# library(testthat) # library(SLEMI) # detach("package:SLEMI") # func_sampling_functions test_that("Check capacity algorithm - testing procedures",{ n_sample <- c(100) dist_sd <- 1 input_num <- 4 xx <- signif(c(0, exp( seq( from = log(0.01), to = log(100), length.out = input_num-1))), digits = 2) example_means <- 10*(xx/(1+xx)) example_sds <- rep(dist_sd, input_num) tempdata <- data.frame(signal = c(t(replicate(n_sample, xx))), output = c(matrix(rnorm(n = input_num*n_sample, mean = example_means,sd = example_sds), ncol = input_num,byrow = TRUE))) tempdata$signal <- factor(x = tempdata$signal,levels = sort(unique(tempdata$signal))) signal_name <- "signal" response_name <- "output" seed_to_use <- 12345 bootstrap_num <- 10 bootstrap_frac <- 0.8 overfitting_num <- 10 training_frac <- 0.6 cores_num=1 tempoutput <- SLEMI::capacity_logreg_main( dataRaw = tempdata, signal = signal_name, response = response_name, output_path = NULL, testing = TRUE, plot_width = 10 , plot_height = 8, TestingSeed = seed_to_use, testing_cores = cores_num, boot_num = bootstrap_num, boot_prob = bootstrap_frac, traintest_num = overfitting_num, partition_trainfrac = training_frac ) expect_equal(names(tempoutput), c("regression","model","p_opt","cc","testing","testing_pv","time","params" )) expect_true(tempoutput$cc>=0) expect_equal(round(sum(tempoutput$p_opt),digits=8),1) expect_true(all(sapply(tempoutput$testing$bootstrap,function(x) x$cc)>0)) expect_true(all(sapply(tempoutput$testing$traintest,function(x) x$cc)>0)) })