downloading reverse dependencies ... downloading SpaDES.core_2.1.0.tar.gz ... ok installing dependencies ‘archive’, ‘fpCompare’, ‘NLMR’, ‘quickPlot’, ‘reproducible’, ‘Require’, ‘rmarkdown’, ‘SpaDES.tools’ Warning: package ‘NLMR’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages begin installing package ‘fpCompare’ begin installing package ‘Require’ begin installing package ‘rmarkdown’ begin installing package ‘archive’ * installing *source* package ‘fpCompare’ ... ** package ‘fpCompare’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fpCompare) begin installing package ‘quickPlot’ begin installing package ‘reproducible’ * installing *source* package ‘rmarkdown’ ... ** package ‘rmarkdown’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmarkdown) * installing *source* package ‘quickPlot’ ... ** package ‘quickPlot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quickPlot) * installing *source* package ‘Require’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in file(con, "r") : cannot open file '/home/hornik/tmp/CRAN/Library/Require/DESCRIPTION': No such file or directory Error in file(con, "r") : cannot open the connection ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Require) * installing *source* package ‘reproducible’ ... ** package ‘reproducible’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reproducible) begin installing package ‘SpaDES.tools’ * installing *source* package ‘archive’ ... ** package ‘archive’ successfully unpacked and MD5 sums checked ** using staged installation ** Running ./configure Found pkg-config cflags and libs! PKG_CONFIG_PATH= PKG_CFLAGS= PKG_LIBS=-larchive ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-1) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpdoTIq4/R.INSTALL202fe75ffb886e/archive/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive.cpp -o archive.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_extract.cpp -o archive_extract.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_read.cpp -o archive_read.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_write.cpp -o archive_write.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_write_direct.cpp -o archive_write_direct.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c archive_write_files.cpp -o archive_write_files.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c cpp11.cpp -o cpp11.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c r_archive.cpp -o r_archive.o gcc-14 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -Icpp11/include -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/cli/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c connection/connection.c -o connection/connection.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o archive.so archive.o archive_extract.o archive_read.o archive_write.o archive_write_direct.o archive_write_files.o cpp11.o r_archive.o -larchive -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpdoTIq4/R.INSTALL202fe75ffb886e/archive/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-archive/00new/archive/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (archive) * installing *source* package ‘SpaDES.tools’ ... ** package ‘SpaDES.tools’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-1) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmp7L41NX/R.INSTALL2032015f01b618/SpaDES.tools/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c duplicated.cpp -o duplicated.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R-d-gcc-14/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c runif.cpp -o runif.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-gcc-14/lib -Wl,-O1 -o SpaDES.tools.so RcppExports.o duplicated.o runif.o -L/home/hornik/tmp/R-d-gcc-14/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmp7L41NX/R.INSTALL2032015f01b618/SpaDES.tools/src' installing to /home/hornik/tmp/CRAN/Library/00LOCK-SpaDES.tools/00new/SpaDES.tools/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SpaDES.tools) checking Require_1.0.1.tar.gz ... checking SpaDES.core_2.1.0.tar.gz ... Depends: Package: Require Depends: R (>= 4.0) Imports: data.table (>= 1.10.4), methods, sys, tools, utils Timings: user system elapsed Require 58.295 7.03 68.602 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 0 Check results summary: Require ... OK rdepends_SpaDES.core ... NOTE * checking package dependencies ... NOTE * checking Rd cross-references ... NOTE