* installing *source* package ‘SPECIES’ ...
** using staged installation
** libs
using Fortran compiler: ‘GNU Fortran (Debian 13.2.0-2) 13.2.0’
gfortran  -fpic  -g -O2 -Wall -mtune=native -c  PPCG.f90 -o PPCG.o
PPCG.f90:437:38:

  437 |      theta_0=0.5*theta_0+0.5*thetaOld
      |                                      1  
Warning: Nonconforming tab character at (1) [-Wtabs]
PPCG.f90:91:27:

   91 |   INTEGER t,alphaK,cumuless,i,k,noZeroP
      |                           1
Warning: Unused variable ‘cumuless’ declared at (1) [-Wunused-variable]
PPCG.f90:534:62:

  534 |            IF (lambda1==0 .OR. lambda1<0 .OR. lambda1>100 .OR. sum_b .EQ. 0.D0) THEN
      |                                                              ^
Warning: ‘sum_b’ may be used uninitialized [-Wmaybe-uninitialized]
PPCG.f90:465:36:

  465 |   DOUBLE PRECISION n(50),sum_a,sum_b,Etol,z(t,noZeroP),d1,d2
      |                                    ^
note: ‘sum_b’ was declared here
PPCG.f90:177:9:

  177 |      IF (predict(k)<max_predict) THEN
      |         ^
Warning: ‘max_predict’ may be used uninitialized [-Wmaybe-uninitialized]
PPCG.f90:95:63:

   95 |   DOUBLE PRECISION test,Pmix,PmixScon,alpha(alphaK),max_predict, gamma2
      |                                                               ^
note: ‘max_predict’ was declared here
gfortran  -fpic  -g -O2 -Wall -mtune=native -c  WLunpmle.f90 -o WLunpmle.o
gfortran  -fpic  -g -O2 -Wall -mtune=native -c  norrispollock.f90 -o norrispollock.o
norrispollock.f90:108:86:

  108 |      like=like+lgamma(SUM(n1(2:(t+1)))+n00+1)-lgamma(n00+1)-lgamma(SUM(n1(2:(t+1)))+1)
      |                                                                                      ^
Warning: ‘n00’ may be used uninitialized [-Wmaybe-uninitialized]
norrispollock.f90:67:44:

   67 |   DOUBLE PRECISION  like,tempprob,lgamma,n00, untrunPmix
      |                                            ^
note: ‘n00’ was declared here
gfortran  -fpic  -g -O2 -Wall -mtune=native -c  pnpmle.f90 -o pnpmle.o
gfortran  -fpic  -g -O2 -Wall -mtune=native -c  shared.f90 -o shared.o
shared.f90:535:0:

  535 | DOUBLE PRECISION FUNCTION lgamma(X)
      | 
Warning: ‘lgamma’ declared at (1) is also the name of an intrinsic.  It can only be called via an explicit interface or if declared EXTERNAL. [-Wintrinsic-shadow]
shared.f90:209:62:

  209 |            IF (lambda1==0 .OR. lambda1<0 .OR. lambda1>100 .OR. sum_b .EQ. 0.D0) THEN
      |                                                              ^
Warning: ‘sum_b’ may be used uninitialized [-Wmaybe-uninitialized]
shared.f90:148:36:

  148 |   DOUBLE PRECISION n(50),sum_a,sum_b,Etol,z(t,noZeroP),d1,d2
      |                                    ^
note: ‘sum_b’ was declared here
clang-16 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o SPECIES.so PPCG.o WLunpmle.o norrispollock.o pnpmle.o shared.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR
installing to /srv/hornik/tmp/CRAN/SPECIES.Rcheck/00LOCK-SPECIES/00new/SPECIES/libs
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
Warning: S3 method ‘print.unpmleclass’ was declared in NAMESPACE but not found
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
Warning: S3 method ‘print.unpmleclass’ was declared in NAMESPACE but not found
** testing if installed package keeps a record of temporary installation path
* DONE (SPECIES)