downloading reverse dependencies ‘cholera’, ‘CRTspat’, ‘ForagingOrg’, ‘isocir’, ‘jocre’, ‘MLCOPULA’, ‘nlnet’, ‘PairViz’, ‘SCORPIUS’, ‘seriation’, ‘tspmeta’, ‘archetypes’, ‘condvis’, ‘ggEDA’, ‘nilde’, ‘sensitivity’, ‘sfnetworks’, ‘VineCopula’ trying URL 'file:///data/Repositories/CRAN/src/contrib/cholera_0.9.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/CRTspat_1.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ForagingOrg_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/isocir_2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/jocre_0.3.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/MLCOPULA_1.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nlnet_1.4.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PairViz_1.3.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/SCORPIUS_1.0.10.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/seriation_1.5.8.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/tspmeta_1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/archetypes_2.2-0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/condvis_0.5-1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ggEDA_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/nilde_1.1-7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/sensitivity_1.31.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/sfnetworks_0.6.5.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/VineCopula_2.6.1.tar.gz' installing dependencies ‘alr4’, ‘anndata’, ‘assertions’, ‘condMVNorm’, ‘DendSer’, ‘dynutils’, ‘dynwrap’, ‘GRIDCOPULA’, ‘HistData’, ‘IncDTW’, ‘INLA’, ‘kdecopula’, ‘lmds’, ‘OOR’, ‘PairViz’, ‘rank’, ‘scagnostics’, ‘Sleuth3’, ‘spatstat.random’, ‘tanaka’, ‘TSP’, ‘whitening’ Warning: package ‘INLA’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘mapiso’, ‘evmix’, ‘babelwhale’, ‘dynparam’ begin installing package ‘mapiso’ begin installing package ‘evmix’ begin installing package ‘HistData’ begin installing package ‘OOR’ begin installing package ‘Sleuth3’ begin installing package ‘alr4’ begin installing package ‘scagnostics’ begin installing package ‘dynutils’ begin installing package ‘anndata’ begin installing package ‘TSP’ begin installing package ‘assertions’ begin installing package ‘rank’ begin installing package ‘condMVNorm’ begin installing package ‘IncDTW’ begin installing package ‘whitening’ begin installing package ‘spatstat.random’ begin installing package ‘kdecopula’ * installing *source* package ‘rank’ ... ** this is package ‘rank’ version ‘0.2.0’ ** package ‘rank’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rank) * installing *source* package ‘condMVNorm’ ... ** this is package ‘condMVNorm’ version ‘2025.1’ ** package ‘condMVNorm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (condMVNorm) * installing *source* package ‘whitening’ ... ** this is package ‘whitening’ version ‘1.4.0’ ** package ‘whitening’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (whitening) * installing *source* package ‘HistData’ ... ** this is package ‘HistData’ version ‘1.0.0’ ** package ‘HistData’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HistData) * installing *source* package ‘OOR’ ... ** this is package ‘OOR’ version ‘0.1.4’ ** package ‘OOR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OOR) * installing *source* package ‘scagnostics’ ... ** this is package ‘scagnostics’ version ‘0.2-6’ ** package ‘scagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scagnostics) * installing *source* package ‘TSP’ ... ** this is package ‘TSP’ version ‘1.2.7’ ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-14) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmphZqXHB/R.INSTALL17f55b42ddbacb/TSP/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dll.c -o dll.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c insertion_cost.c -o insertion_cost.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tour_length.c -o tour_length.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c two_opt.c -o two_opt.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o TSP.so dll.o insertion_cost.o tour_length.o two_opt.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmphZqXHB/R.INSTALL17f55b42ddbacb/TSP/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-TSP/00new/TSP/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (TSP) begin installing package ‘DendSer’ begin installing package ‘PairViz’ * installing *source* package ‘Sleuth3’ ... ** this is package ‘Sleuth3’ version ‘1.0-6’ ** package ‘Sleuth3’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Sleuth3) * installing *source* package ‘mapiso’ ... ** this is package ‘mapiso’ version ‘0.3.0’ ** package ‘mapiso’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mapiso) begin installing package ‘tanaka’ * installing *source* package ‘assertions’ ... ** this is package ‘assertions’ version ‘0.3.0’ ** package ‘assertions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (assertions) * installing *source* package ‘DendSer’ ... ** this is package ‘DendSer’ version ‘1.0.3’ ** package ‘DendSer’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-14) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3mZTYE/R.INSTALL17f7e12e1d5251/DendSer/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DendSer_init.c -o DendSer_init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c carct.c -o carct.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cbar.c -o cbar.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c clpl.c -o clpl.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cpl.c -o cpl.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o DendSer.so DendSer_init.o carct.o cbar.o clpl.o cpl.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3mZTYE/R.INSTALL17f7e12e1d5251/DendSer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DendSer/00new/DendSer/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading Warning in seriation::set_criterion_method("dist", "BAR", criterion_method_dist_BAR, : Entry with name ‘BAR’ already exists! Modifying entry. ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DendSer) * installing *source* package ‘anndata’ ... ** this is package ‘anndata’ version ‘0.8.0’ ** package ‘anndata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (anndata) * installing *source* package ‘PairViz’ ... ** this is package ‘PairViz’ version ‘1.3.8’ ** package ‘PairViz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PairViz) * installing *source* package ‘alr4’ ... ** this is package ‘alr4’ version ‘1.0.7’ ** package ‘alr4’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (alr4) * installing *source* package ‘dynutils’ ... ** this is package ‘dynutils’ version ‘1.0.12’ ** package ‘dynutils’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-14) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp8tY3KV/R.INSTALL17f55069f87a8a/dynutils/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c project_to_segments.cpp -o project_to_segments.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spearman_rank_sparse.cpp -o spearman_rank_sparse.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o dynutils.so RcppExports.o project_to_segments.o spearman_rank_sparse.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp8tY3KV/R.INSTALL17f55069f87a8a/dynutils/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dynutils/00new/dynutils/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dynutils) begin installing package ‘babelwhale’ begin installing package ‘dynparam’ begin installing package ‘lmds’ * installing *source* package ‘tanaka’ ... ** this is package ‘tanaka’ version ‘0.4.0’ ** package ‘tanaka’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tanaka) * installing *source* package ‘evmix’ ... ** this is package ‘evmix’ version ‘2.12’ ** package ‘evmix’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (evmix) begin installing package ‘GRIDCOPULA’ * installing *source* package ‘lmds’ ... ** this is package ‘lmds’ version ‘0.1.0’ ** package ‘lmds’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lmds) * installing *source* package ‘babelwhale’ ... ** this is package ‘babelwhale’ version ‘1.2.0’ ** package ‘babelwhale’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (babelwhale) * installing *source* package ‘dynparam’ ... ** this is package ‘dynparam’ version ‘1.0.2’ ** package ‘dynparam’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dynparam) begin installing package ‘dynwrap’ * installing *source* package ‘spatstat.random’ ... ** this is package ‘spatstat.random’ version ‘3.4-5’ ** package ‘spatstat.random’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-14) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-14) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDhYdlJ/R.INSTALL17f5661c38e58e/spatstat.random/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c Perfect.cc -o Perfect.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c areaint.c -o areaint.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c badgey.c -o badgey.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dgs.c -o dgs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c diggra.c -o diggra.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c dist2.c -o dist2.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c fiksel.c -o fiksel.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c getcif.c -o getcif.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c geyer.c -o geyer.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hardcore.c -o hardcore.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lennard.c -o lennard.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lookup.c -o lookup.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c methas.c -o methas.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mhsnoop.c -o mhsnoop.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c multihard.c -o multihard.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c penttinen.c -o penttinen.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rcauchy.c -o rcauchy.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rmatclus.c -o rmatclus.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rthin.c -o rthin.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rthomas.c -o rthomas.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c rtruncpois.c -o rtruncpois.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sftcr.c -o sftcr.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c straush.c -o straush.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c straushm.c -o straushm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c strauss.c -o strauss.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c straussm.c -o straussm.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c triplets.c -o triplets.