############################################################################## # Subbolafit # checks against original implementation of subbotools # Depends on using the same sample to fit as the subbotools package # since R changes the rng in each version, to work this test must be manually # updated each time or use a constant sample skip() paste0("Subbolafit") # this routine does not output the std error for the parameters, neither does # it returns the covariance matrix test_that("SubLaplace:", { # subbolafit -V 1 < sublaplace.txt # bl br a m log-likelihood # 4.989886e-01 4.996535e-01 3.995011e+00 -2.153289e-05 3.385670e+00 orig_value <- generate_orig_dt( coef = c(4.989886e-01, 4.996535e-01, 3.995011e+00, -2.153289e-05), log_likelihood = 3.385670e+00, distribution = "subbolafit" ) check_fits(orig_value, .5, subbolafit) }) test_that("Laplace:", { # subbolafit -V 1 < laplace.txt # bl br a m log-likelihood # 1.000817e+00 1.002628e+00 1.999673e+00 3.943432e-04 2.385405e+00 orig_value <- generate_orig_dt( coef = c(1.000817e+00, 1.002628e+00, 1.999673e+00, 3.943432e-04), log_likelihood = 2.385405e+00, distribution = "subbolafit" ) check_fits(orig_value, 1, subbolafit) }) test_that("Subnormal:", { # subbolafit -V 1 < subnormal.txt # bl br a m log-likelihood # 1.502682e+00 1.505530e+00 7.637474e-01 -3.984272e-04 1.257220e+00 orig_value <- generate_orig_dt( coef = c(1.502682e+00, 1.505530e+00, 7.637474e-01, -3.984272e-04), log_likelihood = 1.257220e+00, distribution = "subbolafit" ) check_fits(orig_value, 1.5, subbolafit) }) test_that("Normal:", { # subbolafit -V 1 < normal.txt # bl br a m log-likelihood # 2.004459e+00 2.004388e+00 1.415614e+00 6.393844e-05 1.765696e+00 orig_value <- generate_orig_dt( coef = c(2.004393e+00, 2.004388e+00, 1.415614e+00, 6.393844e-05), log_likelihood = 1.765696e+00 ) check_fits(orig_value, 2, subbolafit) }) test_that("SuperNormal:", { # subbolafit -V 1 < supernormal.txt # bl br a m log-likelihood # 2.495521e+00 2.502094e+00 1.385714e+00 -2.454156e-04 1.666428e+00 orig_value <- generate_orig_dt( coef = c(2.495521e+00, 2.502094e+00, 1.385714e+00, -2.454156e-04), log_likelihood = 1.666428e+00, distribution = "subbolafit" ) check_fits(orig_value, 2.5, subbolafit) }) ##############################################################################