* using log directory 'd:/RCompile/CRANincoming/R-devel/TECAT.Rcheck'
* using R version 4.5.0 RC (2025-04-03 r88103 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'TECAT/DESCRIPTION' ... OK
* this is package 'TECAT' version '0.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Jake Reed <hreed.ga@gmail.com>'

New submission

Non-FOSS package license (file LICENSE)

Possibly misspelled words in DESCRIPTION:
  TECAT (10:8, 16:54)
  Telomere (4:44, 9:25, 13:29)
  seqkit (16:13)
  telomere (8:2, 11:29, 12:15)
  telomeres (10:56)
  telomeric (13:10)

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Jake",
                      family = "Reed",
                      role = c("aut", "cre"),
                      email = "hreed.ga@gmail.com"),
               person(given = c("Kevin", "R."),
                      family = "Coombes",
                      role = "aut"),
               person(given = "Mark",
                      family = "Oelkuct",
                      role = "aut"))
as necessary.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'TECAT' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [17s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [541s] ERROR
Error(s) in re-building vignettes:
--- re-building 'ONT_example_vignette.Rmd' using rmarkdown

Quitting from ONT_example_vignette.Rmd:289-308 [telomere_length]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `parallel::mclapply()`:
! 'mc.cores' > 1 is not supported on Windows
---
Backtrace:
    ▆
 1. └─TECAT::determine_threshold(...)
 2.   └─parallel::mclapply(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'ONT_example_vignette.Rmd' failed with diagnostics:
'mc.cores' > 1 is not supported on Windows
--- failed re-building 'ONT_example_vignette.Rmd'

SUMMARY: processing the following file failed:
  'ONT_example_vignette.Rmd'

Error: Vignette re-building failed.
Execution halted

* checking PDF version of manual ... [13s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 1 NOTE