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o spatstat.random.so Perfect.o areaint.o badgey.o dgs.o diggra.o dist2.o fiksel.o getcif.o geyer.o hardcore.o init.o lennard.o lookup.o methas.o mhsnoop.o multihard.o penttinen.o rcauchy.o rmatclus.o rthin.o rthomas.o rtruncpois.o sftcr.o straush.o straushm.o strauss.o straussm.o triplets.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDhYdlJ/R.INSTALL17f5661c38e58e/spatstat.random/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spatstat.random/00new/spatstat.random/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spatstat.random) * installing *source* package ‘GRIDCOPULA’ ... ** this is package ‘GRIDCOPULA’ version ‘1.1.0’ ** package ‘GRIDCOPULA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GRIDCOPULA) * installing *source* package ‘dynwrap’ ... ** this is package ‘dynwrap’ version ‘1.2.5’ ** package ‘dynwrap’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dynwrap) * installing *source* package ‘kdecopula’ ... ** this is package ‘kdecopula’ version ‘0.9.3’ ** package ‘kdecopula’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-14) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEcFNCk/R.INSTALL17f5684cab1e28/kdecopula/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c evaluators.cpp -o evaluators.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c hfunc.cpp -o hfunc.o hfunc.cpp: In function ‘Rcpp::NumericVector inv_hfunc(const Rcpp::NumericMatrix&, const int&, const Rcpp::NumericMatrix&, const Rcpp::NumericVector&)’: hfunc.cpp:98:19: warning: ‘q’ may be used uninitialized [-Wmaybe-uninitialized] 98 | ql = ql - q; | ^ hfunc.cpp:69:12: note: ‘q’ was declared here 69 | double q; | ^ g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c integrate.cpp -o integrate.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interp.cpp -o interp.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c kernels.cpp -o kernels.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I../inst/include/ -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c renorm.cpp -o renorm.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o kdecopula.so RcppExports.o evaluators.o hfunc.o integrate.o interp.o kernels.o renorm.o -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEcFNCk/R.INSTALL17f5684cab1e28/kdecopula/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-kdecopula/00new/kdecopula/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (kdecopula) * installing *source* package ‘IncDTW’ ... ** this is package ‘IncDTW’ version ‘1.1.4.6’ ** package ‘IncDTW’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-14) 15.2.0’ using C++ compiler: ‘g++-15 (Debian 15.2.0-14) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwmXAxk/R.INSTALL17f560795e378/IncDTW/src' g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c GCM.cpp -o GCM.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dtw2vec.cpp -o dtw2vec.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dtw_dismat.cpp -o dtw_dismat.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c dtw_disvec.cpp -o dtw_disvec.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c help_functions.cpp -o help_functions.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-15 -std=gnu++20 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppParallel/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c rundtw.cpp -o rundtw.o g++-15 -std=gnu++20 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o IncDTW.so GCM.o RcppExports.o dtw2vec.o dtw_dismat.o dtw_disvec.o help_functions.o init.o rundtw.o -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwmXAxk/R.INSTALL17f560795e378/IncDTW/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-IncDTW/00new/IncDTW/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncDTW) checking TSP_1.2.7.tar.gz ... checking cholera_0.9.1.tar.gz ... checking CRTspat_1.4.0.tar.gz ... checking ForagingOrg_0.1.0.tar.gz ... checking isocir_2.1.tar.gz ... checking jocre_0.3.3.tar.gz ... checking MLCOPULA_1.1.0.tar.gz ... checking nlnet_1.4.tar.gz ... checking PairViz_1.3.8.tar.gz ... checking SCORPIUS_1.0.10.tar.gz ... checking seriation_1.5.8.tar.gz ... checking tspmeta_1.2.tar.gz ... checking archetypes_2.2-0.2.tar.gz ... checking condvis_0.5-1.tar.gz ... checking ggEDA_0.2.0.tar.gz ... checking nilde_1.1-7.tar.gz ... checking sensitivity_1.31.0.tar.gz ... checking sfnetworks_0.6.5.tar.gz ... checking VineCopula_2.6.1.tar.gz ... Depends: Package: TSP Depends: R (>= 3.5.0) Imports: graphics, foreach, utils, stats, grDevices Timings: user system elapsed TSP 35.052 4.799 42.856 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 17 Check results summary: TSP ... OK rdepends_archetypes ... OK rdepends_cholera ... OK rdepends_condvis ... NOTE * checking for unstated dependencies in ‘demo’ ... NOTE rdepends_CRTspat ... OK rdepends_ForagingOrg ... OK rdepends_ggEDA ... OK rdepends_isocir ... OK rdepends_jocre ... OK rdepends_MLCOPULA ... OK rdepends_nilde ... OK rdepends_nlnet ... OK rdepends_PairViz ... OK rdepends_SCORPIUS ... OK rdepends_sensitivity ... OK rdepends_seriation ... OK rdepends_sfnetworks ... OK rdepends_tspmeta ... OK rdepends_VineCopula ... OK Check results changes: Package: ForagingOrg Check: CRAN incoming feasibility Old result: NOTE Package: isocir Check: CRAN incoming feasibility Old result: NOTE Package: jocre Check: CRAN incoming feasibility Old result: NOTE Package: nilde Check: CRAN incoming feasibility Old result: NOTE Package: nlnet Check: CRAN incoming feasibility Old result: NOTE Package: tspmeta Check: CRAN incoming feasibility Old result: NOTE