* using log directory ‘/srv/hornik/tmp/CRAN_pretest/SUMO.Rcheck’
* using R Under development (unstable) (2024-09-14 r87148)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 18.1.8 (9)
    Debian flang-new version 18.1.8 (9)
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘SUMO/DESCRIPTION’ ... OK
* this is package ‘SUMO’ version ‘0.0.0.9000’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/4s] NOTE
Maintainer: ‘Bernard Isekah Osang'ir <bernard.osangir@uhasselt.be>’

New submission

Version contains large components (0.0.0.9000)

Possibly misspelled words in DESCRIPTION:
  multiomics (7:208)
  multipled (7:260)
  omics (2:53, 7:82)

The Title field should be in title case. Current version is:
  ‘This package was developed to generate multi-omics datasets’
In title case that is:
  ‘This Package Was Developed to Generate Multi-Omics Datasets’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking serialization versions ... OK
* checking whether package ‘SUMO’ can be installed ... [3s/3s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [1s/1s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [1s/1s] OK
* checking loading without being on the library search path ... [1s/1s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [7s/7s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file 'OmixCraftHD.Rd':
  \examples lines wider than 100 characters:
     output_obj <- OmixCraftHD(vector_features = c(2000,3000), sigmas_vector=c(8,5), n_samples=100, n_factors=5, num.factor='multiple', adva ... [TRUNCATED]
     output_obj <- OmixCraftHD(vector_features = c(5000,3000), sigmas_vector=c(3,4), n_samples=30, n_factors=1)

Rd file 'plot_factor.Rd':
  \examples lines wider than 100 characters:
     output_obj <- OmixCraftHD(vector_features = c(2000,3000), sigmas_vector=c(3,4), n_samples=30, n_factors=1)

Rd file 'plot_simData.Rd':
  \examples lines wider than 100 characters:
     output_obj <- OmixCraftHD(vector_features = c(2000,3000), sigmas_vector=c(8,5), n_samples=100, n_factors=5, num.factor='multiple', adva ... [TRUNCATED]

Rd file 'plot_weights.Rd':
  \examples lines wider than 100 characters:
     output_obj <- OmixCraftHD(vector_features = c(2000,3000), sigmas_vector=c(8,5), n_samples=100, n_factors=4, num.factor='multiple', adva ... [TRUNCATED]

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [7s/8s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [2s/2s] OK
  Running ‘testthat.R’ [2s/2s]
* checking PDF version of manual ... [3s/2s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs