R Under development (unstable) (2024-03-25 r86192 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(SomaDataIO) ═══════════════════════════════════════════════════════════════════════ Legal ══ SomaDataIO™ Copyright © 2024 SomaLogic Operating Co., Inc. The `SomaDataIO` package is licensed under the MIT license (`LICENSE.md`) and is intended solely for research use only ("RUO") purposes. The code contained herein may *not* be used for diagnostic, clinical, therapeutic, or other commercial purposes. Further, "SomaDataIO" and "SomaLogic" are trademarks owned by SomaLogic Operating Co., Inc. No license is hereby granted to these trademarks other than for purposes of identifying the origin or source of the Software. The above copyright notice and this permission notice shall be included in all copies or substantial portions of the Software. THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDER(S) BE LIABLE FOR ANY CLAIM, DAMAGES, WHETHER DIRECT OR INDIRECT, OR OTHER LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. ════════════════════════════════════════════════════════════════════════════════ Attaching package: 'SomaDataIO' The following object is masked from 'package:stats': filter > > test_check("SomaDataIO") [ FAIL 0 | WARN 0 | SKIP 23 | PASS 890 ] ══ Skipped tests (23) ══════════════════════════════════════════════════════════ • Add increased coverage unit tests for `pivotExpressionSet()`; issue #6 (1): 'test-pivotExpressionSet.R:12:3' • On CRAN (22): 'test-S3-median.R:5:3', 'test-S3-merge.R:9:3', 'test-S3-print.R:15:3', 'test-S3-summary.R:50:3', 'test-diffAdats.R:7:3', 'test-diffAdats.R:12:3', 'test-diffAdats.R:17:3', 'test-diffAdats.R:24:3', 'test-diffAdats.R:29:3', 'test-diffAdats.R:37:3', 'test-getAnalytes.R:23:3', 'test-getTargetNames.R:13:3', 'test-groupGenerics.R:154:3', 'test-is-intact-attr.R:46:3', 'test-loadAdatsAsList.R:23:3', 'test-loadAdatsAsList.R:28:3', 'test-loadAdatsAsList.R:62:3', 'test-parseHeader.R:29:3', 'test-read-adat.R:30:3', 'test-read-adat.R:40:3', 'test-scaleAnalytes.R:67:3', 'test-scaleAnalytes.R:73:3' [ FAIL 0 | WARN 0 | SKIP 23 | PASS 890 ] > > proc.time() user system elapsed 17.81 1.00 18.79