R Under development (unstable) (2026-01-22 r89323 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(SVG)
SVG: Spatially Variable Genes Detection Methods
Version: 1.0.0
Author: Zaoqu Liu (liuzaoqu@163.com)
GitHub: https://github.com/Zaoqu-Liu/SVG
---
Available methods: MERINGUE, binSpect, SPARK-X, nnSVG
Use CalSVG() for unified interface or CalSVG_*() for specific methods
> 
> test_check("SVG")
Saving _problems/test-simulation-10.R
Saving _problems/test-simulation-28.R
Saving _problems/test-simulation-45.R
Saving _problems/test-simulation-56.R
Saving _problems/test-simulation-74.R
Saving _problems/test-simulation-88.R
Saving _problems/test-simulation-99.R
[ FAIL 7 | WARN 0 | SKIP 0 | PASS 65 ]

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-simulation.R:5:5'): simulate_spatial_data returns correct structure ──
Error in `simulate_spatial_data(n_spots = 100, n_genes = 50, n_svg = 10, seed = 42)`: unused argument (seed = 42)
── Error ('test-simulation.R:23:5'): simulate_spatial_data returns correct dimensions ──
Error in `simulate_spatial_data(n_spots = n_spots, n_genes = n_genes, n_svg = 10, seed = 42)`: unused argument (seed = 42)
── Error ('test-simulation.R:40:5'): simulate_spatial_data creates correct number of SVGs ──
Error in `simulate_spatial_data(n_spots = 100, n_genes = 50, n_svg = n_svg, seed = 42)`: unused argument (seed = 42)
── Error ('test-simulation.R:51:5'): simulate_spatial_data generates valid counts ──
Error in `simulate_spatial_data(n_spots = 100, n_genes = 50, n_svg = 10, seed = 42)`: unused argument (seed = 42)
── Error ('test-simulation.R:68:9'): different grid types work correctly ───────
Error in `simulate_spatial_data(n_spots = 50, n_genes = 20, n_svg = 5, grid_type = grid, seed = 42)`: unused argument (seed = 42)
── Error ('test-simulation.R:82:5'): different pattern types are assigned correctly ──
Error in `simulate_spatial_data(n_spots = 100, n_genes = 50, n_svg = 20, pattern_types = c("gradient", "hotspot", "periodic", "cluster"), seed = 42)`: unused argument (seed = 42)
── Error ('test-simulation.R:99:5'): reproducibility with same seed ────────────
Error in `simulate_spatial_data(n_spots = 50, n_genes = 20, n_svg = 5, seed = 123)`: unused argument (seed = 123)

[ FAIL 7 | WARN 0 | SKIP 0 | PASS 65 ]
Error:
! Test failures.
Execution halted