flow.o vendor/cigraph/src/flow/flow_conversion.o vendor/cigraph/src/flow/st-cuts.o vendor/cigraph/src/games/barabasi.o vendor/cigraph/src/games/callaway_traits.o vendor/cigraph/src/games/chung_lu.o vendor/cigraph/src/games/citations.o vendor/cigraph/src/games/correlated.o vendor/cigraph/src/games/degree_sequence.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_degree_sequence.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_hash.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_graph_molloy_optimized.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_mr-connected.o vendor/cigraph/src/games/degree_sequence_vl/gengraph_random.o vendor/cigraph/src/games/dotproduct.o vendor/cigraph/src/games/erdos_renyi.o vendor/cigraph/src/games/establishment.o vendor/cigraph/src/games/forestfire.o vendor/cigraph/src/games/grg.o vendor/cigraph/src/games/growing_random.o vendor/cigraph/src/games/islands.o vendor/cigraph/src/games/k_regular.o vendor/cigraph/src/games/preference.o vendor/cigraph/src/games/recent_degree.o vendor/cigraph/src/games/sbm.o vendor/cigraph/src/games/static_fitness.o vendor/cigraph/src/games/tree.o vendor/cigraph/src/games/watts_strogatz.o vendor/cigraph/src/graph/adjlist.o vendor/cigraph/src/graph/attributes.o vendor/cigraph/src/graph/basic_query.o vendor/cigraph/src/graph/caching.o vendor/cigraph/src/graph/cattributes.o vendor/cigraph/src/graph/graph_list.o vendor/cigraph/src/graph/iterators.o vendor/cigraph/src/graph/type_common.o vendor/cigraph/src/graph/type_indexededgelist.o vendor/cigraph/src/graph/visitors.o vendor/cigraph/src/hrg/hrg.o vendor/cigraph/src/hrg/hrg_types.o vendor/cigraph/src/internal/glpk_support.o vendor/cigraph/src/internal/hacks.o vendor/cigraph/src/internal/lsap.o vendor/cigraph/src/internal/qsort.o vendor/cigraph/src/internal/qsort_r.o vendor/cigraph/src/internal/utils.o vendor/cigraph/src/internal/zeroin.o vendor/cigraph/src/io/dimacs.o vendor/cigraph/src/io/dl.o vendor/cigraph/src/io/dot.o vendor/cigraph/src/io/edgelist.o vendor/cigraph/src/io/gml-tree.o vendor/cigraph/src/io/gml.o vendor/cigraph/src/io/graphdb.o vendor/cigraph/src/io/graphml.o vendor/cigraph/src/io/leda.o vendor/cigraph/src/io/lgl.o vendor/cigraph/src/io/ncol.o vendor/cigraph/src/io/pajek.o vendor/cigraph/src/io/parse_utils.o vendor/cigraph/src/isomorphism/bliss.o vendor/cigraph/src/isomorphism/bliss/defs.o vendor/cigraph/src/isomorphism/bliss/graph.o vendor/cigraph/src/isomorphism/bliss/heap.o vendor/cigraph/src/isomorphism/bliss/orbit.o vendor/cigraph/src/isomorphism/bliss/partition.o vendor/cigraph/src/isomorphism/bliss/uintseqhash.o vendor/cigraph/src/isomorphism/bliss/utils.o vendor/cigraph/src/isomorphism/isoclasses.o vendor/cigraph/src/isomorphism/isomorphism_misc.o vendor/cigraph/src/isomorphism/lad.o vendor/cigraph/src/isomorphism/queries.o vendor/cigraph/src/isomorphism/vf2.o vendor/cigraph/src/layout/circular.o vendor/cigraph/src/layout/davidson_harel.o vendor/cigraph/src/layout/drl/DensityGrid.o vendor/cigraph/src/layout/drl/DensityGrid_3d.o vendor/cigraph/src/layout/drl/drl_graph.o vendor/cigraph/src/layout/drl/drl_graph_3d.o vendor/cigraph/src/layout/drl/drl_layout.o vendor/cigraph/src/layout/drl/drl_layout_3d.o vendor/cigraph/src/layout/drl/drl_parse.o vendor/cigraph/src/layout/fruchterman_reingold.o vendor/cigraph/src/layout/gem.o vendor/cigraph/src/layout/graphopt.o vendor/cigraph/src/layout/kamada_kawai.o vendor/cigraph/src/layout/large_graph.o vendor/cigraph/src/layout/layout_bipartite.o vendor/cigraph/src/layout/layout_grid.o vendor/cigraph/src/layout/layout_random.o vendor/cigraph/src/layout/mds.o vendor/cigraph/src/layout/merge_dla.o vendor/cigraph/src/layout/merge_grid.o vendor/cigraph/src/layout/reingold_tilford.o vendor/cigraph/src/layout/sugiyama.o vendor/cigraph/src/layout/umap.o vendor/cigraph/src/linalg/arpack.o vendor/cigraph/src/linalg/blas.o vendor/cigraph/src/linalg/eigen.o vendor/cigraph/src/linalg/lapack.o vendor/cigraph/src/math/complex.o vendor/cigraph/src/math/safe_intop.o vendor/cigraph/src/math/utils.o vendor/cigraph/src/misc/bipartite.o vendor/cigraph/src/misc/chordality.o vendor/cigraph/src/misc/cocitation.o vendor/cigraph/src/misc/coloring.o vendor/cigraph/src/misc/conversion.o vendor/cigraph/src/misc/cycle_bases.o vendor/cigraph/src/misc/degree_sequence.o vendor/cigraph/src/misc/embedding.o vendor/cigraph/src/misc/feedback_arc_set.o vendor/cigraph/src/misc/graphicality.o vendor/cigraph/src/misc/matching.o vendor/cigraph/src/misc/microscopic_update.o vendor/cigraph/src/misc/mixing.o vendor/cigraph/src/misc/motifs.o vendor/cigraph/src/misc/order_cycle.o vendor/cigraph/src/misc/other.o vendor/cigraph/src/misc/power_law_fit.o vendor/cigraph/src/misc/scan.o vendor/cigraph/src/misc/sir.o vendor/cigraph/src/misc/spanning_trees.o vendor/cigraph/src/operators/add_edge.o vendor/cigraph/src/operators/complementer.o vendor/cigraph/src/operators/compose.o vendor/cigraph/src/operators/connect_neighborhood.o vendor/cigraph/src/operators/contract.o vendor/cigraph/src/operators/difference.o vendor/cigraph/src/operators/disjoint_union.o vendor/cigraph/src/operators/intersection.o vendor/cigraph/src/operators/join.o vendor/cigraph/src/operators/misc_internal.o vendor/cigraph/src/operators/permute.o vendor/cigraph/src/operators/reverse.o vendor/cigraph/src/operators/rewire.o vendor/cigraph/src/operators/rewire_edges.o vendor/cigraph/src/operators/simplify.o vendor/cigraph/src/operators/subgraph.o vendor/cigraph/src/operators/union.o vendor/cigraph/src/paths/all_shortest_paths.o vendor/cigraph/src/paths/astar.o vendor/cigraph/src/paths/bellman_ford.o vendor/cigraph/src/paths/dijkstra.o vendor/cigraph/src/paths/distances.o vendor/cigraph/src/paths/eulerian.o vendor/cigraph/src/paths/floyd_warshall.o vendor/cigraph/src/paths/histogram.o vendor/cigraph/src/paths/johnson.o vendor/cigraph/src/paths/random_walk.o vendor/cigraph/src/paths/shortest_paths.o vendor/cigraph/src/paths/simple_paths.o vendor/cigraph/src/paths/sparsifier.o vendor/cigraph/src/paths/unweighted.o vendor/cigraph/src/paths/voronoi.o vendor/cigraph/src/paths/widest_paths.o vendor/cigraph/src/properties/basic_properties.o vendor/cigraph/src/properties/complete.o vendor/cigraph/src/properties/constraint.o vendor/cigraph/src/properties/convergence_degree.o vendor/cigraph/src/properties/dag.o vendor/cigraph/src/properties/degrees.o vendor/cigraph/src/properties/ecc.o vendor/cigraph/src/properties/girth.o vendor/cigraph/src/properties/loops.o vendor/cigraph/src/properties/multiplicity.o vendor/cigraph/src/properties/neighborhood.o vendor/cigraph/src/properties/perfect.o vendor/cigraph/src/properties/spectral.o vendor/cigraph/src/properties/trees.o vendor/cigraph/src/properties/triangles.o vendor/cigraph/src/random/random.o vendor/cigraph/src/random/rng_glibc2.o vendor/cigraph/src/random/rng_mt19937.o vendor/cigraph/src/random/rng_pcg32.o vendor/cigraph/src/random/rng_pcg64.o vendor/cigraph/src/version.o vendor/cigraph/vendor/cs/cs_add.o vendor/cigraph/vendor/cs/cs_amd.o vendor/cigraph/vendor/cs/cs_chol.o vendor/cigraph/vendor/cs/cs_cholsol.o vendor/cigraph/vendor/cs/cs_compress.o vendor/cigraph/vendor/cs/cs_counts.o vendor/cigraph/vendor/cs/cs_cumsum.o vendor/cigraph/vendor/cs/cs_dfs.o vendor/cigraph/vendor/cs/cs_dmperm.o vendor/cigraph/vendor/cs/cs_droptol.o vendor/cigraph/vendor/cs/cs_dropzeros.o vendor/cigraph/vendor/cs/cs_dupl.o vendor/cigraph/vendor/cs/cs_entry.o vendor/cigraph/vendor/cs/cs_ereach.o vendor/cigraph/vendor/cs/cs_etree.o vendor/cigraph/vendor/cs/cs_fkeep.o vendor/cigraph/vendor/cs/cs_gaxpy.o vendor/cigraph/vendor/cs/cs_happly.o vendor/cigraph/vendor/cs/cs_house.o vendor/cigraph/vendor/cs/cs_ipvec.o vendor/cigraph/vendor/cs/cs_leaf.o vendor/cigraph/vendor/cs/cs_load.o vendor/cigraph/vendor/cs/cs_lsolve.o vendor/cigraph/vendor/cs/cs_ltsolve.o vendor/cigraph/vendor/cs/cs_lu.o vendor/cigraph/vendor/cs/cs_lusol.o vendor/cigraph/vendor/cs/cs_malloc.o vendor/cigraph/vendor/cs/cs_maxtrans.o vendor/cigraph/vendor/cs/cs_multiply.o vendor/cigraph/vendor/cs/cs_norm.o vendor/cigraph/vendor/cs/cs_permute.o vendor/cigraph/vendor/cs/cs_pinv.o vendor/cigraph/vendor/cs/cs_post.o vendor/cigraph/vendor/cs/cs_print.o vendor/cigraph/vendor/cs/cs_pvec.o vendor/cigraph/vendor/cs/cs_qr.o vendor/cigraph/vendor/cs/cs_qrsol.o vendor/cigraph/vendor/cs/cs_randperm.o vendor/cigraph/vendor/cs/cs_reach.o vendor/cigraph/vendor/cs/cs_scatter.o vendor/cigraph/vendor/cs/cs_scc.o vendor/cigraph/vendor/cs/cs_schol.o vendor/cigraph/vendor/cs/cs_spsolve.o vendor/cigraph/vendor/cs/cs_sqr.o vendor/cigraph/vendor/cs/cs_symperm.o vendor/cigraph/vendor/cs/cs_tdfs.o vendor/cigraph/vendor/cs/cs_transpose.o vendor/cigraph/vendor/cs/cs_updown.o vendor/cigraph/vendor/cs/cs_usolve.o vendor/cigraph/vendor/cs/cs_util.o vendor/cigraph/vendor/cs/cs_utsolve.o vendor/cigraph/vendor/pcg/pcg-advance-128.o vendor/cigraph/vendor/pcg/pcg-advance-64.o vendor/cigraph/vendor/pcg/pcg-output-128.o vendor/cigraph/vendor/pcg/pcg-output-32.o vendor/cigraph/vendor/pcg/pcg-output-64.o vendor/cigraph/vendor/pcg/pcg-rngs-128.o vendor/cigraph/vendor/pcg/pcg-rngs-64.o vendor/cigraph/vendor/plfit/gss.o vendor/cigraph/vendor/plfit/hzeta.o vendor/cigraph/vendor/plfit/kolmogorov.o vendor/cigraph/vendor/plfit/lbfgs.o vendor/cigraph/vendor/plfit/mt.o vendor/cigraph/vendor/plfit/options.o vendor/cigraph/vendor/plfit/platform.o vendor/cigraph/vendor/plfit/plfit.o vendor/cigraph/vendor/plfit/plfit_error.o vendor/cigraph/vendor/plfit/rbinom.o vendor/cigraph/vendor/plfit/sampling.o vendor/io/dl-lexer.o vendor/io/dl-parser.o vendor/io/gml-lexer.o vendor/io/gml-parser.o vendor/io/lgl-lexer.o vendor/io/lgl-parser.o vendor/io/ncol-lexer.o vendor/io/ncol-parser.o vendor/io/pajek-lexer.o vendor/io/pajek-parser.o vendor/simpleraytracer/Color.o vendor/simpleraytracer/Light.o vendor/simpleraytracer/Point.o vendor/simpleraytracer/Ray.o vendor/simpleraytracer/RayTracer.o vendor/simpleraytracer/RayVector.o vendor/simpleraytracer/Shape.o vendor/simpleraytracer/Sphere.o vendor/simpleraytracer/Triangle.o vendor/simpleraytracer/unit_limiter.o vendor/uuid/R.o vendor/uuid/clear.o vendor/uuid/compare.o vendor/uuid/copy.o vendor/uuid/gen_uuid.o vendor/uuid/isnull.o vendor/uuid/pack.o vendor/uuid/parse.o vendor/uuid/unpack.o vendor/uuid/unparse.o vendor/cigraph/vendor/mini-gmp/mini-gmp.o -lxml2 -lglpk -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpiE7VTP/R.INSTALL187fbc67ef9537/igraph/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-igraph/00new/igraph/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (igraph) begin installing package ‘graphlayouts’ begin installing package ‘tidygraph’ * installing *source* package ‘Hmisc’ ... ** this is package ‘Hmisc’ version ‘5.2-2’ ** package ‘Hmisc’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEWI6B1/R.INSTALL18968629f3ae48/Hmisc/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c Hmisc.c -o Hmisc.o flang-new-19 -fpic -g -O2 -c cidxcn.f90 -o cidxcn.o flang-new-19 -fpic -g -O2 -c cidxcp.f90 -o cidxcp.o flang-new-19 -fpic -g -O2 -c cutgn.f90 -o cutgn.o flang-new-19 -fpic -g -O2 -c hlqest.f90 -o hlqest.o flang-new-19 -fpic -g -O2 -c hoeffd.f90 -o hoeffd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o flang-new-19 -fpic -g -O2 -c jacklins.f90 -o jacklins.o flang-new-19 -fpic -g -O2 -c largrec.f -o largrec.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c mChoice.c -o mChoice.o flang-new-19 -fpic -g -O2 -c maxempr.f90 -o maxempr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nstr.c -o nstr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c ranksort.c -o ranksort.o flang-new-19 -fpic -g -O2 -c rcorr.f90 -o rcorr.