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Type 'q()' to quit R. > library(testthat) > library(ResultModelManager) Loading required package: R6 Loading required package: DatabaseConnector > > test_check("ResultModelManager") Connecting using SQLite driver trying URL 'https://ohdsi.github.io/DatabaseConnectorJars/postgresqlV42.2.18.zip' Content type 'application/zip' length 931791 bytes (909 KB) ================================================== downloaded 909 KB DatabaseConnector postgresql JDBC driver downloaded to 'C:\Users\CRAN\Documents/.jdbcDrivers'. Connecting using SQLite driver | | | 0% | |=================================== | 50% | |======================================================================| 100% Executing SQL took 0.0144 secs Connecting using SQLite driver [1] "SELECT 1 * WHERE;" attr(,"sqlDialect") [1] "sqlite" Closing database connection Connecting using SQLite driver Closing database connection Connecting using SQLite driver Closing database connection | | | 0% | |======================================================================| 100% Executing SQL took 0.0048 secs Connecting using SQLite driver | | | 0% | |=================================== | 50% | |======================================================================| 100% Executing SQL took 0.00503 secs Using DatabaseConnector jdbc driver. Initalizing pooled connection Connecting using SQLite driver [1] "SELECT 1 * WHERE;" attr(,"sqlDialect") [1] "sqlite" Initalizing pooled connection Connecting using SQLite driver Initalizing pooled connection Connecting using SQLite driver | | | 0% | |======================================================================| 100% Executing SQL took 0.00658 secs Migrator using SQL files in ResultModelManager Connecting using SQLite driver Creating migrations table Executing SQL took 0.00431 secs Migrations table created Executing migration: Migration_1-example.sql Executing SQL took 0.00409 secs Saving migration: Migration_1-example.sql Executing SQL took 0.00512 secs Migration complete Migration_1-example.sql Executing migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00837 secs Saving migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00589 secs Migration complete Migration_2-MultiPlatformExample.sql Closing database connection Connecting using SQLite driver Migrator using SQL files in ResultModelManager Connecting using SQLite driver Closing database connection Migrator using SQL files in directory structure Connecting using SQLite driver Creating migrations table Executing SQL took 0.00623 secs Migrations table created Executing migration: Migration_1-example.sql Executing SQL took 0.00893 secs Saving migration: Migration_1-example.sql Executing SQL took 0.00379 secs Migration complete Migration_1-example.sql Executing migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00662 secs Saving migration: Migration_2-MultiPlatformExample.sql Executing SQL took 0.00364 secs Migration complete Migration_2-MultiPlatformExample.sql Closing database connection Connecting using SQLite driver Migrator using SQL files in directory structure Connecting using SQLite driver Executing migration: Migration_3-test-add.sql Executing SQL took 0.00515 secs Saving migration: Migration_3-test-add.sql Executing SQL took 0.00723 secs Migration complete Migration_3-test-add.sql Closing database connection Migrator using SQL files in directory structure File name not valid foo.sql Migrator using SQL files in directory structure Column databaseId in table foo in results folder foo.zip is of type character, but was expecting bigint. Attempting to convert. Column charField in table foo in results folder foo.zip is of type numeric, but was expecting varchar. Attempting to convert. Column dateField in table foo in results folder foo.zip is of type character, but was expecting date. Attempting to convert. Using DatabaseConnector jdbc driver. Connecting using SQLite driver Connecting using SQLite driver Executing SQL took 0.00372 secs Closing database connection Error in .subset2(e, "finalize")() : attempt to apply non-function Calls: -> Connecting using SQLite driver Executing SQL took 0.00315 secs Connecting using SQLite driver Using DatabaseConnector jdbc driver. Initalizing pooled connection Connecting using SQLite driver Closing database connection null/na primary keys found duplicate primary keys found Connecting using SQLite driver Inserting data took 0.0548 secs Connecting using SQLite driver Closing database connection | | | 0% | |============ | 17% | |======================= | 33% | |=================================== | 50% | |=============================================== | 67% | |========================================================== | 83% | |======================================================================| 100% Executing SQL took 0.0094 secs Connecting using SQLite driver [ FAIL 0 | WARN 0 | SKIP 7 | PASS 122 ] ══ Skipped tests (7) ═══════════════════════════════════════════════════════════ • results db not available (7): 'test-DataModel.R:18:3', 'test-DataModel.R:56:3', 'test-DataModel.R:142:3', 'test-DataModel.R:197:3', 'test-DataModel.R:237:3', 'test-ResultExportManager.R:130:3', 'test-Utils.R:15:3' [ FAIL 0 | WARN 0 | SKIP 7 | PASS 122 ] > > proc.time() user system elapsed 8.68 2.95 8.53