* using log directory 'd:/RCompile/CRANincoming/R-devel/SCAPE.Rcheck'
* using R Under development (unstable) (2025-01-08 r87545 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.3.0
    GNU Fortran (GCC) 13.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'SCAPE/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'SCAPE' version '0.1.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... ERROR
Maintainer: 'Zhou G. <zhougshi@mail2.sysu.edu.cn>'

New submission

Conflicting package names (submitted: SCAPE, existing: scape [https://CRAN.R-project.org])

Conflicting package names (submitted: SCAPE, existing: scape [CRAN archive])

Possibly misspelled words in DESCRIPTION:
  SCAPE (8:55, 9:5, 11:80)
  Zhoulab (12:38)
  bioinformatics (8:131)

No Authors@R field in DESCRIPTION.
Please add one, modifying
  Authors@R: c(person(given = "Guo",
                      family = "X.",
                      role = "aut"),
               person(given = "Huang",
                      family = "J.",
                      role = "aut"),
               person(given = "Wu",
                      family = "Z.",
                      role = "aut"),
               person(given = "Zhou",
                      family = "G.",
                      role = c("aut", "cre"),
                      email = "zhougshi@mail2.sysu.edu.cn"))
as necessary.

The Title field should be in title case. Current version is:
  'Single Cell Automatic Processing Engine, automatically remove doublets and annotate single cell clusters'
In title case that is:
  'Single Cell Automatic Processing Engine, Automatically Remove Doublets and Annotate Single Cell Clusters'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'SCAPE' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [28s] NOTE
run_scape_from_matrix: no visible binding for global variable '.'
run_scape_from_matrix: no visible binding for global variable
  'percent.mt'
run_scape_from_matrix: no visible binding for global variable
  'nFeature_RNA'
run_scape_from_matrix: no visible binding for global variable 'cluster'
run_scape_from_matrix: no visible binding for global variable
  'seurat_clusters'
Undefined global functions or variables:
  . cluster nFeature_RNA percent.mt seurat_clusters
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... NONE
* checking PDF version of manual ... [22s] OK
* checking HTML version of manual ... OK
* checking for code which exercises the package ... WARNING
No examples, no tests, no vignettes
* DONE
Status: 1 ERROR, 1 WARNING, 1 NOTE