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c string_box.c -o string_box.o flang-new-19 -fpic -g -O2 -c wclosest.f90 -o wclosest.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o Hmisc.so Hmisc.o cidxcn.o cidxcp.o cutgn.o hlqest.o hoeffd.o init.o jacklins.o largrec.o mChoice.o maxempr.o nstr.o ranksort.o rcorr.o string_box.o wclosest.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEWI6B1/R.INSTALL18968629f3ae48/Hmisc/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-Hmisc/00new/Hmisc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Hmisc) * installing *source* package ‘tidygraph’ ... ** this is package ‘tidygraph’ version ‘1.3.1’ ** package ‘tidygraph’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCYcf4d/R.INSTALL189c1c510419e2/tidygraph/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c get_paths.cpp -o get_paths.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o tidygraph.so cpp11.o get_paths.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCYcf4d/R.INSTALL189c1c510419e2/tidygraph/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-tidygraph/00new/tidygraph/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tidygraph) * installing *source* package ‘AnnotationDbi’ ... ** this is package ‘AnnotationDbi’ version ‘1.68.0’ ** package ‘AnnotationDbi’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘packageName’ in package ‘AnnotationDbi’ Creating a generic function for ‘ls’ from package ‘base’ in package ‘AnnotationDbi’ Creating a generic function for ‘eapply’ from package ‘base’ in package ‘AnnotationDbi’ Creating a generic function for ‘exists’ from package ‘base’ in package ‘AnnotationDbi’ Creating a generic function for ‘sample’ from package ‘base’ in package ‘AnnotationDbi’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (AnnotationDbi) begin installing package ‘annotate’ * installing *source* package ‘DelayedArray’ ... ** this is package ‘DelayedArray’ version ‘0.32.0’ ** package ‘DelayedArray’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeZbYvJ/R.INSTALL189a945fe36f0e/DelayedArray/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c R_init_DelayedArray.c -o R_init_DelayedArray.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c S4Vectors_stubs.c -o S4Vectors_stubs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/S4Vectors/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c compress_atomic_vector.c -o compress_atomic_vector.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o DelayedArray.so R_init_DelayedArray.o S4Vectors_stubs.o compress_atomic_vector.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeZbYvJ/R.INSTALL189a945fe36f0e/DelayedArray/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-DelayedArray/00new/DelayedArray/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘apply’ in package ‘DelayedArray’ Creating a new generic function for ‘sweep’ in package ‘DelayedArray’ Creating a new generic function for ‘scale’ in package ‘DelayedArray’ Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qbinom’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qpois’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘DelayedArray’ Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘DelayedArray’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DelayedArray) begin installing package ‘SummarizedExperiment’ * installing *source* package ‘graphlayouts’ ... ** this is package ‘graphlayouts’ version ‘1.2.2’ ** package ‘graphlayouts’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpQXT3OS/R.INSTALL189c1a1a6f6698/graphlayouts/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c constrained_stress.cpp -o constrained_stress.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c constrained_stress3D.cpp -o constrained_stress3D.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c metroLayout.cpp -o metroLayout.o metroLayout.cpp:149:7: warning: variable 'k' set but not used [-Wunused-but-set-variable] 149 | int k = 0; | ^ 1 warning generated. clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c reweight.cpp -o reweight.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c sparseStress.cpp -o sparseStress.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stress.cpp -o stress.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -DARMA_64BIT_WORD=1 -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c stress3D.cpp -o stress3D.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o graphlayouts.so RcppExports.o constrained_stress.o constrained_stress3D.o metroLayout.o reweight.o sparseStress.o stress.o stress3D.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpQXT3OS/R.INSTALL189c1a1a6f6698/graphlayouts/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-graphlayouts/00new/graphlayouts/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graphlayouts) begin installing package ‘ggraph’ * installing *source* package ‘annotate’ ... ** this is package ‘annotate’ version ‘1.84.0’ ** package ‘annotate’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (annotate) begin installing package ‘genefilter’ * installing *source* package ‘ggraph’ ... ** this is package ‘ggraph’ version ‘2.2.1’ ** package ‘ggraph’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpxTazCA/R.INSTALL189e3448571f47/ggraph/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cactusTree.cpp -o cactusTree.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c circlePack.cpp -o circlePack.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c cpp11.cpp -o cpp11.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c dendrogram.cpp -o dendrogram.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c forceBundle.cpp -o forceBundle.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c hTree.cpp -o hTree.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c iciclePlot.cpp -o iciclePlot.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c lineCutter.cpp -o lineCutter.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c nodes.cpp -o nodes.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c pathAttr.cpp -o pathAttr.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c treemap.cpp -o treemap.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/cpp11/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c unrooted.cpp -o unrooted.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o ggraph.so cactusTree.o circlePack.o cpp11.o dendrogram.o forceBundle.o hTree.o iciclePlot.o lineCutter.o nodes.o pathAttr.o treemap.o unrooted.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpxTazCA/R.INSTALL189e3448571f47/ggraph/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-ggraph/00new/ggraph/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggraph) * installing *source* package ‘SummarizedExperiment’ ... ** this is package ‘SummarizedExperiment’ version ‘1.36.0’ ** package ‘SummarizedExperiment’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SummarizedExperiment) begin installing package ‘DESeq2’ * installing *source* package ‘genefilter’ ... ** this is package ‘genefilter’ version ‘1.88.0’ ** package ‘genefilter’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ using Fortran compiler: ‘Debian flang-new version 19.1.6 (1+b1)’ using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpeVho0O/R.INSTALL189e804172de13/genefilter/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c half_range_mode.cpp -o half_range_mode.o half_range_mode.cpp:100:88: warning: format specifies type 'int' but the argument has type 'size_type' (aka 'unsigned long') [-Wformat] 100 | if (diag) Rprintf( "N = %i, N'' = %i, w = %.4f, |J| = %i\n", N, N_double_prime, w, J.size() ); | ~~ ^~~~~~~~ | %zu 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c nd.c -o nd.