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Type 'q()' to quit R. > library(testthat) > library(ResultModelManager) Loading required package: R6 Loading required package: DatabaseConnector > > test_check("ResultModelManager") Connecting using SQLite driver trying URL 'https://ohdsi.github.io/DatabaseConnectorJars/postgresqlV42.2.18.zip' Content type 'application/zip' length 931791 bytes (909 KB) ================================================== downloaded 909 KB DatabaseConnector postgresql JDBC driver downloaded to 'C:\Users\CRAN\Documents/.jdbcDrivers'. Connecting using SQLite driver | | | 0% | |=================================== | 50% | |======================================================================| 100% Executing SQL took 0.0114 secs Connecting using SQLite driver [1] "SELECT 1 * WHERE;" attr(,"sqlDialect") [1] "sqlite" Closing database connection Connecting using SQLite driver Closing database connection Connecting using SQLite driver Closing database connection | | | 0% | |======================================================================| 100% Executing SQL took 0.00532 secs Connecting using SQLite driver | | | 0% | |=================================== | 50% | |======================================================================| 100% Executing SQL took 0.00536 secs Using DatabaseConnector jdbc driver. Initalizing pooled connection Connecting using SQLite driver [1] "SELECT 1 * WHERE;" attr(,"sqlDialect") [1] "sqlite" Initalizing pooled connection Connecting using SQLite driver Initalizing pooled connection Connecting using SQLite driver | | | 0% | |======================================================================| 100% Executing SQL took 0.00444 secs Migrator using SQL files in ResultModelManager Connecting using SQLite driver Creating migrations table Executing SQL took 0.00445 secs Migrations table created Executing migration: Migration_1-example.sql Executing SQL took 0.004 secs Saving migration: Migration_1-example.sql Executing SQL took 0.00608 secs Migration complete Migration_1-example.sql Executing migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.0056 secs Saving migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00358 secs Migration complete Migration_2-MultiPlatformExample.sql Closing database connection Connecting using SQLite driver Migrator using SQL files in ResultModelManager Connecting using SQLite driver Closing database connection Migrator using SQL files in directory structure Connecting using SQLite driver Creating migrations table Executing SQL took 0.00386 secs Migrations table created Executing migration: Migration_1-example.sql Executing SQL took 0.00568 secs Saving migration: Migration_1-example.sql Executing SQL took 0.00371 secs Migration complete Migration_1-example.sql Executing migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00542 secs Saving migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00373 secs Migration complete Migration_2-MultiPlatformExample.sql Closing database connection Connecting using SQLite driver Migrator using SQL files in directory structure Column databaseId in table foo in results folder foo.zip is of type character, but was expecting bigint. Attempting to convert. Column charField in table foo in results folder foo.zip is of type numeric, but was expecting varchar. Attempting to convert. Column dateField in table foo in results folder foo.zip is of type character, but was expecting date. Attempting to convert. Using DatabaseConnector jdbc driver. Connecting using SQLite driver Connecting using SQLite driver Executing SQL took 0.00388 secs Closing database connection Error in .subset2(e, "finalize")() : attempt to apply non-function Calls: -> Connecting using SQLite driver Executing SQL took 0.00354 secs Connecting using SQLite driver Using DatabaseConnector jdbc driver. Initalizing pooled connection Connecting using SQLite driver Closing database connection null/na primary keys found duplicate primary keys found Connecting using SQLite driver Inserting data took 0.0556 secs Connecting using SQLite driver Closing database connection | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Executing SQL took 0.00975 secs Connecting using SQLite driver [ FAIL 0 | WARN 0 | SKIP 9 | PASS 118 ] ══ Skipped tests (9) ═══════════════════════════════════════════════════════════ • On CRAN (2): 'test-DataMigrationManager.R:70:3', 'test-DataMigrationManager.R:92:3' • results db not available (7): 'test-DataModel.R:18:3', 'test-DataModel.R:56:3', 'test-DataModel.R:142:3', 'test-DataModel.R:197:3', 'test-DataModel.R:237:3', 'test-ResultExportManager.R:130:3', 'test-Utils.R:15:3' [ FAIL 0 | WARN 0 | SKIP 9 | PASS 118 ] > > proc.time() user system elapsed 8.23 2.98 8.70