* using log directory 'd:/RCompile/CRANincoming/R-devel/TCPMOR.Rcheck' * using R Under development (unstable) (2024-03-05 r86054 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'TCPMOR/DESCRIPTION' ... OK * this is package 'TCPMOR' version '1.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Shuo Yang ' New submission * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'TCPMOR' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE calculateCutoffs: no visible binding for global variable 'se' calculateCutoffs: no visible binding for global variable 'sp' Undefined global functions or variables: se sp * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... [21m] NOTE Examples with CPU (user + system) or elapsed time > 10s user system elapsed calculateCutoffs 306.33 10.61 317.08 discretizeAge 304.99 10.81 315.96 findCutoffs 305.62 9.91 315.72 fitLogisticRegression 304.01 11.33 315.73 * checking for unstated dependencies in 'tests' ... OK * checking tests ... [318s] OK Running 'testthat.R' [318s] * checking PDF version of manual ... [20s] OK * checking HTML version of manual ... OK * DONE Status: 3 NOTEs