* using log directory 'd:/RCompile/CRANincoming/R-devel/ResultModelManager.Rcheck' * using R Under development (unstable) (2023-12-18 r85702 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'ResultModelManager/DESCRIPTION' ... OK * this is package 'ResultModelManager' version '0.5.6' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Jamie Gilbert ' New submission Possibly misspelled words in DESCRIPTION: OHDSI (2:39, 6:59) RMM (2:30) Found the following (possibly) invalid URLs: URL: https://codecov.io/github/OHDSI/ResultModelManager?branch=main (moved to https://app.codecov.io/github/OHDSI/ResultModelManager?branch=main) From: README.md Status: 301 Message: Moved Permanently URL: https://ohdsi.github.io/Hades (moved to https://ohdsi.github.io/Hades/) From: README.md Status: 301 Message: Moved Permanently For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. The Title field should be in title case. Current version is: 'Result Model Manager (RMM) for OHDSI packages' In title case that is: 'Result Model Manager (RMM) for OHDSI Packages' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'ResultModelManager' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard file/directory found at top level: 'sql' * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE uploadChunk: no visible binding for global variable 'tableName' Undefined global functions or variables: tableName * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'testthat.R' * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... WARNING Failed to locate 'weave' output file 'UsingAnExportManager.pdf' or 'UsingAnExportManager.html' for vignette with name 'UsingAnExportManager' and engine 'knitr::rmarkdown'. The following files exist in working directory 'D:\RCompile\CRANincoming\R-devel\ResultModelManager.Rcheck\00_pkg_src\ResultModelManager\inst\doc': 'CreatingMigrations.R' (1264 bytes), 'CreatingMigrations.Rmd' (6670 bytes), 'CreatingMigrations.pdf' (245251 bytes), 'PackageDesign.R' (1647 bytes), 'PackageDesign.Rmd' (10645 bytes), 'PackageDesign.pdf' (225551 bytes), 'UploadFunctionality.R' (1407 bytes), 'UploadFunctionality.Rmd' (4379 bytes), 'UploadFunctionality.pdf' (202324 bytes), 'UsingAnExportManager.R' (3405 bytes), 'UsingAnExportManager.Rmd' (5436 bytes), 'UsingAnexportManager.pdf' (213782 bytes), 'UsingConnectionHandlers.R' (826 bytes), 'UsingConnectionHandlers.Rmd' (2197 bytes), 'UsingConnectionHandlers.pdf' (180530 bytes), 'UsingQueryNamespaces.R' (2030 bytes), 'UsingQueryNamespaces.Rmd' (3341 bytes), 'UsingQueryNamespaces.pdf' (204468 bytes) Package vignette without corresponding single PDF/HTML: 'UsingAnExportManager.Rmd' * checking re-building of vignette outputs ... [43s] OK * checking PDF version of manual ... [14s] OK * checking HTML version of manual ... OK * DONE Status: 1 WARNING, 3 NOTEs