* using log directory 'd:/RCompile/CRANincoming/R-devel/SUMO.Rcheck'
* using R Under development (unstable) (2025-10-13 r88918 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'SUMO/DESCRIPTION' ... OK
* this is package 'SUMO' version '1.2.2'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [11s] OK
* checking package namespace information ... OK
* checking package dependencies ... INFO
Package suggested but not available for checking: 'MOFAdata'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'SUMO' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [19s] OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... ERROR
Running examples in 'SUMO-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: plot_simData
> ### Title: Visualize simulated multi-omics data as a heatmap
> ### Aliases: plot_simData
> 
> ### ** Examples
> 
> set.seed(1)
> sim_object <- list(
+   omics = list(
+     omic1 = matrix(rnorm(10 * 20), nrow = 10, ncol = 20),
+     omic2 = matrix(rnorm(10 * 15), nrow = 10, ncol = 15)
+   )
+ )
> output_obj = as_multiomics(sim_object)
Error in names(object) <- nm : 
  'names' attribute [1] must be the same length as the vector [0]
Calls: as_multiomics -> setNames
Execution halted
* checking for unstated dependencies in 'tests' ... OK
* checking tests ... OK
  Running 'testthat.R'
* checking PDF version of manual ... [20s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR