downloading reverse dependencies ... downloading easySdcTable_1.0.7.tar.gz ... ok downloading GaussSuppression_0.9.0.tar.gz ... ok downloading multiblock_0.8.8.2.tar.gz ... ok downloading RegSDC_0.7.0.tar.gz ... ok downloading sdcTable_0.32.6.tar.gz ... ok downloading SmallCountRounding_1.0.5.tar.gz ... ok installing dependencies ‘EMSC’, ‘glpkAPI’, ‘highs’, ‘mixlm’, ‘plsVarSel’, ‘r.jive’, ‘RegSDC’, ‘RGCCA’, ‘sdcHierarchies’, ‘sdcTable’, ‘SSBtools’ also installing the dependencies ‘praznik’, ‘shinyTree’ begin installing package ‘praznik’ begin installing package ‘shinyTree’ begin installing package ‘highs’ begin installing package ‘SSBtools’ begin installing package ‘mixlm’ begin installing package ‘EMSC’ begin installing package ‘r.jive’ begin installing package ‘RGCCA’ begin installing package ‘glpkAPI’ * installing *source* package ‘EMSC’ ... ** package ‘EMSC’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EMSC) * installing *source* package ‘r.jive’ ... ** package ‘r.jive’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (r.jive) * installing *source* package ‘shinyTree’ ... ** package ‘shinyTree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyTree) begin installing package ‘sdcHierarchies’ * installing *source* package ‘praznik’ ... ** package ‘praznik’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp9WkKBb/R.INSTALL348a1450b9751e/praznik/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fvisibility=hidden -fopenmp -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c praznik.c -o praznik.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o praznik.so praznik.o -fopenmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp9WkKBb/R.INSTALL348a1450b9751e/praznik/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-praznik/00new/praznik/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (praznik) begin installing package ‘plsVarSel’ * installing *source* package ‘glpkAPI’ ... ** package ‘glpkAPI’ successfully unpacked and MD5 sums checked ** using staged installation checking for gcc... gcc-14 checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc-14 accepts -g... yes checking for gcc-14 option to accept ISO C89... none needed checking how to run the C preprocessor... gcc-14 -E checking for prefix by checking for glpsol... no configure: No prefix given, trying /usr and /usr/local checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking glpk.h usability... yes checking glpk.h presence... yes checking for glpk.h... yes checking for library containing glp_create_prob... none required checking for glp_print_ranges... yes configure: creating ./config.status config.status: creating src/Makevars config.status: creating src/config.h ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpz25mPv/R.INSTALL348a18759b5c2d/glpkAPI/src' gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkAPI.c -o glpkAPI.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glpkCallback.c -o glpkCallback.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -DHAVE_CONFIG_H -I/usr/include -I/usr/local/include -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o glpkAPI.so glpkAPI.o glpkCallback.o init.o -L/usr/local/lib -L/usr/lib -L/usr/lib64 -lglpk -lgmp -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpz25mPv/R.INSTALL348a18759b5c2d/glpkAPI/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-glpkAPI/00new/glpkAPI/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glpkAPI) * installing *source* package ‘mixlm’ ... ** package ‘mixlm’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mixlm) * installing *source* package ‘plsVarSel’ ... ** package ‘plsVarSel’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plsVarSel) * installing *source* package ‘SSBtools’ ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SSBtools) begin installing package ‘RegSDC’ * installing *source* package ‘RGCCA’ ... ** package ‘RGCCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RGCCA) * installing *source* package ‘RegSDC’ ... ** package ‘RegSDC’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RegSDC) * installing *source* package ‘sdcHierarchies’ ... ** package ‘sdcHierarchies’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp3HQ5bd/R.INSTALL34903c37d3865a/sdcHierarchies/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c util-functions.cpp -o util-functions.o In file included from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/RcppCommon.h:189, from /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp.h:27, from util-functions.cpp:1: In function ‘SEXPREC* Rcpp::internal::primitive_wrap__impl__cast(const T&, Rcpp::traits::false_type) [with T = int]’, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap__impl(const T&, Rcpp::traits::r_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:465:46, inlined from ‘SEXPREC* Rcpp::internal::primitive_wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:489:40, inlined from ‘SEXPREC* Rcpp::internal::wrap_dispatch(const T&, Rcpp::traits::wrap_type_primitive_tag) [with T = int]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:744:34, inlined from ‘SEXPREC* Rcpp::wrap(const T&) [with T = int]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap_end.h:30:38, inlined from ‘static SEXPREC* Rcpp::internal::generic_element_converter::get(const T&) [with T = int; int RTYPE = 19]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/converter.h:80:23, inlined from ‘static void Rcpp::Vector::replace_element__dispatch__isArgument(Rcpp::traits::false_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:532:13, inlined from ‘static void Rcpp::Vector::replace_element__dispatch(Rcpp::traits::true_type, iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:525:46, inlined from ‘static void Rcpp::Vector::replace_element(iterator, SEXP, R_xlen_t, const U&) [with U = Rcpp::traits::named_object; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:514:34, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1168:32, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static void Rcpp::Vector::replace_element_impl(iterator&, Rcpp::Shield&, int&, const T&, const TArgs& ...) [with T = Rcpp::traits::named_object >; TArgs = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1169:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create__dispatch(Rcpp::traits::true_type, const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1148:37, inlined from ‘static Rcpp::Vector Rcpp::Vector::create(const T& ...) [with T = {Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object >, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object, Rcpp::traits::named_object >}; int RTYPE = 19; StoragePolicy = Rcpp::PreserveStorage]’ at /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/vector/Vector.h:1131:33, inlined from ‘Rcpp::List rcpp_leafinfo(Rcpp::DataFrame, Rcpp::CharacterVector)’ at util-functions.cpp:266:3: /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include/Rcpp/internal/wrap.h:442:41: warning: ‘level’ may be used uninitialized [-Wmaybe-uninitialized] 442 | r_vector_start(x)[0] = object; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~ util-functions.cpp: In function ‘Rcpp::List rcpp_leafinfo(Rcpp::DataFrame, Rcpp::CharacterVector)’: util-functions.cpp:199:7: note: ‘level’ was declared here 199 | int level; | ^~~~~ g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o sdcHierarchies.so RcppExports.o util-functions.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp3HQ5bd/R.INSTALL34903c37d3865a/sdcHierarchies/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sdcHierarchies/00new/sdcHierarchies/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sdcHierarchies) begin installing package ‘sdcTable’ * installing *source* package ‘sdcTable’ ... ** package ‘sdcTable’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-3) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-3) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpjaPcBr/R.INSTALL34932c1601f265/sdcTable/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp_helpers.cpp -o cpp_helpers.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c csp.cpp -o csp.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c normQuader2.cpp -o normQuader2.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sdcTable.c -o sdcTable.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c suppConstraints.cpp -o suppConstraints.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c suppMultDimTable.cpp -o suppMultDimTable.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o sdcTable.so RcppExports.o cpp_helpers.o csp.o init.o normQuader2.o sdcTable.o suppConstraints.o suppMultDimTable.o -lglpk -lgmp -lm -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpjaPcBr/R.INSTALL34932c1601f265/sdcTable/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sdcTable/00new/sdcTable/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sdcTable) * installing *source* package ‘highs’ ... ** package ‘highs’ successfully unpacked and MD5 sums checked ** using staged installation Use 'configure' CMAKE VERSION: 'cmake version 3.30.4' arch: 'x86_64' R_ARCH: '' CC: 'gcc-14' CXX: 'g++-14 -std=gnu++17' CXX11: 'g++-14' -- The CXX compiler identification is GNU 14.2.0 -- The C compiler identification is GNU 14.2.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++-14 - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc-14 - skipped -- Detecting C compile features -- Detecting C compile features - done -- IPO / LTO enabled -- Performing Test HIGHS_HAVE_MM_PAUSE -- Performing Test HIGHS_HAVE_MM_PAUSE - Success -- Performing Test HIGHS_HAVE_BUILTIN_CLZ -- Performing Test HIGHS_HAVE_BUILTIN_CLZ - Success -- Performing Test flag_supported -- Performing Test flag_supported - Success -- Performing Test flag_supported -- Performing Test flag_supported - Success -- Performing Test flag_supported -- Performing Test flag_supported - Success -- Performing Test flag_supported -- Performing Test flag_supported - Success -- Performing Test flag_supported -- Performing Test flag_supported - Success -- Performing Test flag_supported -- Performing Test flag_supported - Success -- Looking for a Fortran compiler -- Looking for a Fortran compiler - /usr/bin/gfortran-14 -- The Fortran compiler identification is GNU 14.2.0 -- Detecting Fortran compiler ABI info -- Detecting Fortran compiler ABI info - done -- Check for working Fortran compiler: /usr/bin/gfortran-14 - skipped -- Looking for a CSharp compiler -- Looking for a CSharp compiler - NOTFOUND -- Performing Test NO_OMIT_FRAME_POINTER_FLAG_SUPPORTED -- Performing Test NO_OMIT_FRAME_POINTER_FLAG_SUPPORTED - Success -- Compilation date: 2024-10-21 -- Build shared libraries: OFF -- Build type: RELEASE -- No CSharp support -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Configuring done (3.6s) -- Generating done (0.0s) -- Build files have been written to: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' make[2]: Entering directory 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src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_build_factors.c.o [ 64%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_factorize_bump.c.o [ 65%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_initialize.c.o [ 65%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_markowitz.c.o [ 66%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_setup_bump.c.o [ 67%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_solve_sparse.c.o [ 67%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/basiclu_get_factors.c.o [ 68%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/basiclu_solve_for_update.c.o [ 68%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_condest.c.o [ 69%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_file.c.o /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_file.c: In function ‘lu_file_reappend’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_file.c:80:24: warning: variable ‘room’ set but not used [-Wunused-but-set-variable] 80 | lu_int fmem, used, room, ibeg, iend, pos; | ^~~~ [ 70%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_internal.c.o [ 70%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_matrix_norm.c.o [ 71%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_singletons.c.o [ 72%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_solve_symbolic.c.o [ 72%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_update.c.o [ 73%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/basiclu_initialize.c.o [ 73%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/basiclu_solve_sparse.c.o [ 74%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_pivot.c.o /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_pivot.c: In function ‘lu_pivot_any’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_pivot.c:186:24: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 186 | lu_int grow, room, found, position; | ^~~~~ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_pivot.c: In function ‘lu_pivot_small’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_pivot.c:478:24: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 478 | lu_int grow, room, found, position, col_number; | ^~~~~ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_pivot.c: In function ‘lu_pivot_singleton_col’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/ipm/basiclu/lu_pivot.c:871:42: warning: variable ‘found’ set but not used [-Wunused-but-set-variable] 871 | lu_int j, pos, rpos, put, nz, where, found; | ^~~~~ [ 75%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_solve_dense.c.o [ 75%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_solve_triangular.c.o [ 76%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/basiclu_object.c.o [ 76%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/basiclu_update.c.o [ 77%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_dfs.c.o [ 78%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_garbage_perm.c.o [ 78%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_residual_test.c.o [ 79%] Building C object src/CMakeFiles/libhighs.dir/ipm/basiclu/lu_solve_for_update.c.o [ 79%] Building CXX object src/CMakeFiles/libhighs.dir/ipm/ipx/basiclu_kernel.cc.o [ 80%] Building CXX object src/CMakeFiles/libhighs.dir/ipm/ipx/basiclu_wrapper.cc.o [ 81%] Building CXX object 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object src/CMakeFiles/libhighs.dir/ipm/ipx/starting_basis.cc.o [ 97%] Building CXX object src/CMakeFiles/libhighs.dir/ipm/ipx/symbolic_invert.cc.o [ 97%] Building CXX object src/CMakeFiles/libhighs.dir/ipm/ipx/timer.cc.o [ 98%] Building CXX object src/CMakeFiles/libhighs.dir/ipm/ipx/utils.cc.o [ 99%] Linking CXX static library ../lib/libhighs.a make[3]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' [ 99%] Built target libhighs make[3]: Entering directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' make[3]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' make[3]: Entering directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' [ 99%] Building CXX object app/CMakeFiles/highs.dir/RunHighs.cpp.o [100%] Linking CXX executable ../bin/highs /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp: In function ‘assessBounds’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:359:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 359 | if (from_k > to_k) return HighsStatus::kOk; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:357:12: note: ‘to_k’ was declared here 357 | HighsInt to_k; | ^ In function ‘changeBounds’, inlined from ‘changeLpColBounds’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1608:15, inlined from ‘changeColBoundsInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:662:20: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1628:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 1628 | if (from_k > to_k) return; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp: In member function ‘changeColBoundsInterface’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1626:12: note: ‘to_k’ was declared here 1626 | HighsInt to_k; | ^ In member function ‘setNonbasicStatusInterface’, inlined from ‘setNonbasicStatusInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:833:6, inlined from ‘changeColBoundsInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:666:29: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:863:31: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 863 | for (HighsInt k = from_k; k <= to_k; k++) { | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp: In member function ‘changeColBoundsInterface’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:843:12: note: ‘to_k’ was declared here 843 | HighsInt to_k; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp: In function ‘assessCosts.constprop’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:288:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 288 | if (from_k > to_k) return return_status; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:286:12: note: ‘to_k’ was declared here 286 | HighsInt to_k; | ^ In function ‘changeLpCosts’, inlined from ‘changeCostsInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:621:16, inlined from ‘changeColsCost’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/Highs.cpp:2081:49, inlined from ‘feasibilityPump’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/mip/HighsPrimalHeuristics.cpp:1080:41: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1577:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 1577 | if (from_k > to_k) return; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp: In member function ‘feasibilityPump’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1575:12: note: ‘to_k’ was declared here 1575 | HighsInt to_k; | ^ In function ‘deleteScale’, inlined from ‘deleteRowsInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:365:16, inlined from ‘deleteRows’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/Highs.cpp:2449:22, inlined from ‘removeCuts’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/mip/HighsLpRelaxation.cpp:473:24: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1460:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 1460 | if (from_k > to_k) return; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp: In member function ‘removeCuts’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1458:12: note: ‘to_k’ was declared here 1458 | HighsInt to_k; | ^ In function ‘deleteRowsFromLpVectors’, inlined from ‘deleteLpRows’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1407:26, inlined from ‘deleteRowsInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:356:15, inlined from ‘deleteRows’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/Highs.cpp:2449:22, inlined from ‘removeCuts’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/mip/HighsLpRelaxation.cpp:473:24: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1420:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 1420 | if (from_k > to_k) return; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp: In member function ‘removeCuts’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1416:12: note: ‘to_k’ was declared here 1416 | HighsInt to_k; | ^ In member function ‘deleteRows’, inlined from ‘deleteLpRows’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsLpUtils.cpp:1408:26, inlined from ‘deleteRowsInterface’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/HighsInterface.cpp:356:15, inlined from ‘deleteRows’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/lp_data/Highs.cpp:2449:22, inlined from ‘removeCuts’ at /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/mip/HighsLpRelaxation.cpp:473:24: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/util/HighsSparseMatrix.cpp:605:3: warning: ‘to_k’ may be used uninitialized [-Wmaybe-uninitialized] 605 | if (from_k > to_k) return; | ^ /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/util/HighsSparseMatrix.cpp: In member function ‘removeCuts’: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/src/util/HighsSparseMatrix.cpp:603:12: note: ‘to_k’ was declared here 603 | HighsInt to_k; | ^ make[3]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' [100%] Built target highs make[2]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/inst/HiGHS/build' Install the project... -- Install configuration: "RELEASE" -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/bin/highs -- Set non-toolchain portion of runtime path of "/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/bin/highs" to "/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/lib" -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/filereaderlp/builder.hpp -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/filereaderlp/model.hpp -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/filereaderlp/reader.hpp -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/Filereader.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/FilereaderLp.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/FilereaderEms.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/FilereaderMps.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/HMpsFF.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/HMPSIO.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/HighsIO.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/io/LoadOptions.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HConst.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HStruct.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsAnalysis.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsDebug.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsInfo.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsInfoDebug.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsLp.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsLpSolverObject.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsLpUtils.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsModelUtils.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsOptions.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsRanging.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsRuntimeOptions.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsSolution.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsSolutionDebug.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsSolve.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/lp_data/HighsStatus.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsCliqueTable.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsCutGeneration.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsConflictPool.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsCutPool.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsDebugSol.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsDomainChange.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsDomain.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsDynamicRowMatrix.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsGFkSolve.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsImplications.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsLpAggregator.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsLpRelaxation.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsMipSolverData.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsMipSolver.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsModkSeparator.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsNodeQueue.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsObjectiveFunction.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsPathSeparator.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsPrimalHeuristics.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsPseudocost.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsRedcostFixing.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsSearch.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsSeparation.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsSeparator.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsTableauSeparator.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/mip/HighsTransformedLp.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/model/HighsHessian.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/model/HighsHessianUtils.h -- Installing: /home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs/model/HighsModel.h -- Installing: 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-I/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++11 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include -I/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/include/highs -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c highs_interface.cpp -o highs_interface.o highs_interface.cpp: In function ‘int32_t solver_get_sense(SEXP)’: highs_interface.cpp:259:17: warning: unused variable ‘status’ [-Wunused-variable] 259 | HighsStatus status = highs->getObjectiveSense(sense); | ^~~~~~ g++-14 -std=gnu++11 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o highs.so RcppExports.o highs_interface.o -L/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/lib -L/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src/highslib/lib64 -lhighs -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp0KSeks/R.INSTALL348a0e7f9fdf4d/highs/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-highs/00new/highs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (highs) checking SSBtools_1.5.5.tar.gz ... checking easySdcTable_1.0.7.tar.gz ... checking GaussSuppression_0.9.0.tar.gz ... checking multiblock_0.8.8.2.tar.gz ... checking RegSDC_0.7.0.tar.gz ... checking sdcTable_0.32.6.tar.gz ... checking SmallCountRounding_1.0.5.tar.gz ... Depends: Package: SSBtools Depends: Matrix Imports: stringr, methods, MASS Timings: user system elapsed SSBtools 86.327 5.846 90.869 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 2 4 Check results summary: SSBtools ... OK rdepends_easySdcTable ... NOTE * checking Rd cross-references ... NOTE rdepends_GaussSuppression ... OK rdepends_multiblock ... OK rdepends_RegSDC ... NOTE * checking Rd cross-references ... NOTE rdepends_sdcTable ... OK rdepends_SmallCountRounding ... OK