downloading reverse dependencies ... downloading Achilles_1.7.2.tar.gz ... ok downloading CohortAlgebra_0.3.0.tar.gz ... ok downloading CohortGenerator_0.11.1.tar.gz ... ok downloading CommonDataModel_0.2.0.tar.gz ... ok downloading DatabaseConnector_6.3.2.tar.gz ... ok downloading FeatureExtraction_3.7.1.tar.gz ... ok downloading ResultModelManager_0.5.11.tar.gz ... ok downloading allofus_1.1.0.tar.gz ... ok downloading CDMConnector_1.5.0.tar.gz ... ok downloading DrugExposureDiagnostics_1.0.9.tar.gz ... ok downloading TreatmentPatterns_2.6.9.tar.gz ... ok installing dependencies ‘Andromeda’, ‘Capr’, ‘CirceR’, ‘CohortGenerator’, ‘DatabaseConnector’, ‘DrugUtilisation’, ‘Eunomia’, ‘ParallelLogger’, ‘ResultModelManager’, ‘SqlRender’, ‘sunburstR’ Warning: package ‘Capr’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘CommonDataModel’, ‘CodelistGenerator’, ‘PatientProfiles’, ‘visOmopResults’, ‘d3r’ begin installing package ‘visOmopResults’ begin installing package ‘d3r’ begin installing package ‘ParallelLogger’ begin installing package ‘Andromeda’ begin installing package ‘CirceR’ begin installing package ‘SqlRender’ * installing *source* package ‘d3r’ ... ** package ‘d3r’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (d3r) * installing *source* package ‘ParallelLogger’ ... ** package ‘ParallelLogger’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ParallelLogger) begin installing package ‘sunburstR’ * installing *source* package ‘CirceR’ ... ** package ‘CirceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CirceR) * installing *source* package ‘SqlRender’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SqlRender) begin installing package ‘DatabaseConnector’ * installing *source* package ‘sunburstR’ ... ** package ‘sunburstR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sunburstR) * installing *source* package ‘visOmopResults’ ... ** package ‘visOmopResults’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (visOmopResults) begin installing package ‘PatientProfiles’ * installing *source* package ‘Andromeda’ ... ** package ‘Andromeda’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Andromeda) * installing *source* package ‘DatabaseConnector’ ... ** package ‘DatabaseConnector’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DatabaseConnector) begin installing package ‘CommonDataModel’ begin installing package ‘ResultModelManager’ * installing *source* package ‘PatientProfiles’ ... ** package ‘PatientProfiles’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PatientProfiles) begin installing package ‘CodelistGenerator’ * installing *source* package ‘CommonDataModel’ ... ** package ‘CommonDataModel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CommonDataModel) begin installing package ‘Eunomia’ * installing *source* package ‘CodelistGenerator’ ... ** package ‘CodelistGenerator’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CodelistGenerator) begin installing package ‘DrugUtilisation’ * installing *source* package ‘Eunomia’ ... ** package ‘Eunomia’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Eunomia) * installing *source* package ‘ResultModelManager’ ... ** package ‘ResultModelManager’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ResultModelManager) begin installing package ‘CohortGenerator’ * installing *source* package ‘DrugUtilisation’ ... ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) * installing *source* package ‘CohortGenerator’ ... ** package ‘CohortGenerator’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortGenerator) checking SqlRender_1.19.0.tar.gz ... checking Achilles_1.7.2.tar.gz ... checking CohortAlgebra_0.3.0.tar.gz ... checking CohortGenerator_0.11.1.tar.gz ... checking CommonDataModel_0.2.0.tar.gz ... checking DatabaseConnector_6.3.2.tar.gz ... checking FeatureExtraction_3.7.1.tar.gz ... checking ResultModelManager_0.5.11.tar.gz ... checking allofus_1.1.0.tar.gz ... checking CDMConnector_1.5.0.tar.gz ... checking DrugExposureDiagnostics_1.0.9.tar.gz ... checking TreatmentPatterns_2.6.9.tar.gz ... Depends: Package: SqlRender Imports: rJava, rlang, checkmate Timings: user system elapsed SqlRender 52.055 5.333 55.463 Results: Check status summary: ERROR NOTE OK Source packages 0 0 1 Reverse depends 1 1 9 Check results summary: SqlRender ... OK rdepends_Achilles ... OK rdepends_allofus ... OK rdepends_CDMConnector ... OK rdepends_CohortAlgebra ... OK rdepends_CohortGenerator ... OK rdepends_CommonDataModel ... ERROR * checking tests ... [19s/15s] ERROR rdepends_DatabaseConnector ... NOTE * checking Rd cross-references ... NOTE rdepends_DrugExposureDiagnostics ... OK rdepends_FeatureExtraction ... OK rdepends_ResultModelManager ... OK rdepends_TreatmentPatterns ... OK Check results changes: Package: CommonDataModel Check: tests New result: ERROR