* installing *source* package ‘Rfast2’ ... ** using staged installation ** libs using C compiler: ‘Debian clang version 16.0.6 (3)’ using C++ compiler: ‘Debian clang version 16.0.6 (3)’ using C++17 clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c Eval.cpp -o Eval.o In file included from Eval.cpp:7: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c Random.cpp -o Random.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c add_term.cpp -o add_term.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c calc_qpois_regs.cpp -o calc_qpois_regs.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c censweib_reg.cpp -o censweib_reg.o In file included from censweib_reg.cpp:4: In file included from ./mn.h:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c col_row_utilities.cpp -o col_row_utilities.o In file included from col_row_utilities.cpp:2: In file included from ../inst/include/Rfast2.h:5: In file included from ../inst/include/Rfast2/matrix.hpp:14: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c colbeta_mle.cpp -o colbeta_mle.o In file included from colbeta_mle.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c colcauchy_mle.cpp -o colcauchy_mle.o In file included from colcauchy_mle.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c colspml_mle.cpp -o colspml_mle.o In file included from colspml_mle.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c cts.cpp -o cts.o In file included from cts.cpp:4: In file included from ./cts.h:10: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fbed_reg.cpp -o fbed_reg.o In file included from fbed_reg.cpp:7: In file included from ./mn.h:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c fedhc_skeleton.cpp -o fedhc_skeleton.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c gamma_reg.cpp -o gamma_reg.o In file included from gamma_reg.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c gamma_regs.cpp -o gamma_regs.o In file included from gamma_regs.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang-16 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O3 -Wall -pedantic -c init.c -o init.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c is_symmetric.cpp -o is_symmetric.o In file included from is_symmetric.cpp:5: In file included from ./mn.h:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c mmhc_skeleton.cpp -o mmhc_skeleton.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c mmp_c.cpp -o mmp_c.o In file included from mmp_c.cpp:9: In file included from ./mmp_c.h:12: In file included from ./cts.h:10: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c mmpc2.cpp -o mmpc2.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c mn.cpp -o mn.o In file included from mn.cpp:7: In file included from ./mn.h:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c multinom_reg.cpp -o multinom_reg.o In file included from multinom_reg.cpp:4: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c negbin_reg.cpp -o negbin_reg.o In file included from negbin_reg.cpp:7: In file included from ./mn.h:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c negbin_regs.cpp -o negbin_regs.o In file included from negbin_regs.cpp:7: In file included from ./mn.h:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c reg_lib2.cpp -o reg_lib2.o In file included from reg_lib2.cpp:6: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c reg_lib_helper.cpp -o reg_lib_helper.o In file included from reg_lib_helper.cpp:6: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c sf.cpp -o sf.o In file included from sf.cpp:5: In file included from ./mmp_c.h:12: In file included from ./cts.h:10: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c skel_helper.cpp -o skel_helper.o clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c utilities.cpp -o utilities.o In file included from utilities.cpp:9: In file included from ../inst/include/Rfast2.h:5: In file included from ../inst/include/Rfast2/matrix.hpp:14: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c weib_regs.cpp -o weib_regs.o In file included from weib_regs.cpp:7: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c welch_tests.cpp -o welch_tests.o In file included from welch_tests.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I../inst/include -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.4/x86_64-linux-gnu/RcppParallel/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fopenmp -fpic -g -O3 -Wall -pedantic -c wild_boot.cpp -o wild_boot.o In file included from wild_boot.cpp:5: In file included from ../inst/include/Rfast2/templates.h:10: ../inst/include/Rfast2/parallel.h:15:9: warning: 201703L [-W#pragma-messages] #pragma message STR(__cplusplus) ^ ../inst/include/Rfast2/parallel.h:19:9: warning: Parallel is supported [-W#pragma-messages] #pragma message "Parallel is supported" ^ 2 warnings generated. clang++-16 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o Rfast2.so Eval.o Random.o add_term.o calc_qpois_regs.o censweib_reg.o col_row_utilities.o colbeta_mle.o colcauchy_mle.o colspml_mle.o cts.o fbed_reg.o fedhc_skeleton.o gamma_reg.o gamma_regs.o init.o is_symmetric.o mmhc_skeleton.o mmp_c.o mmpc2.o mn.o multinom_reg.o negbin_reg.o negbin_regs.o reg_lib2.o reg_lib_helper.o sf.o skel_helper.o utilities.o weib_regs.o welch_tests.o wild_boot.o -llapack -L/home/hornik/tmp/R/lib -lRblas -L/usr/lib/gcc/x86_64-linux-gnu/12 -lgfortran -lm -lquadmath -fopenmp -L/home/hornik/tmp/R/lib -lR installing to /srv/hornik/tmp/CRAN/Rfast2.Rcheck/00LOCK-Rfast2/00new/Rfast2/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rfast2)