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c pAUC.c -o pAUC.o pAUC.c:140:8: warning: use of bitwise '|' with boolean operands [-Wbitwise-instead-of-logical] 140 | if(rows != INTEGER(dimSens)[1] | columns != INTEGER(dimSens)[0]) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | || pAUC.c:140:8: note: cast one or both operands to int to silence this warning 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowPAUCs.c -o rowPAUCs.o clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c rowttests.c -o rowttests.o flang-new-19 -fpic -g -O2 -c ttest.f -o ttest.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o genefilter.so half_range_mode.o init.o nd.o pAUC.o rowPAUCs.o rowttests.o ttest.o -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpeVho0O/R.INSTALL189e804172de13/genefilter/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-genefilter/00new/genefilter/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (genefilter) begin installing package ‘sva’ * installing *source* package ‘sva’ ... ** this is package ‘sva’ version ‘3.54.0’ ** package ‘sva’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpVPERgI/R.INSTALL18a01d78555a45/sva/src' clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c sva.c -o sva.o sva.c:29:3: warning: suggest braces around initialization of subobject [-Wmissing-braces] 29 | NULL | ^~~~ | { } /usr/lib/llvm-19/lib/clang/19/include/__stddef_null.h:26:14: note: expanded from macro 'NULL' 26 | #define NULL ((void*)0) | ^~~~~~~~~~ 1 warning generated. clang-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o sva.so sva.o -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpVPERgI/R.INSTALL18a01d78555a45/sva/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-sva/00new/sva/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sva) * installing *source* package ‘DESeq2’ ... ** this is package ‘DESeq2’ version ‘1.46.0’ ** package ‘DESeq2’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘Debian clang version 19.1.6 (1+b1)’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDUVcPs/R.INSTALL189fe962be02c1/DESeq2/src' clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c DESeq2.cpp -o DESeq2.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-xtra/include" -DNDEBUG -I'/home/hornik/tmp/CRAN_special_clang-san/Library/Rcpp/include' -I'/home/hornik/tmp/CRAN_special_clang-san/Library/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -DR_NO_REMAP -c RcppExports.cpp -o RcppExports.o clang++-19 -fsanitize=address,undefined -fno-sanitize=float-divide-by-zero -fno-sanitize=alignment -fno-omit-frame-pointer -frtti -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-xtra/lib -Wl,-O1 -o DESeq2.so DESeq2.o RcppExports.o -llapack -L/home/hornik/tmp/R-d-clang-xtra/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/14 -L/usr/lib/x86_64-linux-gnu -L/usr/lib/llvm-19/lib -lFortranRuntime -lFortranDecimal -lm -L/home/hornik/tmp/R-d-clang-xtra/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDUVcPs/R.INSTALL189fe962be02c1/DESeq2/src' installing to /home/hornik/tmp/CRAN_special_clang-san/Library/00LOCK-DESeq2/00new/DESeq2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DESeq2) checking TransProR_1.0.1.tar.gz ... Depends: Package: TransProR Depends: R (>= 4.3.0) Imports: magrittr, stats, dplyr, rlang, tibble, sva, DESeq2, utils, edgeR, limma, ggplot2, ggVennDiagram, ggdensity, ggpubr, ggtree, hrbrthemes, grid, ggraph, tidygraph, tidyr, stringr, geomtextpath, ggalt, ggnewscale, ggtreeExtra, Hmisc, circlize, graphics, spiralize, ComplexHeatmap, grDevices Timings: user system elapsed TransProR 751.146 44.245 797.637 Results: Check status summary: OK Source packages 1 Check results summary: TransProR ... OK