Package: DatabionicSwarm Check: examples New result: ERROR Running examples in ‘DatabionicSwarm-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: DBSclustering > ### Title: Databonic swarm clustering (DBS) > ### Aliases: DBSclustering > ### Keywords: DBS swarm clustering cluster analysis cluster > > ### ** Examples > > data("Lsun3D") > Data=Lsun3D$Data > InputDistances=as.matrix(dist(Data)) > ## Example One > > ## Example Two > ## Not run: > ##D ## Example Three > ##D ## Sometimes an automatic Clustering can be improved > ##D ## through an interactive approach, > ##D ## e.g. if Outliers exist (see [Thrun/Ultsch, 2017]) > ##D library(ProjectionBasedClustering) > ##D Cls2=ProjectionBasedClustering::interactiveClustering(genUmatrixList$Umatrix, > ##D genUmatrixList$Bestmatches, Cls) > ## End(Not run) > ## Don't show: > data2=matrix(runif(n = 50),10,5) > distance=as.matrix(dist(data2)) > res2=Pswarm(distance, LC = c(10,12)) Warning in Pswarm(distance, LC = c(10, 12)) : Data matrix is square. Assuming a distance matrix! [1] "Initialization phase successful (Time: 0 secs)." [1] "Starting swarm game ..." [1] "Swarm computation ended (Time: 0.02 secs)." [1] "Adjusting ..." > Cls=DBSclustering(k=2, data2, res2$ProjectedPoints, res2$LC, + PlotIt=FALSE) Loading required namespace: parallelDist Failed with error: ‘unable to load shared object '/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so': /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so: undefined symbol: _ZTIN3tbb4taskE’ Warning in DBSclustering(k = 2, data2, res2$ProjectedPoints, res2$LC, PlotIt = FALSE) : DBSclustering: package parallelDist is not installed, falling back to dist(). Error in dyn.load(file, DLLpath = DLLpath, ...) : unable to load shared object '/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so': /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so: undefined symbol: _ZTIN3tbb4taskE Calls: DBSclustering ... as.matrix -> loadNamespace -> library.dynam -> dyn.load Execution halted Package: DatabionicSwarm Check: re-building of vignette outputs New result: ERROR Error(s) in re-building vignettes: ... --- re-building ‘DatabionicSwarm.Rmd’ using rmarkdown Failed with error: 'unable to load shared object '/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so': /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so: undefined symbol: _ZTIN3tbb4taskE' Quitting from lines 96-105 [unnamed-chunk-5] (DatabionicSwarm.Rmd) Error: processing vignette 'DatabionicSwarm.Rmd' failed with diagnostics: unable to load shared object '/home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so': /home/hornik/lib/R/Library/4.5/x86_64-linux-gnu/parallelDist/libs/parallelDist.so: undefined symbol: _ZTIN3tbb4taskE --- failed re-building ‘DatabionicSwarm.Rmd’ SUMMARY: processing the following file failed: ‘DatabionicSwarm.Rmd’ Error: Vignette re-building failed. Execution halted Package: FuncDiv Check: whether package can be installed New result: ERROR Installation failed. Package: NNS Check: whether package can be installed New result: ERROR Installation failed. Package: qs2 Check: whether package can be installed New result: ERROR Installation failed. Package: Ravages Check: whether package can be installed New result: ERROR Installation failed. Package: Rfast2 Check: whether package can be installed New result: ERROR Installation failed. Package: rNeighborGWAS Check: whether package can be installed New result: ERROR Installation failed. Package: rxode2 Check: whether package can be installed New result: ERROR Installation failed. Package: scistreer Check: whether package can be installed New result: ERROR Installation failed.