R Under development (unstable) (2025-06-09 r88292 ucrt) -- "Unsuffered Consequences"
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> # Workaround to fix unit tests in check as described here:
> # https://github.com/hadley/testthat/issues/86
> Sys.setenv(R_TESTS = "")
> 
> library(testthat)
> library(SelfControlledCaseSeries)
Loading required package: Cyclops
Loading required package: DatabaseConnector
Loading required package: Andromeda
Loading required package: dplyr

Attaching package: 'dplyr'

The following object is masked from 'package:testthat':

    matches

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

> test_check("SelfControlledCaseSeries")

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trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Content type 'application/zip' length 6861852 bytes (6.5 MB)
==================================================
downloaded 6.5 MB

Cohorts created in table main.cohort
Initiating cluster consisting only of main thread
Fetched 459 cases from server
Fetched 246 cases from server
Fetched 2561 cases from server
Fetched 0 cases from server
Initiating cluster consisting only of main thread
Initiating cluster consisting only of main thread

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Initiating cluster consisting only of main thread
Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using prior: None
Using 1 thread(s)

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK
Fitting SCCS model
Using prior: None

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (0.2)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (0.02)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (0.002)
Enforcing convergence!

Warning: problem is ill-conditioned for this choice of
	 prior (None) or
	 initial bounding box (0.0002)
Enforcing convergence!
Model fitting status is: ILLCONDITIONED
Fitting SCCS model
Fitting SCCS model
Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK
Fitting SCCS model
Model fitting status is: Could not estimate because there was no data
Fitting SCCS model
Fitting SCCS model

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Initiating cluster consisting only of main thread
Initiating cluster consisting only of main thread
Fetched 479 cases from server
Initiating cluster with 4 threads

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Stopping cluster

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK
trying URL 'https://raw.githubusercontent.com/OHDSI/EunomiaDatasets/main/datasets/GiBleed/GiBleed_5.3.zip'
Content type 'application/zip' length 6861852 bytes (6.5 MB)
==================================================
downloaded 6.5 MB

Fetched 4 cases from server

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Fetched 3 cases from server

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Fitting SCCS model
Using prior: Laplace(44.7214) None None None 
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)

Warning: BLR gradient is ill-conditioned
Enforcing convergence!
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)
Model fitting status is: OK

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Fitting SCCS model
Using prior: None
Using 1 thread(s)
Using 1 thread(s)
Using 1 thread(s)

Warning: BLR gradient is ill-conditioned
Enforcing convergence!
Model fitting status is: OK

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[ FAIL 0 | WARN 11 | SKIP 0 | PASS 290 ]

[ FAIL 0 | WARN 11 | SKIP 0 | PASS 290 ]
> 
> proc.time()
   user  system elapsed 
 260.25   36.50  279.78